RNA–Protein interactions for RNA: ENST00000572621.5

PRPF8-205, Transcript of pre-mRNA processing factor 8, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF8, Length 7,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-205ENST00000572621 SRGAP3O43295 1099 aa16.16■□□□□ 0.18
PRPF8-205ENST00000572621 MAP9Q49MG5 647 aa16.16■□□□□ 0.18
PRPF8-205ENST00000572621 ZSCAN31Q96LW9 406 aaPredicted RBP16.16■□□□□ 0.18
PRPF8-205ENST00000572621 MYOM3Q5VTT5 1437 aa16.16■□□□□ 0.18
PRPF8-205ENST00000572621 KIF4BQ2VIQ3 1234 aa16.16■□□□□ 0.18
PRPF8-205ENST00000572621 KLHL10Q6JEL2 608 aa16.15■□□□□ 0.18
PRPF8-205ENST00000572621 TRMT1Q9NXH9 659 aaKnown RBP16.15■□□□□ 0.18
PRPF8-205ENST00000572621 CALCOCO1Q9P1Z2 691 aa16.15■□□□□ 0.18
PRPF8-205ENST00000572621 SLC26A8Q96RN1 970 aa16.15■□□□□ 0.18
PRPF8-205ENST00000572621 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.15■□□□□ 0.18
PRPF8-205ENST00000572621 JAKMIP3Q5VZ66 844 aa16.15■□□□□ 0.18
PRPF8-205ENST00000572621 KIF5CO60282 957 aa16.15■□□□□ 0.18
PRPF8-205ENST00000572621 MYL6BP14649 208 aa16.15■□□□□ 0.18
PRPF8-205ENST00000572621 SULT6B1Q6IMI4 303 aa16.15■□□□□ 0.18
PRPF8-205ENST00000572621 IPO4Q8TEX9 1081 aaKnown RBP16.15■□□□□ 0.18
PRPF8-205ENST00000572621 IMMTQ16891 758 aaKnown RBP16.14■□□□□ 0.18
PRPF8-205ENST00000572621 C16orf45Q96MC5 204 aaPredicted RBP16.14■□□□□ 0.18
PRPF8-205ENST00000572621 RBM42Q9BTD8 480 aaKnown RBP16.14■□□□□ 0.17
PRPF8-205ENST00000572621 RAI14Q9P0K7 980 aa16.14■□□□□ 0.17
PRPF8-205ENST00000572621 BCCIPQ9P287 314 aaKnown RBP eCLIP16.14■□□□□ 0.17
PRPF8-205ENST00000572621 ZHX1Q9UKY1 873 aaPredicted RBP16.14■□□□□ 0.17
PRPF8-205ENST00000572621 PLEKHO1Q53GL0 409 aaPredicted RBP16.14■□□□□ 0.17
PRPF8-205ENST00000572621 PNISRQ8TF01 805 aaKnown RBP16.14■□□□□ 0.17
PRPF8-205ENST00000572621 ZSCAN12O43309 604 aa16.14■□□□□ 0.17
PRPF8-205ENST00000572621 ATF3P18847 181 aa16.14■□□□□ 0.17
PRPF8-205ENST00000572621 TDO2P48775 406 aa16.13■□□□□ 0.17
PRPF8-205ENST00000572621 CCDC183Q5T5S1 534 aa16.13■□□□□ 0.17
PRPF8-205ENST00000572621 GPATCH11Q8N954 259 aa16.13■□□□□ 0.17
PRPF8-205ENST00000572621 UBAC1Q9BSL1 405 aa16.13■□□□□ 0.17
PRPF8-205ENST00000572621 TNNT1P13805 278 aa16.13■□□□□ 0.17
PRPF8-205ENST00000572621 SPA17Q15506 151 aa16.13■□□□□ 0.17
PRPF8-205ENST00000572621 CCDC57Q2TAC2 916 aa16.13■□□□□ 0.17
PRPF8-205ENST00000572621 CCDC83Q8IWF9 413 aa16.13■□□□□ 0.17
PRPF8-205ENST00000572621 NF2P35240 595 aa16.13■□□□□ 0.17
PRPF8-205ENST00000572621 KRT32Q14532 448 aa16.13■□□□□ 0.17
PRPF8-205ENST00000572621 RNF187Q5TA31 235 aaPredicted RBP16.13■□□□□ 0.17
PRPF8-205ENST00000572621 MEX3CQ5U5Q3 659 aaKnown RBP16.12■□□□□ 0.17
PRPF8-205ENST00000572621 WDR63Q8IWG1 891 aa16.12■□□□□ 0.17
PRPF8-205ENST00000572621 TMX1Q9H3N1 280 aa16.12■□□□□ 0.17
PRPF8-205ENST00000572621 RBM25P49756 843 aaKnown RBP16.12■□□□□ 0.17
PRPF8-205ENST00000572621 CFAP70Q5T0N1 1121 aa16.12■□□□□ 0.17
PRPF8-205ENST00000572621 STAC3Q96MF2 364 aa16.12■□□□□ 0.17
PRPF8-205ENST00000572621 CCDC91Q7Z6B0 441 aa16.12■□□□□ 0.17
PRPF8-205ENST00000572621 DNA2P51530 1060 aa16.12■□□□□ 0.17
PRPF8-205ENST00000572621 SLC12A5Q9H2X9 1139 aa16.12■□□□□ 0.17
PRPF8-205ENST00000572621 CLIP2Q9UDT6 1046 aa16.12■□□□□ 0.17
PRPF8-205ENST00000572621 GTF2F1P35269 517 aaKnown RBP eCLIP16.11■□□□□ 0.17
PRPF8-205ENST00000572621 SPDYE4A6NLX3 237 aa16.11■□□□□ 0.17
PRPF8-205ENST00000572621 TOP1P11387 765 aaKnown RBP16.11■□□□□ 0.17
PRPF8-205ENST00000572621 IFFO1Q0D2I5 559 aa16.11■□□□□ 0.17
PRPF8-205ENST00000572621 MPHOSPH8Q99549 860 aa16.11■□□□□ 0.17
PRPF8-205ENST00000572621 GOPCQ9HD26 462 aa16.11■□□□□ 0.17
PRPF8-205ENST00000572621 ANO10Q9NW15 660 aa16.11■□□□□ 0.17
PRPF8-205ENST00000572621 FGD6Q6ZV73 1430 aa16.11■□□□□ 0.17
PRPF8-205ENST00000572621 CTNNA3Q9UI47 895 aa16.11■□□□□ 0.17
PRPF8-205ENST00000572621 USP25Q9UHP3 1055 aa16.11■□□□□ 0.17
PRPF8-205ENST00000572621 ZSCAN25Q6NSZ9 544 aa16.1■□□□□ 0.17
PRPF8-205ENST00000572621 LUZP1Q86V48 1076 aa16.1■□□□□ 0.17
PRPF8-205ENST00000572621 SMG6Q86US8 1419 aaKnown RBP16.1■□□□□ 0.17
PRPF8-205ENST00000572621 MATR3P43243 847 aaKnown RBP eCLIP16.1■□□□□ 0.17
PRPF8-205ENST00000572621 PPP4R3BQ5MIZ7 849 aa16.1■□□□□ 0.17
PRPF8-205ENST00000572621 PDIA4P13667 645 aaKnown RBP16.1■□□□□ 0.17
PRPF8-205ENST00000572621 EXOC6BQ9Y2D4 811 aa16.1■□□□□ 0.17
PRPF8-205ENST00000572621 SPINK5Q9NQ38 1064 aaPredicted RBP16.09■□□□□ 0.17
PRPF8-205ENST00000572621 SPECC1Q5M775 1068 aa16.09■□□□□ 0.17
PRPF8-205ENST00000572621 TMEM57Q8N5G2 664 aa16.09■□□□□ 0.17
PRPF8-205ENST00000572621 MCM3P25205 808 aa16.09■□□□□ 0.17
PRPF8-205ENST00000572621 CEP131Q9UPN4 1083 aa16.09■□□□□ 0.17
PRPF8-205ENST00000572621 GSTTP1A0A1W2PQM5 241 aa16.08■□□□□ 0.17
PRPF8-205ENST00000572621 NBPF1Q3BBV0 1214 aa16.08■□□□□ 0.17
PRPF8-205ENST00000572621 CKAP2LQ8IYA6 745 aa16.08■□□□□ 0.17
PRPF8-205ENST00000572621 TOP2AP11388 1531 aaKnown RBP16.08■□□□□ 0.17
PRPF8-205ENST00000572621 CCDC184Q52MB2 194 aa16.08■□□□□ 0.16
PRPF8-205ENST00000572621 CACNA2D4Q7Z3S7 1137 aa16.08■□□□□ 0.16
PRPF8-205ENST00000572621 PTPRGP23470 1445 aa16.08■□□□□ 0.16
PRPF8-205ENST00000572621 CCDC178Q5BJE1 867 aa16.08■□□□□ 0.16
PRPF8-205ENST00000572621 SKAP1Q86WV1 359 aa16.08■□□□□ 0.16
PRPF8-205ENST00000572621 USP5P45974 858 aa16.07■□□□□ 0.16
PRPF8-205ENST00000572621 GUCY1B3Q02153 619 aa16.07■□□□□ 0.16
PRPF8-205ENST00000572621 NUTM1Q86Y26 1132 aa16.07■□□□□ 0.16
PRPF8-205ENST00000572621 DDX54Q8TDD1 881 aaKnown RBP16.07■□□□□ 0.16
PRPF8-205ENST00000572621 UBE4AQ14139 1066 aa16.07■□□□□ 0.16
PRPF8-205ENST00000572621 WASF1Q92558 559 aa16.07■□□□□ 0.16
PRPF8-205ENST00000572621 ZNF76P36508 570 aa16.07■□□□□ 0.16
PRPF8-205ENST00000572621 ZFP91Q96JP5 570 aaPredicted RBP16.07■□□□□ 0.16
PRPF8-205ENST00000572621 ANKRD50Q9ULJ7 1429 aa16.07■□□□□ 0.16
PRPF8-205ENST00000572621 DESP17661 470 aa16.07■□□□□ 0.16
PRPF8-205ENST00000572621 PAFAH1B1P43034 410 aa16.06■□□□□ 0.16
PRPF8-205ENST00000572621 CEP126Q9P2H0 1117 aa16.06■□□□□ 0.16
PRPF8-205ENST00000572621 CUX1P39880 1505 aa16.06■□□□□ 0.16
PRPF8-205ENST00000572621 NEBLO76041 1014 aa16.06■□□□□ 0.16
PRPF8-205ENST00000572621 CETN2P41208 172 aa16.06■□□□□ 0.16
PRPF8-205ENST00000572621 SCAND2PQ9GZW5 306 aaPredicted RBP16.06■□□□□ 0.16
PRPF8-205ENST00000572621 CPLX3Q8WVH0 158 aa16.06■□□□□ 0.16
PRPF8-205ENST00000572621 IDH1O75874 414 aaKnown RBP16.06■□□□□ 0.16
PRPF8-205ENST00000572621 SSFA2P28290 1259 aa16.06■□□□□ 0.16
PRPF8-205ENST00000572621 CCDC97Q96F63 343 aaPredicted RBP16.06■□□□□ 0.16
PRPF8-205ENST00000572621 MICALCLQ6ZW33 695 aa16.05■□□□□ 0.16
PRPF8-205ENST00000572621 PRAM1Q96QH2 718 aa16.05■□□□□ 0.16
PRPF8-205ENST00000572621 LRP2BPQ9P2M1 347 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms