RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 AMPHP49418 695 aa18.88■□□□□ 0.61
COPS3-214ENST00000577246 ZCRB1Q8TBF4 217 aaKnown RBP18.88■□□□□ 0.61
COPS3-214ENST00000577246 CCNL1Q9UK58 526 aaPredicted RBP18.88■□□□□ 0.61
COPS3-214ENST00000577246 MSH5O43196 834 aa18.87■□□□□ 0.61
COPS3-214ENST00000577246 SLC24A1O60721 1099 aa18.87■□□□□ 0.61
COPS3-214ENST00000577246 USP47Q96K76 1375 aa18.86■□□□□ 0.61
COPS3-214ENST00000577246 CGNL1Q0VF96 1302 aa18.86■□□□□ 0.61
COPS3-214ENST00000577246 MAP3K19Q56UN5 1328 aa18.85■□□□□ 0.61
COPS3-214ENST00000577246 HOXC9P31274 260 aa18.85■□□□□ 0.61
COPS3-214ENST00000577246 NLGN2Q8NFZ4 835 aa18.85■□□□□ 0.61
COPS3-214ENST00000577246 COL24A1Q17RW2 1714 aa18.85■□□□□ 0.61
COPS3-214ENST00000577246 RTL1A6NKG5 1358 aa18.84■□□□□ 0.61
COPS3-214ENST00000577246 NSD2O96028 1365 aa18.84■□□□□ 0.61
COPS3-214ENST00000577246 KCNQ4P56696 695 aa18.84■□□□□ 0.61
COPS3-214ENST00000577246 SMG6Q86US8 1419 aaKnown RBP18.83■□□□□ 0.6
COPS3-214ENST00000577246 FLAD1Q8NFF5 587 aa18.82■□□□□ 0.6
COPS3-214ENST00000577246 DOT1LQ8TEK3 1739 aa18.82■□□□□ 0.6
COPS3-214ENST00000577246 LY75O60449 1722 aa18.81■□□□□ 0.6
COPS3-214ENST00000577246 RAPGEF4Q8WZA2 1011 aa18.81■□□□□ 0.6
COPS3-214ENST00000577246 KAT6BQ8WYB5 2073 aa18.81■□□□□ 0.6
COPS3-214ENST00000577246 MEGF6O75095 1541 aa18.8■□□□□ 0.6
COPS3-214ENST00000577246 COL23A1Q86Y22 540 aaPredicted RBP18.8■□□□□ 0.6
COPS3-214ENST00000577246 YBX3P16989 372 aaKnown RBP eCLIP18.79■□□□□ 0.66e-7■■■■□ 21.6
COPS3-214ENST00000577246 CD2APQ9Y5K6 639 aa18.79■□□□□ 0.6
COPS3-214ENST00000577246 SHANK3Q9BYB0 1731 aa18.79■□□□□ 0.6
COPS3-214ENST00000577246 TONSLQ96HA7 1378 aa18.79■□□□□ 0.6
COPS3-214ENST00000577246 IFFO2Q5TF58 517 aa18.78■□□□□ 0.6
COPS3-214ENST00000577246 GOLGB1Q14789 3259 aaKnown RBP18.78■□□□□ 0.6
COPS3-214ENST00000577246 PCDH11XQ9BZA7 1347 aa18.77■□□□□ 0.6
COPS3-214ENST00000577246 PCDH11YQ9BZA8 1340 aa18.77■□□□□ 0.6
COPS3-214ENST00000577246 TUBGCP6Q96RT7 1819 aa18.77■□□□□ 0.6
COPS3-214ENST00000577246 TATP17735 454 aaPredicted RBP18.77■□□□□ 0.6
COPS3-214ENST00000577246 MSL1Q68DK7 614 aa18.76■□□□□ 0.59
COPS3-214ENST00000577246 ATP10DQ9P241 1426 aa18.75■□□□□ 0.59
COPS3-214ENST00000577246 NBPF6Q5VWK0 638 aa18.75■□□□□ 0.59
COPS3-214ENST00000577246 NBPF4Q96M43 638 aa18.75■□□□□ 0.59
COPS3-214ENST00000577246 GPBP1L1Q9HC44 474 aaPredicted RBP18.75■□□□□ 0.59
COPS3-214ENST00000577246 NSD3Q9BZ95 1437 aa18.74■□□□□ 0.59
COPS3-214ENST00000577246 PALLDQ8WX93 1383 aa18.74■□□□□ 0.59
COPS3-214ENST00000577246 TESK2Q96S53 571 aa18.74■□□□□ 0.59
COPS3-214ENST00000577246 RRS1Q15050 365 aaKnown RBP18.73■□□□□ 0.59
COPS3-214ENST00000577246 SMARCC1Q92922 1105 aaPredicted RBP18.73■□□□□ 0.59
COPS3-214ENST00000577246 KIF24Q5T7B8 1368 aa18.72■□□□□ 0.59
COPS3-214ENST00000577246 ST20-MTHFSA0A0A6YYL1 179 aa18.72■□□□□ 0.59
COPS3-214ENST00000577246 FBLN1P23142 703 aa18.72■□□□□ 0.59
COPS3-214ENST00000577246 USHBP1Q8N6Y0 703 aa18.72■□□□□ 0.59
COPS3-214ENST00000577246 AK7Q96M32 723 aa18.72■□□□□ 0.59
COPS3-214ENST00000577246 INSRP06213 1382 aa18.71■□□□□ 0.59
COPS3-214ENST00000577246 FLT4P35916 1363 aa18.7■□□□□ 0.58
COPS3-214ENST00000577246 C5P01031 1676 aa18.7■□□□□ 0.58
COPS3-214ENST00000577246 FYB1O15117 783 aa18.7■□□□□ 0.58
COPS3-214ENST00000577246 MPRIPQ6WCQ1 1025 aa18.7■□□□□ 0.58
COPS3-214ENST00000577246 GGNBP2Q9H3C7 697 aa18.69■□□□□ 0.58
COPS3-214ENST00000577246 TMF1P82094 1093 aa18.68■□□□□ 0.58
COPS3-214ENST00000577246 ADCY9O60503 1353 aa18.68■□□□□ 0.58
COPS3-214ENST00000577246 RGPD2P0DJD1 1756 aa18.66■□□□□ 0.58
COPS3-214ENST00000577246 HSPA6P17066 643 aa18.66■□□□□ 0.58
COPS3-214ENST00000577246 SSFA2P28290 1259 aa18.66■□□□□ 0.58
COPS3-214ENST00000577246 CDCA8Q53HL2 280 aa18.66■□□□□ 0.58
COPS3-214ENST00000577246 HSP90AB2PQ58FF8 381 aa18.66■□□□□ 0.58
COPS3-214ENST00000577246 CYP27B1O15528 508 aa18.65■□□□□ 0.58
COPS3-214ENST00000577246 IGSF1Q8N6C5 1336 aa18.65■□□□□ 0.58
COPS3-214ENST00000577246 C4BP0C0L5 1744 aa18.64■□□□□ 0.57
COPS3-214ENST00000577246 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.64■□□□□ 0.57
COPS3-214ENST00000577246 PHF14O94880 888 aa18.64■□□□□ 0.57
COPS3-214ENST00000577246 ZNF526Q8TF50 670 aaPredicted RBP18.64■□□□□ 0.57
COPS3-214ENST00000577246 SPG7Q9UQ90 795 aa18.64■□□□□ 0.57
COPS3-214ENST00000577246 CEP350Q5VT06 3117 aa18.63■□□□□ 0.57
COPS3-214ENST00000577246 LOC102724428A0A0B4J2F2 783 aa18.61■□□□□ 0.57
COPS3-214ENST00000577246 SIK1P57059 783 aa18.61■□□□□ 0.57
COPS3-214ENST00000577246 NKX1-1Q15270 411 aaPredicted RBP18.61■□□□□ 0.57
COPS3-214ENST00000577246 PIGBQ92521 554 aa18.61■□□□□ 0.57
COPS3-214ENST00000577246 TMOD3Q9NYL9 352 aa18.6■□□□□ 0.57
COPS3-214ENST00000577246 TAF1LQ8IZX4 1826 aa18.6■□□□□ 0.57
COPS3-214ENST00000577246 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.59■□□□□ 0.57
COPS3-214ENST00000577246 GNPATO15228 680 aa18.58■□□□□ 0.56
COPS3-214ENST00000577246 NCAPD2Q15021 1401 aa18.57■□□□□ 0.56
COPS3-214ENST00000577246 PKD1L3Q7Z443 1732 aa18.57■□□□□ 0.56
COPS3-214ENST00000577246 AMIGO3Q86WK7 504 aa18.57■□□□□ 0.56
COPS3-214ENST00000577246 LINC00116Q8NCU8 138 aa18.57■□□□□ 0.56
COPS3-214ENST00000577246 TOGARAM1Q9Y4F4 1720 aa18.57■□□□□ 0.56
COPS3-214ENST00000577246 PPM1GO15355 546 aaPredicted RBP18.56■□□□□ 0.56
COPS3-214ENST00000577246 ATP6V1AP38606 617 aa18.56■□□□□ 0.56
COPS3-214ENST00000577246 WWC3Q9ULE0 1092 aa18.56■□□□□ 0.56
COPS3-214ENST00000577246 EMILIN1Q9Y6C2 1016 aa18.56■□□□□ 0.56
COPS3-214ENST00000577246 KIF20BQ96Q89 1820 aa18.56■□□□□ 0.56
COPS3-214ENST00000577246 IFNL2Q8IZJ0 200 aa18.55■□□□□ 0.56
COPS3-214ENST00000577246 PLEKHG2Q9H7P9 1386 aa18.55■□□□□ 0.56
COPS3-214ENST00000577246 UBR3Q6ZT12 1888 aa18.54■□□□□ 0.56
COPS3-214ENST00000577246 MMP10P09238 476 aa18.54■□□□□ 0.56
COPS3-214ENST00000577246 APLP1P51693 650 aa18.54■□□□□ 0.56
COPS3-214ENST00000577246 TGFB2P61812 414 aa18.54■□□□□ 0.56
COPS3-214ENST00000577246 WASHC2AQ641Q2 1341 aa18.53■□□□□ 0.56
COPS3-214ENST00000577246 CICQ96RK0 1608 aaPredicted RBP18.53■□□□□ 0.56
COPS3-214ENST00000577246 KIF3CO14782 793 aa18.53■□□□□ 0.56
COPS3-214ENST00000577246 NLGN1Q8N2Q7 840 aa18.53■□□□□ 0.56
COPS3-214ENST00000577246 ASAP1Q9ULH1 1129 aa18.53■□□□□ 0.56
COPS3-214ENST00000577246 ITGB4P16144 1822 aa18.53■□□□□ 0.56
COPS3-214ENST00000577246 PHKG2P15735 406 aa18.52■□□□□ 0.56
COPS3-214ENST00000577246 ITPK1Q13572 414 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms