RNA–Protein interactions for RNA: ENST00000577134.1

SPOP-222, Transcript of speckle type BTB/POZ protein, human

TSL 2

Gene SPOP, Length 421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOP-222	ENST00000577134	PLEKHF1	Q96S99	279 aa		13.22	□□□□□ -0.29
SPOP-222	ENST00000577134	PHACTR3	Q96KR7	559 aa		13.21	□□□□□ -0.29
SPOP-222	ENST00000577134	THSD7A	Q9UPZ6	1657 aa		13.21	□□□□□ -0.3
SPOP-222	ENST00000577134		A0A0G2JS52	829 aa		13.2	□□□□□ -0.3
SPOP-222	ENST00000577134	ONECUT3	O60422	494 aa	Predicted RBP	13.2	□□□□□ -0.3
SPOP-222	ENST00000577134	MYT1	Q01538	1121 aa		13.2	□□□□□ -0.3
SPOP-222	ENST00000577134	RUNDC1	Q96C34	613 aa		13.2	□□□□□ -0.3
SPOP-222	ENST00000577134	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.2	□□□□□ -0.3
SPOP-222	ENST00000577134	PNN	Q9H307	717 aa	Known RBP	13.2	□□□□□ -0.3
SPOP-222	ENST00000577134	OVOS2	A0A0G2JMS6	1433 aa		13.2	□□□□□ -0.3
SPOP-222	ENST00000577134	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.19	□□□□□ -0.3
SPOP-222	ENST00000577134	SEPT12	Q8IYM1	358 aa		13.19	□□□□□ -0.3
SPOP-222	ENST00000577134	ZCRB1	Q8TBF4	217 aa	Known RBP	13.19	□□□□□ -0.3
SPOP-222	ENST00000577134	LRRC37A3	O60309	1634 aa		13.19	□□□□□ -0.3
SPOP-222	ENST00000577134	PKD1L3	Q7Z443	1732 aa		13.19	□□□□□ -0.3
SPOP-222	ENST00000577134	SHANK3	Q9BYB0	1731 aa		13.19	□□□□□ -0.3
SPOP-222	ENST00000577134	MAPK8IP3	Q9UPT6	1336 aa		13.18	□□□□□ -0.3
SPOP-222	ENST00000577134	SENP3-EIF4A1	A0A087X0R7	540 aa		13.18	□□□□□ -0.3
SPOP-222	ENST00000577134	EXOC5	O00471	708 aa		13.18	□□□□□ -0.3
SPOP-222	ENST00000577134	NEFM	P07197	916 aa		13.18	□□□□□ -0.3
SPOP-222	ENST00000577134	DDB1	Q16531	1140 aa		13.18	□□□□□ -0.3
SPOP-222	ENST00000577134	MTHFSD	Q2M296	383 aa	Known RBP	13.18	□□□□□ -0.3
SPOP-222	ENST00000577134	SPG7	Q9UQ90	795 aa		13.18	□□□□□ -0.3
SPOP-222	ENST00000577134	AMOT	Q4VCS5	1084 aa		13.17	□□□□□ -0.3
SPOP-222	ENST00000577134	DDX54	Q8TDD1	881 aa	Known RBP	13.17	□□□□□ -0.3
SPOP-222	ENST00000577134	BRWD3	Q6RI45	1802 aa		13.17	□□□□□ -0.3
SPOP-222	ENST00000577134	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.16	□□□□□ -0.3
SPOP-222	ENST00000577134	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.16	□□□□□ -0.3
SPOP-222	ENST00000577134	RGS12	O14924	1447 aa		13.15	□□□□□ -0.3
SPOP-222	ENST00000577134	TNS2	Q63HR2	1409 aa		13.15	□□□□□ -0.3
SPOP-222	ENST00000577134	APAF1	O14727	1248 aa		13.15	□□□□□ -0.3
SPOP-222	ENST00000577134	GAS2L2	Q8NHY3	880 aa		13.15	□□□□□ -0.3
SPOP-222	ENST00000577134	RRP7A	Q9Y3A4	280 aa	Known RBP	13.15	□□□□□ -0.3
SPOP-222	ENST00000577134	PLEKHG2	Q9H7P9	1386 aa		13.15	□□□□□ -0.3
SPOP-222	ENST00000577134	DLG5	Q8TDM6	1919 aa		13.15	□□□□□ -0.3
SPOP-222	ENST00000577134	PCDH11X	Q9BZA7	1347 aa		13.14	□□□□□ -0.31
SPOP-222	ENST00000577134	PCDH11Y	Q9BZA8	1340 aa		13.14	□□□□□ -0.31
SPOP-222	ENST00000577134	CYP27B1	O15528	508 aa		13.14	□□□□□ -0.31
SPOP-222	ENST00000577134	TMPO	P42166	694 aa	Known RBP	13.14	□□□□□ -0.31
SPOP-222	ENST00000577134	PDE3B	Q13370	1112 aa		13.14	□□□□□ -0.31
SPOP-222	ENST00000577134	NEUROD2	Q15784	382 aa		13.14	□□□□□ -0.31
SPOP-222	ENST00000577134	NFE2L2	Q16236	605 aa		13.14	□□□□□ -0.31
SPOP-222	ENST00000577134	MARCH10	Q8NA82	808 aa	Predicted RBP	13.14	□□□□□ -0.31
SPOP-222	ENST00000577134	PHKG2	P15735	406 aa		13.13	□□□□□ -0.31
SPOP-222	ENST00000577134	RIPK4	P57078	832 aa		13.13	□□□□□ -0.31
SPOP-222	ENST00000577134	C1orf141	Q5JVX7	400 aa		13.13	□□□□□ -0.31
SPOP-222	ENST00000577134	IFNL2	Q8IZJ0	200 aa		13.13	□□□□□ -0.31
SPOP-222	ENST00000577134	AKAP4	Q5JQC9	854 aa		13.12	□□□□□ -0.31
SPOP-222	ENST00000577134	FAM182B	Q5T319	152 aa		13.12	□□□□□ -0.31
SPOP-222	ENST00000577134	KRT27	Q7Z3Y8	459 aa		13.12	□□□□□ -0.31
SPOP-222	ENST00000577134	VIRMA	Q69YN4	1812 aa	Known RBP	13.11	□□□□□ -0.31
SPOP-222	ENST00000577134	MAP3K5	Q99683	1374 aa		13.11	□□□□□ -0.31
SPOP-222	ENST00000577134	GNAT3	A8MTJ3	354 aa		13.11	□□□□□ -0.31
SPOP-222	ENST00000577134	MPRIP	Q6WCQ1	1025 aa		13.11	□□□□□ -0.31
SPOP-222	ENST00000577134	SALL2	Q9Y467	1007 aa	Predicted RBP	13.11	□□□□□ -0.31
SPOP-222	ENST00000577134	NKX1-1	Q15270	411 aa	Predicted RBP	13.1	□□□□□ -0.31
SPOP-222	ENST00000577134	LGR6	Q9HBX8	967 aa		13.1	□□□□□ -0.31
SPOP-222	ENST00000577134	KDM6A	O15550	1401 aa	Predicted RBP	13.09	□□□□□ -0.31
SPOP-222	ENST00000577134	HSP90AB1	P08238	724 aa	Known RBP	13.09	□□□□□ -0.31
SPOP-222	ENST00000577134	DCTN1	Q14203	1278 aa		13.09	□□□□□ -0.31
SPOP-222	ENST00000577134	MCM10	Q7L590	875 aa		13.09	□□□□□ -0.31
SPOP-222	ENST00000577134	TRIM35	Q9UPQ4	493 aa		13.09	□□□□□ -0.31
SPOP-222	ENST00000577134	SCN11A	Q9UI33	1791 aa		13.09	□□□□□ -0.31
SPOP-222	ENST00000577134	TOGARAM1	Q9Y4F4	1720 aa		13.08	□□□□□ -0.32
SPOP-222	ENST00000577134	RNMT	O43148	476 aa	Known RBP	13.08	□□□□□ -0.32
SPOP-222	ENST00000577134	IL17RE	Q8NFR9	667 aa		13.08	□□□□□ -0.32
SPOP-222	ENST00000577134	RTF1	Q92541	710 aa	Known RBP	13.08	□□□□□ -0.32
SPOP-222	ENST00000577134	DCAF5	Q96JK2	942 aa		13.08	□□□□□ -0.32
SPOP-222	ENST00000577134	THUMPD2	Q9BTF0	503 aa	Known RBP	13.08	□□□□□ -0.32
SPOP-222	ENST00000577134	DOT1L	Q8TEK3	1739 aa		13.08	□□□□□ -0.32
SPOP-222	ENST00000577134	HTATSF1	O43719	755 aa	Known RBP	13.07	□□□□□ -0.32
SPOP-222	ENST00000577134	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.07	□□□□□ -0.32
SPOP-222	ENST00000577134	LMOD3	Q0VAK6	560 aa		13.07	□□□□□ -0.32
SPOP-222	ENST00000577134	ACSBG1	Q96GR2	724 aa		13.07	□□□□□ -0.32
SPOP-222	ENST00000577134	ADAMTS7	Q9UKP4	1686 aa		13.07	□□□□□ -0.32
SPOP-222	ENST00000577134	ITGB4	P16144	1822 aa		13.06	□□□□□ -0.32
SPOP-222	ENST00000577134	SBF2	Q86WG5	1849 aa		13.06	□□□□□ -0.32
SPOP-222	ENST00000577134	KAT6B	Q8WYB5	2073 aa		13.06	□□□□□ -0.32
SPOP-222	ENST00000577134	CCDC27	Q2M243	656 aa		13.05	□□□□□ -0.32
SPOP-222	ENST00000577134	NCBP3	Q53F19	620 aa	Known RBP	13.05	□□□□□ -0.32
SPOP-222	ENST00000577134	FAM196A	Q6ZSG2	479 aa		13.05	□□□□□ -0.32
SPOP-222	ENST00000577134	YTHDC1	Q96MU7	727 aa	Known RBP	13.05	□□□□□ -0.32
SPOP-222	ENST00000577134	CEMIP	Q8WUJ3	1361 aa		13.05	□□□□□ -0.32
SPOP-222	ENST00000577134	ERVV-2	B6SEH9	535 aa		13.04	□□□□□ -0.32
SPOP-222	ENST00000577134	KCNQ2	O43526	872 aa		13.04	□□□□□ -0.32
SPOP-222	ENST00000577134	PRIM1	P49642	420 aa	Known RBP	13.04	□□□□□ -0.32
SPOP-222	ENST00000577134	CABP4	P57796	275 aa		13.04	□□□□□ -0.32
SPOP-222	ENST00000577134	WWC1	Q8IX03	1113 aa		13.04	□□□□□ -0.32
SPOP-222	ENST00000577134	NGEF	Q8N5V2	710 aa		13.04	□□□□□ -0.32
SPOP-222	ENST00000577134	SYTL4	Q96C24	671 aa	Predicted RBP	13.04	□□□□□ -0.32
SPOP-222	ENST00000577134	BCL9	O00512	1426 aa		13.04	□□□□□ -0.32
SPOP-222	ENST00000577134	SIPA1L3	O60292	1781 aa	Predicted RBP	13.03	□□□□□ -0.32
SPOP-222	ENST00000577134	PTF1A	Q7RTS3	328 aa		13.03	□□□□□ -0.32
SPOP-222	ENST00000577134	NFATC2IP	Q8NCF5	419 aa		13.03	□□□□□ -0.32
SPOP-222	ENST00000577134	SLC52A2	Q9HAB3	445 aa		13.03	□□□□□ -0.32
SPOP-222	ENST00000577134	NHS	Q6T4R5	1651 aa		13.02	□□□□□ -0.32
SPOP-222	ENST00000577134	TEF	Q10587	303 aa		13.02	□□□□□ -0.33
SPOP-222	ENST00000577134	TMOD3	Q9NYL9	352 aa		13.02	□□□□□ -0.33
SPOP-222	ENST00000577134	MRC1	P22897	1456 aa		13.02	□□□□□ -0.33
SPOP-222	ENST00000577134	TRIM37	O94972	964 aa		13.01	□□□□□ -0.33

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