RNA–Protein interactions for RNA: ENST00000577185.1

TTC39C-204, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 3 BASIC

Gene TTC39C, Length 533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-204ENST00000577185 C14orf93Q9H972 538 aaKnown RBP10.13□□□□□ -0.79
TTC39C-204ENST00000577185 TSR3Q9UJK0 312 aaKnown RBP10.13□□□□□ -0.79
TTC39C-204ENST00000577185 PIK3C2GO75747 1445 aa10.13□□□□□ -0.79
TTC39C-204ENST00000577185 YTHDC2Q9H6S0 1430 aaKnown RBP10.13□□□□□ -0.79
TTC39C-204ENST00000577185 DHX57Q6P158 1386 aaKnown RBP10.13□□□□□ -0.79
TTC39C-204ENST00000577185 HAP1P54257 671 aaPredicted RBP10.12□□□□□ -0.79
TTC39C-204ENST00000577185 COL9A1P20849 921 aa10.1□□□□□ -0.79
TTC39C-204ENST00000577185 CFAP70Q5T0N1 1121 aa10.1□□□□□ -0.79
TTC39C-204ENST00000577185 PPP1R18Q6NYC8 613 aa10.1□□□□□ -0.79
TTC39C-204ENST00000577185 KIAA1468Q9P260 1216 aa10.1□□□□□ -0.79
TTC39C-204ENST00000577185 HPS5Q9UPZ3 1129 aa10.1□□□□□ -0.79
TTC39C-204ENST00000577185 SLIT2O94813 1529 aa10.1□□□□□ -0.79
TTC39C-204ENST00000577185 VPS72Q15906 364 aa10.09□□□□□ -0.79
TTC39C-204ENST00000577185 LCE2AQ5TA79 106 aaPredicted RBP10.09□□□□□ -0.79
TTC39C-204ENST00000577185 TREML4Q6UXN2 200 aa10.09□□□□□ -0.79
TTC39C-204ENST00000577185 CABLES1Q8TDN4 633 aa10.09□□□□□ -0.79
TTC39C-204ENST00000577185 POGKQ9P215 609 aa10.09□□□□□ -0.79
TTC39C-204ENST00000577185 SBNO1A3KN83 1393 aa10.09□□□□□ -0.79
TTC39C-204ENST00000577185 RALGAPBQ86X10 1494 aa10.09□□□□□ -0.79
TTC39C-204ENST00000577185 KIF1AQ12756 1690 aa10.09□□□□□ -0.79
TTC39C-204ENST00000577185 BLMP54132 1417 aaPredicted RBP10.08□□□□□ -0.8
TTC39C-204ENST00000577185 TNS3Q68CZ2 1445 aa10.08□□□□□ -0.8
TTC39C-204ENST00000577185 KNDC1Q76NI1 1749 aa10.08□□□□□ -0.8
TTC39C-204ENST00000577185 LOC100996750A0A140TA64 210 aa10.08□□□□□ -0.8
TTC39C-204ENST00000577185 EVI5O60447 810 aa10.08□□□□□ -0.8
TTC39C-204ENST00000577185 SF3B2Q13435 895 aaKnown RBP10.08□□□□□ -0.8
TTC39C-204ENST00000577185 SAFB2Q14151 953 aaKnown RBP eCLIP10.08□□□□□ -0.8
TTC39C-204ENST00000577185 LMOD2Q6P5Q4 547 aa10.08□□□□□ -0.8
TTC39C-204ENST00000577185 SEPT12Q8IYM1 358 aa10.08□□□□□ -0.8
TTC39C-204ENST00000577185 PRAM1Q96QH2 718 aa10.08□□□□□ -0.8
TTC39C-204ENST00000577185 KRTAP4-6Q9BYQ5 205 aa10.08□□□□□ -0.8
TTC39C-204ENST00000577185 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.08□□□□□ -0.8
TTC39C-204ENST00000577185 CCDC9Q9Y3X0 531 aaKnown RBP10.08□□□□□ -0.8
TTC39C-204ENST00000577185 ARHGEF10O15013 1369 aa10.08□□□□□ -0.8
TTC39C-204ENST00000577185 FMN2Q9NZ56 1722 aa10.07□□□□□ -0.8
TTC39C-204ENST00000577185 NRXN1Q9ULB1 1477 aa10.07□□□□□ -0.8
TTC39C-204ENST00000577185 TJAP1Q5JTD0 557 aa10.07□□□□□ -0.8
TTC39C-204ENST00000577185 IFT172Q9UG01 1749 aa10.07□□□□□ -0.8
TTC39C-204ENST00000577185 MARF1Q9Y4F3 1742 aaKnown RBP10.07□□□□□ -0.8
TTC39C-204ENST00000577185 POTECB2RU33 542 aa10.06□□□□□ -0.8
TTC39C-204ENST00000577185 ONECUT3O60422 494 aaPredicted RBP10.06□□□□□ -0.8
TTC39C-204ENST00000577185 PMFBP1Q8TBY8 1022 aa10.06□□□□□ -0.8
TTC39C-204ENST00000577185 SEPT9Q9UHD8 586 aaPredicted RBP10.06□□□□□ -0.8
TTC39C-204ENST00000577185 ANKARQ7Z5J8 1434 aa10.06□□□□□ -0.8
TTC39C-204ENST00000577185 GLI3P10071 1580 aa10.05□□□□□ -0.8
TTC39C-204ENST00000577185 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.05□□□□□ -0.8
TTC39C-204ENST00000577185 USP32Q8NFA0 1604 aa10.05□□□□□ -0.8
TTC39C-204ENST00000577185 FAM83GA6ND36 823 aa10.05□□□□□ -0.8
TTC39C-204ENST00000577185 KRT27Q7Z3Y8 459 aa10.05□□□□□ -0.8
TTC39C-204ENST00000577185 LRCH3Q96II8 777 aa10.05□□□□□ -0.8
TTC39C-204ENST00000577185 DEFB132Q7Z7B7 95 aa10.04□□□□□ -0.8
TTC39C-204ENST00000577185 TRAK1Q9UPV9 953 aa10.04□□□□□ -0.8
TTC39C-204ENST00000577185 EIF3AQ14152 1382 aaKnown RBP10.03□□□□□ -0.8
TTC39C-204ENST00000577185 GPRASP1Q5JY77 1395 aa10.03□□□□□ -0.8
TTC39C-204ENST00000577185 DLC1Q96QB1 1528 aa10.03□□□□□ -0.8
TTC39C-204ENST00000577185 MYT1Q01538 1121 aa10.03□□□□□ -0.8
TTC39C-204ENST00000577185 FAM98CQ17RN3 349 aaKnown RBP10.03□□□□□ -0.8
TTC39C-204ENST00000577185 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.03□□□□□ -0.8
TTC39C-204ENST00000577185 MINK1Q8N4C8 1332 aaPredicted RBP10.03□□□□□ -0.8
TTC39C-204ENST00000577185 WASLO00401 505 aaPredicted RBP10.02□□□□□ -0.81
TTC39C-204ENST00000577185 HIRIP3Q9BW71 556 aaPredicted RBP10.02□□□□□ -0.81
TTC39C-204ENST00000577185 BTG4Q9NY30 223 aa10.02□□□□□ -0.81
TTC39C-204ENST00000577185 KDM2AQ9Y2K7 1162 aa10.02□□□□□ -0.81
TTC39C-204ENST00000577185 BAG6P46379 1132 aa10.01□□□□□ -0.81
TTC39C-204ENST00000577185 PPP1R15BQ5SWA1 713 aa10.01□□□□□ -0.81
TTC39C-204ENST00000577185 NGDNQ8NEJ9 315 aaKnown RBP10.01□□□□□ -0.81
TTC39C-204ENST00000577185 DCAF11Q8TEB1 546 aa10.01□□□□□ -0.81
TTC39C-204ENST00000577185 PCDHGA10Q9Y5H3 936 aa10.01□□□□□ -0.81
TTC39C-204ENST00000577185 RAB3GAP2Q9H2M9 1393 aa10.01□□□□□ -0.81
TTC39C-204ENST00000577185 PRR36Q9H6K5 1346 aa10□□□□□ -0.81
TTC39C-204ENST00000577185 NWD2Q9ULI1 1742 aa9.99□□□□□ -0.81
TTC39C-204ENST00000577185 STK17AQ9UEE5 414 aa9.99□□□□□ -0.81
TTC39C-204ENST00000577185 ADGRB1O14514 1584 aa9.99□□□□□ -0.81
TTC39C-204ENST00000577185 ADGRB2O60241 1585 aa9.99□□□□□ -0.81
TTC39C-204ENST00000577185 TULP4Q9NRJ4 1543 aa9.98□□□□□ -0.81
TTC39C-204ENST00000577185 PPP4CP60510 307 aa9.98□□□□□ -0.81
TTC39C-204ENST00000577185 IL21Q9HBE4 155 aa9.98□□□□□ -0.81
TTC39C-204ENST00000577185 PRDM11Q9NQV5 511 aa9.98□□□□□ -0.81
TTC39C-204ENST00000577185 PLCH1Q4KWH8 1693 aa9.98□□□□□ -0.81
TTC39C-204ENST00000577185 SPATA31A5Q5VU36 1347 aa9.98□□□□□ -0.81
TTC39C-204ENST00000577185 SPATA31A7Q8IWB4 1347 aa9.98□□□□□ -0.81
TTC39C-204ENST00000577185 RGPD8O14715 1765 aaPredicted RBP9.98□□□□□ -0.81
TTC39C-204ENST00000577185 PKDCCQ504Y2 493 aa9.97□□□□□ -0.81
TTC39C-204ENST00000577185 NUDT16Q96DE0 195 aaKnown RBP9.97□□□□□ -0.81
TTC39C-204ENST00000577185 MTRQ99707 1265 aa9.97□□□□□ -0.81
TTC39C-204ENST00000577185 CRISPLD2Q9H0B8 497 aa9.97□□□□□ -0.81
TTC39C-204ENST00000577185 EN1Q05925 392 aaPredicted RBP9.96□□□□□ -0.82
TTC39C-204ENST00000577185 ABCA3Q99758 1704 aa9.96□□□□□ -0.82
TTC39C-204ENST00000577185 BRWD3Q6RI45 1802 aa9.96□□□□□ -0.82
TTC39C-204ENST00000577185 DGAT1O75907 488 aa9.95□□□□□ -0.82
TTC39C-204ENST00000577185 HRCP23327 699 aa9.95□□□□□ -0.82
TTC39C-204ENST00000577185 FBXW7Q969H0 707 aa9.95□□□□□ -0.82
TTC39C-204ENST00000577185 TRPM3Q9HCF6 1732 aaPredicted RBP9.95□□□□□ -0.82
TTC39C-204ENST00000577185 COL14A1Q05707 1796 aaKnown RBP9.95□□□□□ -0.82
TTC39C-204ENST00000577185 ALS2Q96Q42 1657 aa9.94□□□□□ -0.82
TTC39C-204ENST00000577185 KIAA0232Q92628 1395 aa9.94□□□□□ -0.82
TTC39C-204ENST00000577185 SPATA31A1Q5TZJ5 1347 aa9.94□□□□□ -0.82
TTC39C-204ENST00000577185 TRIM6-TRIM34B2RNG4 842 aa9.94□□□□□ -0.82
TTC39C-204ENST00000577185 FAM182BQ5T319 152 aa9.94□□□□□ -0.82
TTC39C-204ENST00000577185 TYW1BQ6NUM6 668 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms