RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 MARCH10Q8NA82 808 aaPredicted RBP21.8■■□□□ 1.08
PFN1-203ENST00000574872 ZCRB1Q8TBF4 217 aaKnown RBP21.8■■□□□ 1.08
PFN1-203ENST00000574872 NUDCQ9Y266 331 aa21.8■■□□□ 1.08
PFN1-203ENST00000574872 EP400Q96L91 3159 aa21.8■■□□□ 1.08
PFN1-203ENST00000574872 DDX54Q8TDD1 881 aaKnown RBP21.79■■□□□ 1.08
PFN1-203ENST00000574872 KDRP35968 1356 aa21.78■■□□□ 1.08
PFN1-203ENST00000574872 U2AF1L5P0DN76 240 aaPredicted RBP21.77■■□□□ 1.08
PFN1-203ENST00000574872 U2AF1Q01081 240 aaKnown RBP eCLIP21.77■■□□□ 1.08
PFN1-203ENST00000574872 SHANK3Q9BYB0 1731 aa21.75■■□□□ 1.07
PFN1-203ENST00000574872 FAM196AQ6ZSG2 479 aa21.74■■□□□ 1.07
PFN1-203ENST00000574872 SPG7Q9UQ90 795 aa21.74■■□□□ 1.07
PFN1-203ENST00000574872 PCDH11XQ9BZA7 1347 aa21.74■■□□□ 1.07
PFN1-203ENST00000574872 PCDH11YQ9BZA8 1340 aa21.74■■□□□ 1.07
PFN1-203ENST00000574872 PKD1L3Q7Z443 1732 aa21.73■■□□□ 1.07
PFN1-203ENST00000574872 SOCS7O14512 581 aa21.71■■□□□ 1.07
PFN1-203ENST00000574872 CYP27B1O15528 508 aa21.71■■□□□ 1.07
PFN1-203ENST00000574872 PRKAR2BP31323 418 aa21.71■■□□□ 1.07
PFN1-203ENST00000574872 CCDC184Q52MB2 194 aa21.71■■□□□ 1.07
PFN1-203ENST00000574872 PLEKHO1Q53GL0 409 aaPredicted RBP21.71■■□□□ 1.07
PFN1-203ENST00000574872 UPF1Q92900 1129 aaKnown RBP eCLIP21.71■■□□□ 1.07
PFN1-203ENST00000574872 RSPH6AQ9H0K4 717 aa21.71■■□□□ 1.07
PFN1-203ENST00000574872 TRIM37O94972 964 aa21.7■■□□□ 1.06
PFN1-203ENST00000574872 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.7■■□□□ 1.06
PFN1-203ENST00000574872 AMOTQ4VCS5 1084 aa21.69■■□□□ 1.06
PFN1-203ENST00000574872 DIEXFQ68CQ4 756 aaKnown RBP21.69■■□□□ 1.06
PFN1-203ENST00000574872 ZNF530Q6P9A1 599 aaPredicted RBP21.69■■□□□ 1.06
PFN1-203ENST00000574872 ACSBG1Q96GR2 724 aa21.69■■□□□ 1.06
PFN1-203ENST00000574872 PLEKHG2Q9H7P9 1386 aa21.68■■□□□ 1.06
PFN1-203ENST00000574872 PHKG2P15735 406 aa21.67■■□□□ 1.06
PFN1-203ENST00000574872 FCHSD2O94868 740 aa21.66■■□□□ 1.06
PFN1-203ENST00000574872 WDR43Q15061 677 aaKnown RBP eCLIP21.66■■□□□ 1.06
PFN1-203ENST00000574872 PTF1AQ7RTS3 328 aa21.66■■□□□ 1.06
PFN1-203ENST00000574872 IFNL2Q8IZJ0 200 aa21.66■■□□□ 1.06
PFN1-203ENST00000574872 MRS2Q9HD23 443 aa21.66■■□□□ 1.06
PFN1-203ENST00000574872 BCL9O00512 1426 aa21.65■■□□□ 1.06
PFN1-203ENST00000574872 KCNQ2O43526 872 aa21.65■■□□□ 1.06
PFN1-203ENST00000574872 MTHFSDQ2M296 383 aaKnown RBP21.65■■□□□ 1.06
PFN1-203ENST00000574872 PHACTR3Q96KR7 559 aa21.65■■□□□ 1.06
PFN1-203ENST00000574872 C1orf141Q5JVX7 400 aa21.64■■□□□ 1.05
PFN1-203ENST00000574872 SYTL4Q96C24 671 aaPredicted RBP21.64■■□□□ 1.05
PFN1-203ENST00000574872 KAT6BQ8WYB5 2073 aa21.64■■□□□ 1.05
PFN1-203ENST00000574872 SF3B2Q13435 895 aaKnown RBP21.63■■□□□ 1.05
PFN1-203ENST00000574872 SBF2Q86WG5 1849 aa21.63■■□□□ 1.05
PFN1-203ENST00000574872 DOT1LQ8TEK3 1739 aa21.63■■□□□ 1.05
PFN1-203ENST00000574872 PRIM1P49642 420 aaKnown RBP21.61■■□□□ 1.05
PFN1-203ENST00000574872 ADAMTS8Q9UP79 889 aa21.61■■□□□ 1.05
PFN1-203ENST00000574872 NHSQ6T4R5 1651 aa21.6■■□□□ 1.05
PFN1-203ENST00000574872 NKX1-1Q15270 411 aaPredicted RBP21.6■■□□□ 1.05
PFN1-203ENST00000574872 MPRIPQ6WCQ1 1025 aa21.6■■□□□ 1.05
PFN1-203ENST00000574872 CCDC146Q8IYE0 955 aa21.6■■□□□ 1.05
PFN1-203ENST00000574872 GAS2L2Q8NHY3 880 aa21.6■■□□□ 1.05
PFN1-203ENST00000574872 BCL11BQ9C0K0 894 aaPredicted RBP21.6■■□□□ 1.05
PFN1-203ENST00000574872 TNS1Q9HBL0 1735 aaKnown RBP21.6■■□□□ 1.05
PFN1-203ENST00000574872 APBA3O96018 575 aa21.59■■□□□ 1.05
PFN1-203ENST00000574872 NEFMP07197 916 aa21.59■■□□□ 1.05
PFN1-203ENST00000574872 AKAP4Q5JQC9 854 aa21.59■■□□□ 1.05
PFN1-203ENST00000574872 DEFB132Q7Z7B7 95 aa21.59■■□□□ 1.05
PFN1-203ENST00000574872 CCDC125Q86Z20 511 aa21.59■■□□□ 1.05
PFN1-203ENST00000574872 PLEKHF1Q96S99 279 aa21.59■■□□□ 1.05
PFN1-203ENST00000574872 TOGARAM1Q9Y4F4 1720 aa21.59■■□□□ 1.05
PFN1-203ENST00000574872 MAPK8IP3Q9UPT6 1336 aa21.58■■□□□ 1.05
PFN1-203ENST00000574872 KDM6AO15550 1401 aaPredicted RBP21.58■■□□□ 1.05
PFN1-203ENST00000574872 HSP90AB1P08238 724 aaKnown RBP21.58■■□□□ 1.05
PFN1-203ENST00000574872 DCAF5Q96JK2 942 aa21.57■■□□□ 1.04
PFN1-203ENST00000574872 PNNQ9H307 717 aaKnown RBP21.57■■□□□ 1.04
PFN1-203ENST00000574872 PNISRQ8TF01 805 aaKnown RBP21.56■■□□□ 1.04
PFN1-203ENST00000574872 MAP3K5Q99683 1374 aa21.56■■□□□ 1.04
PFN1-203ENST00000574872 BAG6P46379 1132 aa21.55■■□□□ 1.04
PFN1-203ENST00000574872 EN1Q05925 392 aaPredicted RBP21.55■■□□□ 1.04
PFN1-203ENST00000574872 GNAT3A8MTJ3 354 aa21.54■■□□□ 1.04
PFN1-203ENST00000574872 MIER1Q8N108 512 aa21.54■■□□□ 1.04
PFN1-203ENST00000574872 LGR6Q9HBX8 967 aa21.54■■□□□ 1.04
PFN1-203ENST00000574872 BTAF1O14981 1849 aa21.53■■□□□ 1.04
PFN1-203ENST00000574872 RNMTO43148 476 aaKnown RBP21.53■■□□□ 1.04
PFN1-203ENST00000574872 RUNDC1Q96C34 613 aa21.52■■□□□ 1.04
PFN1-203ENST00000574872 TMOD3Q9NYL9 352 aa21.52■■□□□ 1.04
PFN1-203ENST00000574872 ITGB4P16144 1822 aa21.51■■□□□ 1.03
PFN1-203ENST00000574872 ERVV-2B6SEH9 535 aa21.51■■□□□ 1.03
PFN1-203ENST00000574872 CABP4P57796 275 aa21.51■■□□□ 1.03
PFN1-203ENST00000574872 NFE2L2Q16236 605 aa21.51■■□□□ 1.03
PFN1-203ENST00000574872 PIGBQ92521 554 aa21.51■■□□□ 1.03
PFN1-203ENST00000574872 RRP7AQ9Y3A4 280 aaKnown RBP21.51■■□□□ 1.03
PFN1-203ENST00000574872 EZH2Q15910 746 aaKnown RBP21.5■■□□□ 1.03
PFN1-203ENST00000574872 FAM9BQ8IZU0 186 aa21.5■■□□□ 1.03
PFN1-203ENST00000574872 SCN11AQ9UI33 1791 aa21.49■■□□□ 1.03
PFN1-203ENST00000574872 DCTN1Q14203 1278 aa21.49■■□□□ 1.03
PFN1-203ENST00000574872 IL17REQ8NFR9 667 aa21.49■■□□□ 1.03
PFN1-203ENST00000574872 RTF1Q92541 710 aaKnown RBP21.49■■□□□ 1.03
PFN1-203ENST00000574872 CCER2I3L3R5 266 aa21.48■■□□□ 1.03
PFN1-203ENST00000574872 NEUROD2Q15784 382 aa21.48■■□□□ 1.03
PFN1-203ENST00000574872 MCM10Q7L590 875 aa21.48■■□□□ 1.03
PFN1-203ENST00000574872 NFATC2IPQ8NCF5 419 aa21.48■■□□□ 1.03
PFN1-203ENST00000574872 CAMKK2Q96RR4 588 aa21.48■■□□□ 1.03
PFN1-203ENST00000574872 SENP3-EIF4A1A0A087X0R7 540 aa21.47■■□□□ 1.03
PFN1-203ENST00000574872 TMPOP42166 694 aaKnown RBP21.47■■□□□ 1.03
PFN1-203ENST00000574872 SLC52A2Q9HAB3 445 aa21.47■■□□□ 1.03
PFN1-203ENST00000574872 VIRMAQ69YN4 1812 aaKnown RBP21.46■■□□□ 1.03
PFN1-203ENST00000574872 PLSCR1O15162 318 aa21.46■■□□□ 1.03
PFN1-203ENST00000574872 RIPK4P57078 832 aa21.46■■□□□ 1.03
PFN1-203ENST00000574872 ADAMTS7Q9UKP4 1686 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms