RNA–Protein interactions for RNA: ENST00000573270.1

LINC01996-201, Transcript of long intergenic non-protein coding RNA 1996, humanhuman

TSL 1 (best) BASIC

Gene LINC01996, Length 1,273 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01996-201ENST00000573270 TCP11L2Q8N4U5 519 aa17.96■□□□□ 0.47
LINC01996-201ENST00000573270 DOT1LQ8TEK3 1739 aa17.95■□□□□ 0.46
LINC01996-201ENST00000573270 TOGARAM1Q9Y4F4 1720 aa17.95■□□□□ 0.46
LINC01996-201ENST00000573270 RAPGEF4Q8WZA2 1011 aa17.94■□□□□ 0.46
LINC01996-201ENST00000573270 MAPK8IP3Q9UPT6 1336 aa17.94■□□□□ 0.46
LINC01996-201ENST00000573270 PLEKHG2Q9H7P9 1386 aa17.93■□□□□ 0.46
LINC01996-201ENST00000573270 FCHSD2O94868 740 aa17.93■□□□□ 0.46
LINC01996-201ENST00000573270 IL2RBP14784 551 aa17.93■□□□□ 0.46
LINC01996-201ENST00000573270 TATP17735 454 aaPredicted RBP17.93■□□□□ 0.46
LINC01996-201ENST00000573270 FAM98CQ17RN3 349 aaKnown RBP17.93■□□□□ 0.46
LINC01996-201ENST00000573270 GJD4Q96KN9 370 aaPredicted RBP17.93■□□□□ 0.46
LINC01996-201ENST00000573270 PLEKHF1Q96S99 279 aa17.93■□□□□ 0.46
LINC01996-201ENST00000573270 THRAP3Q9Y2W1 955 aaKnown RBP17.93■□□□□ 0.46
LINC01996-201ENST00000573270 RGS12O14924 1447 aa17.92■□□□□ 0.46
LINC01996-201ENST00000573270 SENP3-EIF4A1A0A087X0R7 540 aa17.92■□□□□ 0.46
LINC01996-201ENST00000573270 QTRT2Q9H974 415 aaKnown RBP17.92■□□□□ 0.46
LINC01996-201ENST00000573270 ADAMTS7Q9UKP4 1686 aa17.92■□□□□ 0.46
LINC01996-201ENST00000573270 BARGINQ6ZT62 677 aa17.91■□□□□ 0.46
LINC01996-201ENST00000573270 RUNDC1Q96C34 613 aa17.91■□□□□ 0.46
LINC01996-201ENST00000573270 SCN11AQ9UI33 1791 aa17.91■□□□□ 0.46
LINC01996-201ENST00000573270 A0A0G2JS52 829 aa17.9■□□□□ 0.46
LINC01996-201ENST00000573270 MYT1Q01538 1121 aa17.9■□□□□ 0.46
LINC01996-201ENST00000573270 PHACTR3Q96KR7 559 aa17.9■□□□□ 0.46
LINC01996-201ENST00000573270 POTEAQ6S8J7 498 aa17.89■□□□□ 0.45
LINC01996-201ENST00000573270 PNNQ9H307 717 aaKnown RBP17.88■□□□□ 0.45
LINC01996-201ENST00000573270 NEFMP07197 916 aa17.87■□□□□ 0.45
LINC01996-201ENST00000573270 MTHFSDQ2M296 383 aaKnown RBP17.87■□□□□ 0.45
LINC01996-201ENST00000573270 ZNF530Q6P9A1 599 aaPredicted RBP17.87■□□□□ 0.45
LINC01996-201ENST00000573270 RRP7AQ9Y3A4 280 aaKnown RBP17.87■□□□□ 0.45
LINC01996-201ENST00000573270 PCDH11XQ9BZA7 1347 aa17.87■□□□□ 0.45
LINC01996-201ENST00000573270 PCDH11YQ9BZA8 1340 aa17.87■□□□□ 0.45
LINC01996-201ENST00000573270 MAP3K5Q99683 1374 aa17.87■□□□□ 0.45
LINC01996-201ENST00000573270 SIPA1L3O60292 1781 aaPredicted RBP17.86■□□□□ 0.45
LINC01996-201ENST00000573270 RBM6P78332 1123 aaKnown RBP17.86■□□□□ 0.45
LINC01996-201ENST00000573270 CDCA7Q9BWT1 371 aaPredicted RBP17.86■□□□□ 0.45
LINC01996-201ENST00000573270 APAF1O14727 1248 aa17.85■□□□□ 0.45
LINC01996-201ENST00000573270 KDM6AO15550 1401 aaPredicted RBP17.85■□□□□ 0.45
LINC01996-201ENST00000573270 NFE2L2Q16236 605 aa17.85■□□□□ 0.45
LINC01996-201ENST00000573270 PLEKHO1Q53GL0 409 aaPredicted RBP17.85■□□□□ 0.45
LINC01996-201ENST00000573270 SPG7Q9UQ90 795 aa17.85■□□□□ 0.45
LINC01996-201ENST00000573270 NHSQ6T4R5 1651 aa17.84■□□□□ 0.45
LINC01996-201ENST00000573270 MRC1P22897 1456 aa17.84■□□□□ 0.45
LINC01996-201ENST00000573270 AMOTQ4VCS5 1084 aa17.84■□□□□ 0.45
LINC01996-201ENST00000573270 GAS2L2Q8NHY3 880 aa17.84■□□□□ 0.45
LINC01996-201ENST00000573270 ZCRB1Q8TBF4 217 aaKnown RBP17.84■□□□□ 0.45
LINC01996-201ENST00000573270 ITGB4P16144 1822 aa17.84■□□□□ 0.45
LINC01996-201ENST00000573270 TMPOP42166 694 aaKnown RBP17.83■□□□□ 0.44
LINC01996-201ENST00000573270 DDB1Q16531 1140 aa17.83■□□□□ 0.44
LINC01996-201ENST00000573270 SEPT12Q8IYM1 358 aa17.83■□□□□ 0.44
LINC01996-201ENST00000573270 PAPPAQ13219 1627 aa17.83■□□□□ 0.44
LINC01996-201ENST00000573270 SBF2Q86WG5 1849 aa17.82■□□□□ 0.44
LINC01996-201ENST00000573270 CYP27B1O15528 508 aa17.82■□□□□ 0.44
LINC01996-201ENST00000573270 RXRBP28702 533 aa17.82■□□□□ 0.44
LINC01996-201ENST00000573270 HNRNPUQ00839 825 aaKnown RBP eCLIP17.82■□□□□ 0.44
LINC01996-201ENST00000573270 NEUROD2Q15784 382 aa17.82■□□□□ 0.44
LINC01996-201ENST00000573270 ILDR2Q71H61 639 aa17.82■□□□□ 0.44
LINC01996-201ENST00000573270 YTHDC1Q96MU7 727 aaKnown RBP17.82■□□□□ 0.44
LINC01996-201ENST00000573270 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.82■□□□□ 0.44
LINC01996-201ENST00000573270 PHKG2P15735 406 aa17.81■□□□□ 0.44
LINC01996-201ENST00000573270 C1orf141Q5JVX7 400 aa17.81■□□□□ 0.44
LINC01996-201ENST00000573270 EXOC5O00471 708 aa17.8■□□□□ 0.44
LINC01996-201ENST00000573270 AKAP4Q5JQC9 854 aa17.8■□□□□ 0.44
LINC01996-201ENST00000573270 DDX54Q8TDD1 881 aaKnown RBP17.8■□□□□ 0.44
LINC01996-201ENST00000573270 SALL2Q9Y467 1007 aaPredicted RBP17.8■□□□□ 0.44
LINC01996-201ENST00000573270 KDM3BQ7LBC6 1761 aa17.8■□□□□ 0.44
LINC01996-201ENST00000573270 ONECUT3O60422 494 aaPredicted RBP17.79■□□□□ 0.44
LINC01996-201ENST00000573270 RIPK4P57078 832 aa17.79■□□□□ 0.44
LINC01996-201ENST00000573270 IFNL2Q8IZJ0 200 aa17.78■□□□□ 0.44
LINC01996-201ENST00000573270 MARCH10Q8NA82 808 aaPredicted RBP17.78■□□□□ 0.44
LINC01996-201ENST00000573270 GNAT3A8MTJ3 354 aa17.77■□□□□ 0.44
LINC01996-201ENST00000573270 DCTN1Q14203 1278 aa17.77■□□□□ 0.44
LINC01996-201ENST00000573270 MCM10Q7L590 875 aa17.77■□□□□ 0.44
LINC01996-201ENST00000573270 THUMPD2Q9BTF0 503 aaKnown RBP17.77■□□□□ 0.44
LINC01996-201ENST00000573270 TNS1Q9HBL0 1735 aaKnown RBP17.77■□□□□ 0.44
LINC01996-201ENST00000573270 BTAF1O14981 1849 aa17.77■□□□□ 0.43
LINC01996-201ENST00000573270 LMOD3Q0VAK6 560 aa17.76■□□□□ 0.43
LINC01996-201ENST00000573270 PDE3BQ13370 1112 aa17.76■□□□□ 0.43
LINC01996-201ENST00000573270 TRIM35Q9UPQ4 493 aa17.76■□□□□ 0.43
LINC01996-201ENST00000573270 CEMIPQ8WUJ3 1361 aa17.76■□□□□ 0.43
LINC01996-201ENST00000573270 FAM182BQ5T319 152 aa17.75■□□□□ 0.43
LINC01996-201ENST00000573270 MPRIPQ6WCQ1 1025 aa17.75■□□□□ 0.43
LINC01996-201ENST00000573270 UBR2Q8IWV8 1755 aa17.74■□□□□ 0.43
LINC01996-201ENST00000573270 RTF1Q92541 710 aaKnown RBP17.74■□□□□ 0.43
LINC01996-201ENST00000573270 RNMTO43148 476 aaKnown RBP17.73■□□□□ 0.43
LINC01996-201ENST00000573270 HSP90AB1P08238 724 aaKnown RBP17.73■□□□□ 0.43
LINC01996-201ENST00000573270 KRT27Q7Z3Y8 459 aa17.73■□□□□ 0.43
LINC01996-201ENST00000573270 ZBED9Q6R2W3 1325 aa17.72■□□□□ 0.43
LINC01996-201ENST00000573270 ZNF521Q96K83 1311 aa17.72■□□□□ 0.43
LINC01996-201ENST00000573270 NKX1-1Q15270 411 aaPredicted RBP17.72■□□□□ 0.43
LINC01996-201ENST00000573270 CCDC27Q2M243 656 aa17.72■□□□□ 0.43
LINC01996-201ENST00000573270 WWC1Q8IX03 1113 aa17.72■□□□□ 0.43
LINC01996-201ENST00000573270 IL17REQ8NFR9 667 aa17.72■□□□□ 0.43
LINC01996-201ENST00000573270 DCAF5Q96JK2 942 aa17.72■□□□□ 0.43
LINC01996-201ENST00000573270 LGR6Q9HBX8 967 aa17.72■□□□□ 0.43
LINC01996-201ENST00000573270 BCL9O00512 1426 aa17.72■□□□□ 0.43
LINC01996-201ENST00000573270 HTATSF1O43719 755 aaKnown RBP17.71■□□□□ 0.43
LINC01996-201ENST00000573270 C5P01031 1676 aa17.71■□□□□ 0.42
LINC01996-201ENST00000573270 ACSBG1Q96GR2 724 aa17.7■□□□□ 0.42
LINC01996-201ENST00000573270 NCBP3Q53F19 620 aaKnown RBP17.69■□□□□ 0.42
LINC01996-201ENST00000573270 NGEFQ8N5V2 710 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms