RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 PNISRQ8TF01 805 aaKnown RBP12.54□□□□□ -0.4
NPLOC4-208ENST00000572351 ADAMTS8Q9UP79 889 aa12.54□□□□□ -0.4
NPLOC4-208ENST00000572351 MAPK8IP3Q9UPT6 1336 aa12.54□□□□□ -0.4
NPLOC4-208ENST00000572351 MAP2P11137 1827 aaKnown RBP12.53□□□□□ -0.4
NPLOC4-208ENST00000572351 DDB1Q16531 1140 aa12.53□□□□□ -0.4
NPLOC4-208ENST00000572351 RSPH6AQ9H0K4 717 aa12.53□□□□□ -0.4
NPLOC4-208ENST00000572351 KDRP35968 1356 aa12.53□□□□□ -0.4
NPLOC4-208ENST00000572351 EXOC5O00471 708 aa12.52□□□□□ -0.41
NPLOC4-208ENST00000572351 PLEKHO1Q53GL0 409 aaPredicted RBP12.52□□□□□ -0.41
NPLOC4-208ENST00000572351 CCDC146Q8IYE0 955 aa12.52□□□□□ -0.41
NPLOC4-208ENST00000572351 SEPT12Q8IYM1 358 aa12.52□□□□□ -0.41
NPLOC4-208ENST00000572351 SPG7Q9UQ90 795 aa12.52□□□□□ -0.41
NPLOC4-208ENST00000572351 MEGF6O75095 1541 aa12.52□□□□□ -0.41
NPLOC4-208ENST00000572351 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.51□□□□□ -0.41
NPLOC4-208ENST00000572351 PDE3BQ13370 1112 aa12.51□□□□□ -0.41
NPLOC4-208ENST00000572351 AMOTQ4VCS5 1084 aa12.51□□□□□ -0.41
NPLOC4-208ENST00000572351 ZCRB1Q8TBF4 217 aaKnown RBP12.51□□□□□ -0.41
NPLOC4-208ENST00000572351 NCAPD2Q15021 1401 aa12.51□□□□□ -0.41
NPLOC4-208ENST00000572351 FAM208AQ9UK61 1670 aaKnown RBP12.51□□□□□ -0.41
NPLOC4-208ENST00000572351 ONECUT3O60422 494 aaPredicted RBP12.5□□□□□ -0.41
NPLOC4-208ENST00000572351 DDX54Q8TDD1 881 aaKnown RBP12.5□□□□□ -0.41
NPLOC4-208ENST00000572351 OVOS2A0A0G2JMS6 1433 aa12.5□□□□□ -0.41
NPLOC4-208ENST00000572351 DISP2A7MBM2 1401 aa12.5□□□□□ -0.41
NPLOC4-208ENST00000572351 GLI3P10071 1580 aa12.49□□□□□ -0.41
NPLOC4-208ENST00000572351 PCDH11XQ9BZA7 1347 aa12.49□□□□□ -0.41
NPLOC4-208ENST00000572351 PCDH11YQ9BZA8 1340 aa12.49□□□□□ -0.41
NPLOC4-208ENST00000572351 GAS2L2Q8NHY3 880 aa12.49□□□□□ -0.41
NPLOC4-208ENST00000572351 RUNDC1Q96C34 613 aa12.49□□□□□ -0.41
NPLOC4-208ENST00000572351 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.49□□□□□ -0.411e-6■□□□□ 8.7
NPLOC4-208ENST00000572351 PLEKHG2Q9H7P9 1386 aa12.48□□□□□ -0.41
NPLOC4-208ENST00000572351 C1orf141Q5JVX7 400 aa12.48□□□□□ -0.41
NPLOC4-208ENST00000572351 ZNF530Q6P9A1 599 aaPredicted RBP12.48□□□□□ -0.41
NPLOC4-208ENST00000572351 PHACTR3Q96KR7 559 aa12.48□□□□□ -0.41
NPLOC4-208ENST00000572351 RGPD5Q99666 1765 aa12.48□□□□□ -0.41
NPLOC4-208ENST00000572351 TNS2Q63HR2 1409 aa12.47□□□□□ -0.41
NPLOC4-208ENST00000572351 MTHFSDQ2M296 383 aaKnown RBP12.47□□□□□ -0.41
NPLOC4-208ENST00000572351 KRT27Q7Z3Y8 459 aa12.47□□□□□ -0.41
NPLOC4-208ENST00000572351 IFNL2Q8IZJ0 200 aa12.47□□□□□ -0.41
NPLOC4-208ENST00000572351 PLEKHF1Q96S99 279 aa12.47□□□□□ -0.41
NPLOC4-208ENST00000572351 RGS12O14924 1447 aa12.46□□□□□ -0.41
NPLOC4-208ENST00000572351 RGPD1P0DJD0 1748 aa12.46□□□□□ -0.41
NPLOC4-208ENST00000572351 HSP90AB1P08238 724 aaKnown RBP12.45□□□□□ -0.42
NPLOC4-208ENST00000572351 NEUROD2Q15784 382 aa12.45□□□□□ -0.42
NPLOC4-208ENST00000572351 NFE2L2Q16236 605 aa12.45□□□□□ -0.42
NPLOC4-208ENST00000572351 RTF1Q92541 710 aaKnown RBP12.45□□□□□ -0.42
NPLOC4-208ENST00000572351 RRP7AQ9Y3A4 280 aaKnown RBP12.45□□□□□ -0.42
NPLOC4-208ENST00000572351 APAF1O14727 1248 aa12.44□□□□□ -0.42
NPLOC4-208ENST00000572351 CYP27B1O15528 508 aa12.44□□□□□ -0.42
NPLOC4-208ENST00000572351 PHKG2P15735 406 aa12.44□□□□□ -0.42
NPLOC4-208ENST00000572351 AKAP4Q5JQC9 854 aa12.44□□□□□ -0.42
NPLOC4-208ENST00000572351 SENP3-EIF4A1A0A087X0R7 540 aa12.43□□□□□ -0.42
NPLOC4-208ENST00000572351 GNAT3A8MTJ3 354 aa12.43□□□□□ -0.42
NPLOC4-208ENST00000572351 RIPK4P57078 832 aa12.43□□□□□ -0.42
NPLOC4-208ENST00000572351 LMOD3Q0VAK6 560 aa12.43□□□□□ -0.42
NPLOC4-208ENST00000572351 MARCH10Q8NA82 808 aaPredicted RBP12.43□□□□□ -0.42
NPLOC4-208ENST00000572351 MAP3K5Q99683 1374 aa12.43□□□□□ -0.42
NPLOC4-208ENST00000572351 THSD7AQ9UPZ6 1657 aa12.42□□□□□ -0.42
NPLOC4-208ENST00000572351 TMPOP42166 694 aaKnown RBP12.42□□□□□ -0.42
NPLOC4-208ENST00000572351 FAM182BQ5T319 152 aa12.42□□□□□ -0.42
NPLOC4-208ENST00000572351 MPRIPQ6WCQ1 1025 aa12.42□□□□□ -0.42
NPLOC4-208ENST00000572351 PARP4Q9UKK3 1724 aaKnown RBP12.42□□□□□ -0.42
NPLOC4-208ENST00000572351 RGPD2P0DJD1 1756 aa12.41□□□□□ -0.42
NPLOC4-208ENST00000572351 FAM196AQ6ZSG2 479 aa12.41□□□□□ -0.42
NPLOC4-208ENST00000572351 SYTL4Q96C24 671 aaPredicted RBP12.41□□□□□ -0.42
NPLOC4-208ENST00000572351 DCAF5Q96JK2 942 aa12.41□□□□□ -0.42
NPLOC4-208ENST00000572351 SALL2Q9Y467 1007 aaPredicted RBP12.41□□□□□ -0.42
NPLOC4-208ENST00000572351 LRRC37A3O60309 1634 aa12.4□□□□□ -0.42
NPLOC4-208ENST00000572351 NKX1-1Q15270 411 aaPredicted RBP12.4□□□□□ -0.42
NPLOC4-208ENST00000572351 HTATSF1O43719 755 aaKnown RBP12.39□□□□□ -0.43
NPLOC4-208ENST00000572351 CABP4P57796 275 aa12.39□□□□□ -0.43
NPLOC4-208ENST00000572351 MCM10Q7L590 875 aa12.39□□□□□ -0.43
NPLOC4-208ENST00000572351 ACSBG1Q96GR2 724 aa12.39□□□□□ -0.43
NPLOC4-208ENST00000572351 RNMTO43148 476 aaKnown RBP12.38□□□□□ -0.43
NPLOC4-208ENST00000572351 HNRNPUQ00839 825 aaKnown RBP eCLIP12.38□□□□□ -0.43
NPLOC4-208ENST00000572351 TEFQ10587 303 aa12.38□□□□□ -0.43
NPLOC4-208ENST00000572351 DCTN1Q14203 1278 aa12.38□□□□□ -0.43
NPLOC4-208ENST00000572351 DCAF8L1A6NGE4 600 aa12.37□□□□□ -0.43
NPLOC4-208ENST00000572351 ERVV-2B6SEH9 535 aa12.37□□□□□ -0.43
NPLOC4-208ENST00000572351 PRIM1P49642 420 aaKnown RBP12.37□□□□□ -0.43
NPLOC4-208ENST00000572351 LGR6Q9HBX8 967 aa12.37□□□□□ -0.43
NPLOC4-208ENST00000572351 TMOD3Q9NYL9 352 aa12.37□□□□□ -0.43
NPLOC4-208ENST00000572351 KDM6AO15550 1401 aaPredicted RBP12.37□□□□□ -0.43
NPLOC4-208ENST00000572351 CALD1Q05682 793 aaKnown RBP12.36□□□□□ -0.43
NPLOC4-208ENST00000572351 NGEFQ8N5V2 710 aa12.36□□□□□ -0.43
NPLOC4-208ENST00000572351 IL17REQ8NFR9 667 aa12.36□□□□□ -0.43
NPLOC4-208ENST00000572351 THUMPD2Q9BTF0 503 aaKnown RBP12.36□□□□□ -0.43
NPLOC4-208ENST00000572351 TRIM35Q9UPQ4 493 aa12.36□□□□□ -0.43
NPLOC4-208ENST00000572351 WNK3Q9BYP7 1800 aa12.36□□□□□ -0.43
NPLOC4-208ENST00000572351 PKD1L3Q7Z443 1732 aa12.36□□□□□ -0.43
NPLOC4-208ENST00000572351 TRIM37O94972 964 aa12.35□□□□□ -0.43
NPLOC4-208ENST00000572351 CCDC27Q2M243 656 aa12.35□□□□□ -0.43
NPLOC4-208ENST00000572351 NFATC2IPQ8NCF5 419 aa12.35□□□□□ -0.43
NPLOC4-208ENST00000572351 YTHDC1Q96MU7 727 aaKnown RBP12.35□□□□□ -0.43
NPLOC4-208ENST00000572351 SLC52A2Q9HAB3 445 aa12.35□□□□□ -0.43
NPLOC4-208ENST00000572351 BCL9O00512 1426 aa12.35□□□□□ -0.43
NPLOC4-208ENST00000572351 KCNQ2O43526 872 aa12.34□□□□□ -0.43
NPLOC4-208ENST00000572351 SF3B2Q13435 895 aaKnown RBP12.34□□□□□ -0.43
NPLOC4-208ENST00000572351 WWC1Q8IX03 1113 aa12.34□□□□□ -0.43
NPLOC4-208ENST00000572351 BCL11BQ9C0K0 894 aaPredicted RBP12.34□□□□□ -0.43
NPLOC4-208ENST00000572351 LAS1LQ9Y4W2 734 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms