RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 FBXO41Q8TF61 875 aa8.78□□□□□ -1
CTDNEP1-204ENST00000570484 MS4A3Q96HJ5 214 aa8.78□□□□□ -1
CTDNEP1-204ENST00000570484 COL3A1P02461 1466 aaPredicted RBP8.77□□□□□ -1
CTDNEP1-204ENST00000570484 INSRP06213 1382 aa8.77□□□□□ -1.01
CTDNEP1-204ENST00000570484 U2SURPO15042 1029 aaKnown RBP8.77□□□□□ -1.01
CTDNEP1-204ENST00000570484 CSB-PGBD3P0DP91 1061 aa8.77□□□□□ -1.01
CTDNEP1-204ENST00000570484 FBLN1P23142 703 aa8.77□□□□□ -1.01
CTDNEP1-204ENST00000570484 HOXC9P31274 260 aa8.77□□□□□ -1.01
CTDNEP1-204ENST00000570484 MEX3CQ5U5Q3 659 aaKnown RBP8.77□□□□□ -1.01
CTDNEP1-204ENST00000570484 ARHGEF25Q86VW2 580 aa8.77□□□□□ -1.01
CTDNEP1-204ENST00000570484 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.77□□□□□ -1.01
CTDNEP1-204ENST00000570484 ADAMTS2O95450 1211 aa8.76□□□□□ -1.01
CTDNEP1-204ENST00000570484 NEFMP07197 916 aa8.76□□□□□ -1.01
CTDNEP1-204ENST00000570484 FAM9BQ8IZU0 186 aa8.76□□□□□ -1.01
CTDNEP1-204ENST00000570484 IP6K1Q92551 441 aa8.76□□□□□ -1.01
CTDNEP1-204ENST00000570484 LTV1Q96GA3 475 aaPredicted RBP8.76□□□□□ -1.01
CTDNEP1-204ENST00000570484 PEAK1Q9H792 1746 aa8.76□□□□□ -1.01
CTDNEP1-204ENST00000570484 LTN1O94822 1766 aa8.76□□□□□ -1.01
CTDNEP1-204ENST00000570484 U2AF1L5P0DN76 240 aaPredicted RBP8.75□□□□□ -1.01
CTDNEP1-204ENST00000570484 U2AF1Q01081 240 aaKnown RBP eCLIP8.75□□□□□ -1.01
CTDNEP1-204ENST00000570484 CHRNA2Q15822 529 aa8.75□□□□□ -1.01
CTDNEP1-204ENST00000570484 HSP90AB2PQ58FF8 381 aa8.75□□□□□ -1.01
CTDNEP1-204ENST00000570484 STK24Q9Y6E0 443 aa8.75□□□□□ -1.01
CTDNEP1-204ENST00000570484 MAPK8IP3Q9UPT6 1336 aa8.75□□□□□ -1.01
CTDNEP1-204ENST00000570484 COL14A1Q05707 1796 aaKnown RBP8.74□□□□□ -1.01
CTDNEP1-204ENST00000570484 EIF4A2Q14240 407 aaKnown RBP8.74□□□□□ -1.01
CTDNEP1-204ENST00000570484 CCDC184Q52MB2 194 aa8.74□□□□□ -1.01
CTDNEP1-204ENST00000570484 ANKRD24Q8TF21 1146 aa8.74□□□□□ -1.01
CTDNEP1-204ENST00000570484 TRPC6Q9Y210 931 aa8.74□□□□□ -1.01
CTDNEP1-204ENST00000570484 ERBB3P21860 1342 aa8.74□□□□□ -1.01
CTDNEP1-204ENST00000570484 COL5A2P05997 1499 aaPredicted RBP8.73□□□□□ -1.01
CTDNEP1-204ENST00000570484 GALR2O43603 387 aaPredicted RBP8.73□□□□□ -1.01
CTDNEP1-204ENST00000570484 TIE1P35590 1138 aa8.73□□□□□ -1.01
CTDNEP1-204ENST00000570484 SPRYD3Q8NCJ5 442 aa8.73□□□□□ -1.01
CTDNEP1-204ENST00000570484 C8orf37Q96NL8 207 aa8.73□□□□□ -1.01
CTDNEP1-204ENST00000570484 PNNQ9H307 717 aaKnown RBP8.73□□□□□ -1.01
CTDNEP1-204ENST00000570484 LRP6O75581 1613 aa8.72□□□□□ -1.01
CTDNEP1-204ENST00000570484 LMO7Q8WWI1 1683 aa8.72□□□□□ -1.01
CTDNEP1-204ENST00000570484 FAM208AQ9UK61 1670 aaKnown RBP8.72□□□□□ -1.01
CTDNEP1-204ENST00000570484 GTPBP6O43824 516 aaPredicted RBP8.72□□□□□ -1.01
CTDNEP1-204ENST00000570484 GABBR2O75899 941 aa8.72□□□□□ -1.01
CTDNEP1-204ENST00000570484 EVA1CP58658 441 aa8.72□□□□□ -1.01
CTDNEP1-204ENST00000570484 YTHDC1Q96MU7 727 aaKnown RBP8.72□□□□□ -1.01
CTDNEP1-204ENST00000570484 STRN4Q9NRL3 753 aa8.72□□□□□ -1.01
CTDNEP1-204ENST00000570484 NLRP2Q9NX02 1062 aa8.72□□□□□ -1.01
CTDNEP1-204ENST00000570484 BTG4Q9NY30 223 aa8.72□□□□□ -1.01
CTDNEP1-204ENST00000570484 IL13P35225 146 aa8.71□□□□□ -1.02
CTDNEP1-204ENST00000570484 TOM1L2Q6ZVM7 507 aa8.71□□□□□ -1.02
CTDNEP1-204ENST00000570484 PNISRQ8TF01 805 aaKnown RBP8.71□□□□□ -1.02
CTDNEP1-204ENST00000570484 NGLY1Q96IV0 654 aa8.71□□□□□ -1.02
CTDNEP1-204ENST00000570484 WDR17Q8IZU2 1322 aa8.71□□□□□ -1.02
CTDNEP1-204ENST00000570484 IGSF1Q8N6C5 1336 aa8.71□□□□□ -1.02
CTDNEP1-204ENST00000570484 PLCH1Q4KWH8 1693 aa8.71□□□□□ -1.02
CTDNEP1-204ENST00000570484 CAMTA1Q9Y6Y1 1673 aa8.7□□□□□ -1.02
CTDNEP1-204ENST00000570484 FAM83GA6ND36 823 aa8.7□□□□□ -1.02
CTDNEP1-204ENST00000570484 HMOX1P09601 288 aa8.7□□□□□ -1.02
CTDNEP1-204ENST00000570484 PAXIP1Q6ZW49 1069 aaPredicted RBP8.7□□□□□ -1.02
CTDNEP1-204ENST00000570484 ADAMTS8Q9UP79 889 aa8.7□□□□□ -1.02
CTDNEP1-204ENST00000570484 AXIN2Q9Y2T1 843 aa8.7□□□□□ -1.02
CTDNEP1-204ENST00000570484 CCDC9Q9Y3X0 531 aaKnown RBP8.7□□□□□ -1.02
CTDNEP1-204ENST00000570484 CRB1P82279 1406 aa8.7□□□□□ -1.02
CTDNEP1-204ENST00000570484 MAP2P11137 1827 aaKnown RBP8.69□□□□□ -1.02
CTDNEP1-204ENST00000570484 FCHSD2O94868 740 aa8.69□□□□□ -1.02
CTDNEP1-204ENST00000570484 PRKAR2BP31323 418 aa8.69□□□□□ -1.02
CTDNEP1-204ENST00000570484 HNRNPUQ00839 825 aaKnown RBP eCLIP8.69□□□□□ -1.02
CTDNEP1-204ENST00000570484 SULT6B1Q6IMI4 303 aa8.69□□□□□ -1.02
CTDNEP1-204ENST00000570484 CCDC146Q8IYE0 955 aa8.69□□□□□ -1.02
CTDNEP1-204ENST00000570484 USHBP1Q8N6Y0 703 aa8.69□□□□□ -1.02
CTDNEP1-204ENST00000570484 RAPGEF4Q8WZA2 1011 aa8.69□□□□□ -1.02
CTDNEP1-204ENST00000570484 EYA1Q99502 592 aa8.69□□□□□ -1.02
CTDNEP1-204ENST00000570484 SLIT2O94813 1529 aa8.69□□□□□ -1.02
CTDNEP1-204ENST00000570484 TTLL13PA6NNM8 815 aa8.68□□□□□ -1.02
CTDNEP1-204ENST00000570484 ILDR1Q86SU0 546 aaPredicted RBP8.68□□□□□ -1.02
CTDNEP1-204ENST00000570484 RUNDC1Q96C34 613 aa8.68□□□□□ -1.02
CTDNEP1-204ENST00000570484 TMEM106CQ9BVX2 250 aa8.68□□□□□ -1.02
CTDNEP1-204ENST00000570484 RSPH6AQ9H0K4 717 aa8.68□□□□□ -1.02
CTDNEP1-204ENST00000570484 BMP2KQ9NSY1 1161 aaPredicted RBP8.68□□□□□ -1.02
CTDNEP1-204ENST00000570484 KDRP35968 1356 aa8.68□□□□□ -1.02
CTDNEP1-204ENST00000570484 RGPD1P0DJD0 1748 aa8.68□□□□□ -1.02
CTDNEP1-204ENST00000570484 NWD2Q9ULI1 1742 aa8.68□□□□□ -1.02
CTDNEP1-204ENST00000570484 COL18A1P39060 1754 aa8.67□□□□□ -1.02
CTDNEP1-204ENST00000570484 AFF2P51816 1311 aa8.67□□□□□ -1.02
CTDNEP1-204ENST00000570484 NCAPD2Q15021 1401 aa8.67□□□□□ -1.02
CTDNEP1-204ENST00000570484 NBPF6Q5VWK0 638 aa8.67□□□□□ -1.02
CTDNEP1-204ENST00000570484 LARP1Q6PKG0 1096 aaKnown RBP8.67□□□□□ -1.02
CTDNEP1-204ENST00000570484 NRAPQ86VF7 1730 aa8.67□□□□□ -1.02
CTDNEP1-204ENST00000570484 AEBP1Q8IUX7 1158 aa8.67□□□□□ -1.02
CTDNEP1-204ENST00000570484 UNC5CLQ8IV45 518 aa8.67□□□□□ -1.02
CTDNEP1-204ENST00000570484 NBPF4Q96M43 638 aa8.67□□□□□ -1.02
CTDNEP1-204ENST00000570484 MFRPQ9BY79 579 aa8.67□□□□□ -1.02
CTDNEP1-204ENST00000570484 PLEKHG2Q9H7P9 1386 aa8.67□□□□□ -1.02
CTDNEP1-204ENST00000570484 RYDENQ9NUL5 291 aaKnown RBP8.67□□□□□ -1.02
CTDNEP1-204ENST00000570484 USP35Q9P2H5 1018 aa8.67□□□□□ -1.02
CTDNEP1-204ENST00000570484 USP21Q9UK80 565 aa8.67□□□□□ -1.02
CTDNEP1-204ENST00000570484 A0A0G2JS52 829 aa8.66□□□□□ -1.02
CTDNEP1-204ENST00000570484 TATP17735 454 aaPredicted RBP8.66□□□□□ -1.02
CTDNEP1-204ENST00000570484 MYT1Q01538 1121 aa8.66□□□□□ -1.02
CTDNEP1-204ENST00000570484 LMOD3Q0VAK6 560 aa8.66□□□□□ -1.02
CTDNEP1-204ENST00000570484 ASTLQ6HA08 431 aaPredicted RBP8.66□□□□□ -1.02
CTDNEP1-204ENST00000570484 GAS2L2Q8NHY3 880 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms