RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 PPP1R14CQ8TAE6 165 aa18.55■□□□□ 0.56
CACNA1A-202ENST00000573710 POLR3GO15318 223 aaPredicted RBP18.55■□□□□ 0.56
CACNA1A-202ENST00000573710 PIP4K2AP48426 406 aaPredicted RBP18.55■□□□□ 0.56
CACNA1A-202ENST00000573710 LRSAM1Q6UWE0 723 aa18.55■□□□□ 0.56
CACNA1A-202ENST00000573710 NAP1L3Q99457 506 aaPredicted RBP18.55■□□□□ 0.56
CACNA1A-202ENST00000573710 CETN2P41208 172 aa18.55■□□□□ 0.56
CACNA1A-202ENST00000573710 TNMDQ9H2S6 317 aa18.55■□□□□ 0.56
CACNA1A-202ENST00000573710 USP8P40818 1118 aa18.55■□□□□ 0.56
CACNA1A-202ENST00000573710 UQCRHP07919 91 aa18.54■□□□□ 0.56
CACNA1A-202ENST00000573710 SATB1Q01826 763 aa18.54■□□□□ 0.56
CACNA1A-202ENST00000573710 CCDC57Q2TAC2 916 aa18.54■□□□□ 0.56
CACNA1A-202ENST00000573710 EEA1Q15075 1411 aa18.54■□□□□ 0.56
CACNA1A-202ENST00000573710 KLHL10Q6JEL2 608 aa18.54■□□□□ 0.56
CACNA1A-202ENST00000573710 UBAC1Q9BSL1 405 aa18.54■□□□□ 0.56
CACNA1A-202ENST00000573710 TSHZ2Q9NRE2 1034 aa18.54■□□□□ 0.56
CACNA1A-202ENST00000573710 ANKIB1Q9P2G1 1089 aa18.54■□□□□ 0.56
CACNA1A-202ENST00000573710 MXRA7P84157 204 aa18.53■□□□□ 0.56
CACNA1A-202ENST00000573710 PANK1Q8TE04 598 aa18.53■□□□□ 0.56
CACNA1A-202ENST00000573710 ST20-MTHFSA0A0A6YYL1 179 aa18.53■□□□□ 0.56
CACNA1A-202ENST00000573710 POLR3DP05423 398 aaPredicted RBP18.53■□□□□ 0.56
CACNA1A-202ENST00000573710 FAM107BQ9H098 131 aa18.53■□□□□ 0.56
CACNA1A-202ENST00000573710 NOL7Q9UMY1 257 aaKnown RBP18.53■□□□□ 0.56
CACNA1A-202ENST00000573710 SETD5Q9C0A6 1442 aa18.53■□□□□ 0.56
CACNA1A-202ENST00000573710 TPD52P55327 224 aaPredicted RBP18.52■□□□□ 0.56
CACNA1A-202ENST00000573710 FEZ1Q99689 392 aa18.52■□□□□ 0.56
CACNA1A-202ENST00000573710 SEC63Q9UGP8 760 aaKnown RBP18.52■□□□□ 0.56
CACNA1A-202ENST00000573710 FHAD1B1AJZ9 1412 aa18.52■□□□□ 0.56
CACNA1A-202ENST00000573710 SPECC1Q5M775 1068 aa18.52■□□□□ 0.56
CACNA1A-202ENST00000573710 CRACR2AQ9BSW2 395 aa18.52■□□□□ 0.56
CACNA1A-202ENST00000573710 MINDY4BA8MYZ0 360 aa18.51■□□□□ 0.55
CACNA1A-202ENST00000573710 DACH1Q9UI36 760 aa18.51■□□□□ 0.55
CACNA1A-202ENST00000573710 SEPT6Q14141 434 aa18.51■□□□□ 0.55
CACNA1A-202ENST00000573710 ZNF397Q8NF99 534 aaPredicted RBP18.51■□□□□ 0.55
CACNA1A-202ENST00000573710 ANKRD30AQ9BXX3 1397 aa18.51■□□□□ 0.55
CACNA1A-202ENST00000573710 PPP1R12BO60237 982 aaPredicted RBP18.51■□□□□ 0.55
CACNA1A-202ENST00000573710 TSNARE1Q96NA8 513 aa18.51■□□□□ 0.55
CACNA1A-202ENST00000573710 TXLNBQ8N3L3 684 aa18.5■□□□□ 0.55
CACNA1A-202ENST00000573710 KIF20AO95235 890 aa18.5■□□□□ 0.55
CACNA1A-202ENST00000573710 IQCEQ6IPM2 695 aa18.5■□□□□ 0.55
CACNA1A-202ENST00000573710 SHTN1A0MZ66 631 aa18.5■□□□□ 0.55
CACNA1A-202ENST00000573710 ERCC3P19447 782 aa18.5■□□□□ 0.55
CACNA1A-202ENST00000573710 GIGYF2Q6Y7W6 1299 aaKnown RBP18.5■□□□□ 0.55
CACNA1A-202ENST00000573710 RRP1P56182 461 aaKnown RBP18.5■□□□□ 0.55
CACNA1A-202ENST00000573710 DPH6Q7L8W6 267 aa18.5■□□□□ 0.55
CACNA1A-202ENST00000573710 KIF15Q9NS87 1388 aa18.5■□□□□ 0.55
CACNA1A-202ENST00000573710 RFX1P22670 979 aa18.5■□□□□ 0.55
CACNA1A-202ENST00000573710 FAM184BQ9ULE4 1060 aa18.5■□□□□ 0.55
CACNA1A-202ENST00000573710 CCDC82Q8N4S0 544 aa18.49■□□□□ 0.55
CACNA1A-202ENST00000573710 FILIP1Q7Z7B0 1213 aa18.49■□□□□ 0.55
CACNA1A-202ENST00000573710 LUZP1Q86V48 1076 aa18.49■□□□□ 0.55
CACNA1A-202ENST00000573710 SAMM50Q9Y512 469 aa18.49■□□□□ 0.55
CACNA1A-202ENST00000573710 IDH1O75874 414 aaKnown RBP18.49■□□□□ 0.55
CACNA1A-202ENST00000573710 JMYQ8N9B5 988 aa18.49■□□□□ 0.55
CACNA1A-202ENST00000573710 CARMIL1Q5VZK9 1371 aa18.49■□□□□ 0.55
CACNA1A-202ENST00000573710 NAA25Q14CX7 972 aa18.49■□□□□ 0.55
CACNA1A-202ENST00000573710 ATP2B3Q16720 1220 aa18.49■□□□□ 0.55
CACNA1A-202ENST00000573710 CACNA2D4Q7Z3S7 1137 aa18.49■□□□□ 0.55
CACNA1A-202ENST00000573710 CCDC148Q8NFR7 591 aa18.49■□□□□ 0.55
CACNA1A-202ENST00000573710 CARMIL2Q6F5E8 1435 aa18.48■□□□□ 0.55
CACNA1A-202ENST00000573710 SIRT1Q96EB6 747 aa18.48■□□□□ 0.55
CACNA1A-202ENST00000573710 GGNBP2Q9H3C7 697 aa18.48■□□□□ 0.55
CACNA1A-202ENST00000573710 CABP2Q9NPB3 220 aa18.48■□□□□ 0.55
CACNA1A-202ENST00000573710 CLEC11AQ9Y240 323 aa18.48■□□□□ 0.55
CACNA1A-202ENST00000573710 ODF2LQ9ULJ1 636 aa18.48■□□□□ 0.55
CACNA1A-202ENST00000573710 MKNK2Q9HBH9 465 aa18.48■□□□□ 0.55
CACNA1A-202ENST00000573710 C16orf71Q8IYS4 520 aaPredicted RBP18.48■□□□□ 0.55
CACNA1A-202ENST00000573710 HLTFQ14527 1009 aaKnown RBP eCLIP18.47■□□□□ 0.55
CACNA1A-202ENST00000573710 CCDC30Q5VVM6 783 aa18.47■□□□□ 0.55
CACNA1A-202ENST00000573710 LETM1O95202 739 aaPredicted RBP18.47■□□□□ 0.55
CACNA1A-202ENST00000573710 PPP1R9BQ96SB3 815 aa18.47■□□□□ 0.55
CACNA1A-202ENST00000573710 MYBBP1AQ9BQG0 1328 aaKnown RBP18.47■□□□□ 0.55
CACNA1A-202ENST00000573710 XPCQ01831 940 aaPredicted RBP18.47■□□□□ 0.55
CACNA1A-202ENST00000573710 GCOM1H8Y6P7 765 aaPredicted RBP18.46■□□□□ 0.55
CACNA1A-202ENST00000573710 NDC80O14777 642 aa18.46■□□□□ 0.55
CACNA1A-202ENST00000573710 MYZAPP0CAP1 466 aa18.46■□□□□ 0.55
CACNA1A-202ENST00000573710 CASQ1P31415 396 aa18.46■□□□□ 0.55
CACNA1A-202ENST00000573710 PPP1R12AO14974 1030 aaPredicted RBP18.46■□□□□ 0.55
CACNA1A-202ENST00000573710 TNIKQ9UKE5 1360 aa18.46■□□□□ 0.55
CACNA1A-202ENST00000573710 L3MBTL2Q969R5 705 aa18.46■□□□□ 0.55
CACNA1A-202ENST00000573710 ABCC8Q09428 1581 aa18.45■□□□□ 0.54
CACNA1A-202ENST00000573710 CAMK4Q16566 473 aa18.45■□□□□ 0.54
CACNA1A-202ENST00000573710 DDX11Q96FC9 970 aa18.45■□□□□ 0.54
CACNA1A-202ENST00000573710 CDC45O75419 566 aa18.45■□□□□ 0.54
CACNA1A-202ENST00000573710 A0A1W2PRG0 241 aa18.45■□□□□ 0.54
CACNA1A-202ENST00000573710 PROCA1Q8NCQ7 364 aaPredicted RBP18.45■□□□□ 0.54
CACNA1A-202ENST00000573710 CCDC63Q8NA47 563 aa18.45■□□□□ 0.54
CACNA1A-202ENST00000573710 TATP17735 454 aaPredicted RBP18.44■□□□□ 0.54
CACNA1A-202ENST00000573710 PRDM2Q13029 1718 aa18.44■□□□□ 0.54
CACNA1A-202ENST00000573710 ARHGAP29Q52LW3 1261 aa18.44■□□□□ 0.54
CACNA1A-202ENST00000573710 SPA17Q15506 151 aa18.43■□□□□ 0.54
CACNA1A-202ENST00000573710 PROSER2Q86WR7 435 aaPredicted RBP18.43■□□□□ 0.54
CACNA1A-202ENST00000573710 ZPR1O75312 459 aa18.43■□□□□ 0.54
CACNA1A-202ENST00000573710 EPSTI1Q96J88 318 aa18.43■□□□□ 0.54
CACNA1A-202ENST00000573710 TRAK2O60296 914 aa18.43■□□□□ 0.54
CACNA1A-202ENST00000573710 CCDC6Q16204 474 aa18.43■□□□□ 0.54
CACNA1A-202ENST00000573710 BICD1Q96G01 975 aa18.43■□□□□ 0.54
CACNA1A-202ENST00000573710 SYNCQ9H7C4 482 aa18.43■□□□□ 0.54
CACNA1A-202ENST00000573710 GNAI1P63096 354 aa18.42■□□□□ 0.54
CACNA1A-202ENST00000573710 VAT1LQ9HCJ6 419 aa18.42■□□□□ 0.54
CACNA1A-202ENST00000573710 KIF7Q2M1P5 1343 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms