RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 ZNF777Q9ULD5 760 aaPredicted RBP9.58□□□□□ -0.88
CDC27-215ENST00000573550 SPINT1O43278 529 aa9.57□□□□□ -0.88
CDC27-215ENST00000573550 SKIP12755 728 aa9.57□□□□□ -0.88
CDC27-215ENST00000573550 SNRPBP14678 240 aaKnown RBP9.57□□□□□ -0.88
CDC27-215ENST00000573550 TBC1D9Q6ZT07 1266 aa9.57□□□□□ -0.88
CDC27-215ENST00000573550 C14orf37Q86TY3 774 aa9.57□□□□□ -0.88
CDC27-215ENST00000573550 C11orf95C9JLR9 678 aaPredicted RBP9.56□□□□□ -0.88
CDC27-215ENST00000573550 ATP5J2-PTCD1G3V325 749 aa9.56□□□□□ -0.88
CDC27-215ENST00000573550 PTGIRP43119 386 aa9.56□□□□□ -0.88
CDC27-215ENST00000573550 ZNF395Q9H8N7 513 aaPredicted RBP9.56□□□□□ -0.88
CDC27-215ENST00000573550 USP17L5A8MUK1 530 aa9.55□□□□□ -0.88
CDC27-215ENST00000573550 MYCP01106 439 aaPredicted RBP9.55□□□□□ -0.88
CDC27-215ENST00000573550 USP4Q13107 963 aa9.55□□□□□ -0.88
CDC27-215ENST00000573550 CYP2U1Q7Z449 544 aa9.55□□□□□ -0.88
CDC27-215ENST00000573550 NISCHQ9Y2I1 1504 aa9.55□□□□□ -0.88
CDC27-215ENST00000573550 SOS2Q07890 1332 aaPredicted RBP9.55□□□□□ -0.88
CDC27-215ENST00000573550 ATP9BO43861 1147 aa9.54□□□□□ -0.88
CDC27-215ENST00000573550 NCOA4Q13772 614 aa9.53□□□□□ -0.88
CDC27-215ENST00000573550 DEPDC4Q8N2C3 294 aa9.53□□□□□ -0.88
CDC27-215ENST00000573550 INSM2Q96T92 566 aaPredicted RBP9.53□□□□□ -0.88
CDC27-215ENST00000573550 USP17L3A6NCW0 530 aa9.52□□□□□ -0.89
CDC27-215ENST00000573550 USP17L4A6NCW7 530 aa9.52□□□□□ -0.89
CDC27-215ENST00000573550 LZTS3O60299 673 aaPredicted RBP9.52□□□□□ -0.89
CDC27-215ENST00000573550 CTSOP43234 321 aaPredicted RBP9.52□□□□□ -0.89
CDC27-215ENST00000573550 EML3Q32P44 896 aa9.52□□□□□ -0.89
CDC27-215ENST00000573550 USP17L2Q6R6M4 530 aa9.52□□□□□ -0.89
CDC27-215ENST00000573550 USP17L1Q7RTZ2 530 aa9.52□□□□□ -0.89
CDC27-215ENST00000573550 PLEKHM2Q8IWE5 1019 aa9.52□□□□□ -0.89
CDC27-215ENST00000573550 SIRT1Q96EB6 747 aa9.52□□□□□ -0.89
CDC27-215ENST00000573550 ESF1Q9H501 851 aaKnown RBP9.52□□□□□ -0.89
CDC27-215ENST00000573550 ARHGEF10LQ9HCE6 1279 aa9.52□□□□□ -0.89
CDC27-215ENST00000573550 PALM3A6NDB9 673 aaPredicted RBP9.51□□□□□ -0.89
CDC27-215ENST00000573550 PPP1R12CQ9BZL4 782 aa9.51□□□□□ -0.89
CDC27-215ENST00000573550 TFIP11Q9UBB9 837 aaKnown RBP9.51□□□□□ -0.89
CDC27-215ENST00000573550 DNMT3LQ9UJW3 386 aa9.51□□□□□ -0.89
CDC27-215ENST00000573550 MAFBQ9Y5Q3 323 aaPredicted RBP9.51□□□□□ -0.89
CDC27-215ENST00000573550 A0A1W2PRU2 124 aa9.5□□□□□ -0.89
CDC27-215ENST00000573550 TTLL8A6PVC2 850 aa9.5□□□□□ -0.89
CDC27-215ENST00000573550 SOBPA7XYQ1 873 aa9.5□□□□□ -0.89
CDC27-215ENST00000573550 GNRH1P01148 92 aa9.5□□□□□ -0.89
CDC27-215ENST00000573550 CLN3Q13286 438 aa9.5□□□□□ -0.89
CDC27-215ENST00000573550 FOXD4L5Q5VV16 416 aaPredicted RBP9.5□□□□□ -0.89
CDC27-215ENST00000573550 RNF217Q8TC41 542 aa9.49□□□□□ -0.89
CDC27-215ENST00000573550 POLMQ9NP87 494 aaPredicted RBP9.49□□□□□ -0.89
CDC27-215ENST00000573550 RAB6BQ9NRW1 208 aa9.49□□□□□ -0.89
CDC27-215ENST00000573550 PCDHGA11Q9Y5H2 935 aa9.49□□□□□ -0.89
CDC27-215ENST00000573550 STAU1O95793 577 aaKnown RBP9.48□□□□□ -0.89
CDC27-215ENST00000573550 IL2RAP01589 272 aa9.48□□□□□ -0.89
CDC27-215ENST00000573550 TIMELESSQ9UNS1 1208 aa9.48□□□□□ -0.89
CDC27-215ENST00000573550 NOD1Q9Y239 953 aa9.48□□□□□ -0.89
CDC27-215ENST00000573550 ARID3CA6NKF2 412 aa9.47□□□□□ -0.89
CDC27-215ENST00000573550 MEN1O00255 615 aa9.47□□□□□ -0.89
CDC27-215ENST00000573550 MAN1A2O60476 641 aa9.47□□□□□ -0.89
CDC27-215ENST00000573550 SCNN1DP51172 638 aa9.47□□□□□ -0.89
CDC27-215ENST00000573550 ETNK1Q9HBU6 452 aa9.47□□□□□ -0.89
CDC27-215ENST00000573550 HRH3Q9Y5N1 445 aa9.47□□□□□ -0.89
CDC27-215ENST00000573550 RNF144AP50876 292 aaPredicted RBP9.46□□□□□ -0.9
CDC27-215ENST00000573550 GTF2IP78347 998 aa9.46□□□□□ -0.9
CDC27-215ENST00000573550 CFAP70Q5T0N1 1121 aa9.46□□□□□ -0.9
CDC27-215ENST00000573550 FIGNL2A6NMB9 653 aa9.45□□□□□ -0.9
CDC27-215ENST00000573550 GPC1P35052 558 aa9.45□□□□□ -0.9
CDC27-215ENST00000573550 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.45□□□□□ -0.9
CDC27-215ENST00000573550 ERICH6Q7L0X2 663 aa9.45□□□□□ -0.9
CDC27-215ENST00000573550 CNKSR1Q969H4 720 aa9.45□□□□□ -0.9
CDC27-215ENST00000573550 ESYT1Q9BSJ8 1104 aa9.45□□□□□ -0.9
CDC27-215ENST00000573550 WASLO00401 505 aaPredicted RBP9.44□□□□□ -0.9
CDC27-215ENST00000573550 GDF10P55107 478 aa9.44□□□□□ -0.9
CDC27-215ENST00000573550 CLDN10P78369 228 aa9.44□□□□□ -0.9
CDC27-215ENST00000573550 ESCO1Q5FWF5 840 aa9.44□□□□□ -0.9
CDC27-215ENST00000573550 XAGE2Q96GT9 111 aa9.44□□□□□ -0.9
CDC27-215ENST00000573550 NLRP3Q96P20 1036 aa9.44□□□□□ -0.9
CDC27-215ENST00000573550 C1orf115Q9H7X2 142 aa9.44□□□□□ -0.9
CDC27-215ENST00000573550 MKRN1Q9UHC7 482 aaKnown RBP9.44□□□□□ -0.9
CDC27-215ENST00000573550 TMEM229AB2RXF0 380 aa9.43□□□□□ -0.9
CDC27-215ENST00000573550 INHAP05111 366 aa9.43□□□□□ -0.9
CDC27-215ENST00000573550 LMOD1P29536 600 aaPredicted RBP9.43□□□□□ -0.9
CDC27-215ENST00000573550 FHDC1Q9C0D6 1143 aaPredicted RBP9.43□□□□□ -0.9
CDC27-215ENST00000573550 KIAA1024Q9UPX6 916 aa9.43□□□□□ -0.9
CDC27-215ENST00000573550 TRIM50Q86XT4 487 aa9.42□□□□□ -0.9
CDC27-215ENST00000573550 GRIP2Q9C0E4 1043 aa9.42□□□□□ -0.9
CDC27-215ENST00000573550 ZBTB7BO15156 539 aaPredicted RBP9.41□□□□□ -0.9
CDC27-215ENST00000573550 CENPCQ03188 943 aa9.41□□□□□ -0.9
CDC27-215ENST00000573550 KANK4Q5T7N3 995 aaPredicted RBP9.41□□□□□ -0.9
CDC27-215ENST00000573550 OGFOD1Q8N543 542 aa9.41□□□□□ -0.9
CDC27-215ENST00000573550 ZNF775Q96BV0 537 aaPredicted RBP9.41□□□□□ -0.9
CDC27-215ENST00000573550 ATP1A2P50993 1020 aa9.4□□□□□ -0.9
CDC27-215ENST00000573550 LYSMD3Q7Z3D4 306 aa9.4□□□□□ -0.9
CDC27-215ENST00000573550 DKK1O94907 266 aa9.39□□□□□ -0.91
CDC27-215ENST00000573550 PTSQ03393 145 aa9.39□□□□□ -0.91
CDC27-215ENST00000573550 PSME1Q06323 249 aa9.39□□□□□ -0.91
CDC27-215ENST00000573550 SLC27A3Q5K4L6 730 aa9.39□□□□□ -0.91
CDC27-215ENST00000573550 PRICKLE2Q7Z3G6 844 aa9.39□□□□□ -0.91
CDC27-215ENST00000573550 SIX5Q8N196 739 aa9.39□□□□□ -0.91
CDC27-215ENST00000573550 DNAAF2Q9NVR5 837 aaKnown RBP9.39□□□□□ -0.91
CDC27-215ENST00000573550 SENP3-EIF4A1A0A087X0R7 540 aa9.38□□□□□ -0.91
CDC27-215ENST00000573550 TLR1Q15399 786 aa9.38□□□□□ -0.91
CDC27-215ENST00000573550 LARGE2Q8N3Y3 721 aa9.38□□□□□ -0.91
CDC27-215ENST00000573550 CCDC82Q8N4S0 544 aa9.38□□□□□ -0.91
CDC27-215ENST00000573550 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.38□□□□□ -0.91
CDC27-215ENST00000573550 TPCN2Q8NHX9 752 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms