RNA–Protein interactions for RNA: ENST00000575830.2

CDC27-218, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-218ENST00000575830 SENP2Q9HC62 589 aa6.88□□□□□ -1.31
CDC27-218ENST00000575830 PPP1R12CQ9BZL4 782 aa6.87□□□□□ -1.31
CDC27-218ENST00000575830 PCDHGA11Q9Y5H2 935 aa6.87□□□□□ -1.31
CDC27-218ENST00000575830 WASLO00401 505 aaPredicted RBP6.86□□□□□ -1.31
CDC27-218ENST00000575830 GNRH1P01148 92 aa6.86□□□□□ -1.31
CDC27-218ENST00000575830 SKIP12755 728 aa6.86□□□□□ -1.31
CDC27-218ENST00000575830 SCARF1Q14162 830 aa6.86□□□□□ -1.31
CDC27-218ENST00000575830 C14orf37Q86TY3 774 aa6.86□□□□□ -1.31
CDC27-218ENST00000575830 SIRT1Q96EB6 747 aa6.86□□□□□ -1.31
CDC27-218ENST00000575830 CALR3Q96L12 384 aaKnown RBP6.86□□□□□ -1.31
CDC27-218ENST00000575830 AGBL1Q96MI9 1066 aa6.86□□□□□ -1.31
CDC27-218ENST00000575830 TFIP11Q9UBB9 837 aaKnown RBP6.86□□□□□ -1.31
CDC27-218ENST00000575830 MAFBQ9Y5Q3 323 aaPredicted RBP6.86□□□□□ -1.31
CDC27-218ENST00000575830 PALM3A6NDB9 673 aaPredicted RBP6.85□□□□□ -1.31
CDC27-218ENST00000575830 USP17L5A8MUK1 530 aa6.85□□□□□ -1.31
CDC27-218ENST00000575830 ATP5J2-PTCD1G3V325 749 aa6.85□□□□□ -1.31
CDC27-218ENST00000575830 DKK1O94907 266 aa6.85□□□□□ -1.31
CDC27-218ENST00000575830 SNRPBP14678 240 aaKnown RBP6.85□□□□□ -1.31
CDC27-218ENST00000575830 SRPK2P78362 688 aaKnown RBP6.85□□□□□ -1.31
CDC27-218ENST00000575830 CFAP70Q5T0N1 1121 aa6.85□□□□□ -1.31
CDC27-218ENST00000575830 CYP2U1Q7Z449 544 aa6.85□□□□□ -1.31
CDC27-218ENST00000575830 XAGE2Q96GT9 111 aa6.85□□□□□ -1.31
CDC27-218ENST00000575830 PURBQ96QR8 312 aaKnown RBP6.85□□□□□ -1.31
CDC27-218ENST00000575830 ZBTB7BO15156 539 aaPredicted RBP6.84□□□□□ -1.31
CDC27-218ENST00000575830 GPC1P35052 558 aa6.84□□□□□ -1.31
CDC27-218ENST00000575830 RNF144AP50876 292 aaPredicted RBP6.84□□□□□ -1.31
CDC27-218ENST00000575830 CLN3Q13286 438 aa6.84□□□□□ -1.31
CDC27-218ENST00000575830 ZNF787Q6DD87 383 aa6.84□□□□□ -1.31
CDC27-218ENST00000575830 C1orf115Q9H7X2 142 aa6.84□□□□□ -1.31
CDC27-218ENST00000575830 TIMELESSQ9UNS1 1208 aa6.84□□□□□ -1.31
CDC27-218ENST00000575830 A0A1W2PRU2 124 aa6.83□□□□□ -1.32
CDC27-218ENST00000575830 USP17L3A6NCW0 530 aa6.83□□□□□ -1.32
CDC27-218ENST00000575830 USP17L4A6NCW7 530 aa6.83□□□□□ -1.32
CDC27-218ENST00000575830 MYCP01106 439 aaPredicted RBP6.83□□□□□ -1.32
CDC27-218ENST00000575830 SCNN1DP51172 638 aa6.83□□□□□ -1.32
CDC27-218ENST00000575830 NCOA4Q13772 614 aa6.83□□□□□ -1.32
CDC27-218ENST00000575830 EML3Q32P44 896 aa6.83□□□□□ -1.32
CDC27-218ENST00000575830 KANK4Q5T7N3 995 aaPredicted RBP6.83□□□□□ -1.32
CDC27-218ENST00000575830 FOXD4L5Q5VV16 416 aaPredicted RBP6.83□□□□□ -1.32
CDC27-218ENST00000575830 USP17L2Q6R6M4 530 aa6.83□□□□□ -1.32
CDC27-218ENST00000575830 USP17L1Q7RTZ2 530 aa6.83□□□□□ -1.32
CDC27-218ENST00000575830 UPP2O95045 317 aa6.82□□□□□ -1.32
CDC27-218ENST00000575830 IL2RAP01589 272 aa6.82□□□□□ -1.32
CDC27-218ENST00000575830 BMP2P12643 396 aa6.82□□□□□ -1.32
CDC27-218ENST00000575830 CTSOP43234 321 aaPredicted RBP6.82□□□□□ -1.32
CDC27-218ENST00000575830 RELBQ01201 579 aa6.82□□□□□ -1.32
CDC27-218ENST00000575830 OXLD1Q5BKU9 147 aa6.82□□□□□ -1.32
CDC27-218ENST00000575830 SLC4A9Q96Q91 983 aa6.82□□□□□ -1.32
CDC27-218ENST00000575830 INSM2Q96T92 566 aaPredicted RBP6.82□□□□□ -1.32
CDC27-218ENST00000575830 FHDC1Q9C0D6 1143 aaPredicted RBP6.82□□□□□ -1.32
CDC27-218ENST00000575830 GRIP2Q9C0E4 1043 aa6.82□□□□□ -1.32
CDC27-218ENST00000575830 ZNF395Q9H8N7 513 aaPredicted RBP6.82□□□□□ -1.32
CDC27-218ENST00000575830 TMEM229AB2RXF0 380 aa6.81□□□□□ -1.32
CDC27-218ENST00000575830 C11orf95C9JLR9 678 aaPredicted RBP6.81□□□□□ -1.32
CDC27-218ENST00000575830 C6orf118Q5T5N4 469 aa6.81□□□□□ -1.32
CDC27-218ENST00000575830 RNF217Q8TC41 542 aa6.81□□□□□ -1.32
CDC27-218ENST00000575830 ESYT1Q9BSJ8 1104 aa6.81□□□□□ -1.32
CDC27-218ENST00000575830 DNMT3LQ9UJW3 386 aa6.81□□□□□ -1.32
CDC27-218ENST00000575830 NOD1Q9Y239 953 aa6.81□□□□□ -1.32
CDC27-218ENST00000575830 TTLL8A6PVC2 850 aa6.8□□□□□ -1.32
CDC27-218ENST00000575830 CLDN10P78369 228 aa6.8□□□□□ -1.32
CDC27-218ENST00000575830 ZNF295-AS1Q8N0V1 137 aa6.8□□□□□ -1.32
CDC27-218ENST00000575830 DEPDC4Q8N2C3 294 aa6.8□□□□□ -1.32
CDC27-218ENST00000575830 ETNK1Q9HBU6 452 aa6.8□□□□□ -1.32
CDC27-218ENST00000575830 MKRN1Q9UHC7 482 aaKnown RBP6.8□□□□□ -1.32
CDC27-218ENST00000575830 SPATA31C2B4DYI2 1134 aa6.79□□□□□ -1.32
CDC27-218ENST00000575830 INHAP05111 366 aa6.79□□□□□ -1.32
CDC27-218ENST00000575830 GTF2IP78347 998 aa6.79□□□□□ -1.32
CDC27-218ENST00000575830 TRIM50Q86XT4 487 aa6.79□□□□□ -1.32
CDC27-218ENST00000575830 SIX5Q8N196 739 aa6.79□□□□□ -1.32
CDC27-218ENST00000575830 LARGE2Q8N3Y3 721 aa6.79□□□□□ -1.32
CDC27-218ENST00000575830 ARHGEF10LQ9HCE6 1279 aa6.79□□□□□ -1.32
CDC27-218ENST00000575830 SERPINA10Q9UK55 444 aa6.79□□□□□ -1.32
CDC27-218ENST00000575830 CENPCQ03188 943 aa6.78□□□□□ -1.32
CDC27-218ENST00000575830 MTFR1Q15390 333 aa6.78□□□□□ -1.32
CDC27-218ENST00000575830 ESCO1Q5FWF5 840 aa6.78□□□□□ -1.32
CDC27-218ENST00000575830 WDR44Q5JSH3 913 aa6.78□□□□□ -1.32
CDC27-218ENST00000575830 CNKSR1Q969H4 720 aa6.78□□□□□ -1.32
CDC27-218ENST00000575830 KIAA1024Q9UPX6 916 aa6.78□□□□□ -1.32
CDC27-218ENST00000575830 ARID3CA6NKF2 412 aa6.77□□□□□ -1.33
CDC27-218ENST00000575830 M0R2N6 131 aa6.77□□□□□ -1.33
CDC27-218ENST00000575830 STAU1O95793 577 aaKnown RBP6.77□□□□□ -1.33
CDC27-218ENST00000575830 LMOD1P29536 600 aaPredicted RBP6.77□□□□□ -1.33
CDC27-218ENST00000575830 EPHA4P54764 986 aa6.77□□□□□ -1.33
CDC27-218ENST00000575830 GDF10P55107 478 aa6.77□□□□□ -1.33
CDC27-218ENST00000575830 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.77□□□□□ -1.33
CDC27-218ENST00000575830 LCE2AQ5TA79 106 aaPredicted RBP6.77□□□□□ -1.33
CDC27-218ENST00000575830 NPAS3Q8IXF0 933 aa6.77□□□□□ -1.33
CDC27-218ENST00000575830 SENP3-EIF4A1A0A087X0R7 540 aa6.76□□□□□ -1.33
CDC27-218ENST00000575830 FAM196BA6NMK8 535 aa6.76□□□□□ -1.33
CDC27-218ENST00000575830 ATP1A2P50993 1020 aa6.76□□□□□ -1.33
CDC27-218ENST00000575830 PTK7Q13308 1070 aa6.76□□□□□ -1.33
CDC27-218ENST00000575830 OGFOD1Q8N543 542 aa6.76□□□□□ -1.33
CDC27-218ENST00000575830 ESF1Q9H501 851 aaKnown RBP6.76□□□□□ -1.33
CDC27-218ENST00000575830 RAB6BQ9NRW1 208 aa6.76□□□□□ -1.33
CDC27-218ENST00000575830 DNAAF2Q9NVR5 837 aaKnown RBP6.76□□□□□ -1.33
CDC27-218ENST00000575830 IQSEC3Q9UPP2 1182 aaPredicted RBP6.76□□□□□ -1.33
CDC27-218ENST00000575830 SLC35F4A4IF30 521 aa6.75□□□□□ -1.33
CDC27-218ENST00000575830 SOBPA7XYQ1 873 aa6.75□□□□□ -1.33
CDC27-218ENST00000575830 SMTNP53814 917 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms