RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 NBPF4Q96M43 638 aa13.05□□□□□ -0.32
HCCAT5-201ENST00000569990 IL2RBP14784 551 aa13.04□□□□□ -0.32
HCCAT5-201ENST00000569990 PDE3BQ13370 1112 aa13.04□□□□□ -0.32
HCCAT5-201ENST00000569990 DDB1Q16531 1140 aa13.04□□□□□ -0.32
HCCAT5-201ENST00000569990 FAM182BQ5T319 152 aa13.04□□□□□ -0.32
HCCAT5-201ENST00000569990 RGPD2P0DJD1 1756 aa13.04□□□□□ -0.32
HCCAT5-201ENST00000569990 TNS2Q63HR2 1409 aa13.04□□□□□ -0.32
HCCAT5-201ENST00000569990 CNGB1Q14028 1251 aaPredicted RBP13.03□□□□□ -0.32
HCCAT5-201ENST00000569990 NCAPD2Q15021 1401 aa13.03□□□□□ -0.32
HCCAT5-201ENST00000569990 EIF4A2Q14240 407 aaKnown RBP13.02□□□□□ -0.33
HCCAT5-201ENST00000569990 USHBP1Q8N6Y0 703 aa13.02□□□□□ -0.33
HCCAT5-201ENST00000569990 EXOC5O00471 708 aa13.01□□□□□ -0.33
HCCAT5-201ENST00000569990 MTHFSP49914 203 aa13.01□□□□□ -0.33
HCCAT5-201ENST00000569990 DDX10Q13206 875 aaKnown RBP13.01□□□□□ -0.33
HCCAT5-201ENST00000569990 FAM196AQ6ZSG2 479 aa13.01□□□□□ -0.33
HCCAT5-201ENST00000569990 MEGF6O75095 1541 aa13.01□□□□□ -0.33
HCCAT5-201ENST00000569990 OVOS2A0A0G2JMS6 1433 aa13□□□□□ -0.33
HCCAT5-201ENST00000569990 CCDC125Q86Z20 511 aa13□□□□□ -0.33
HCCAT5-201ENST00000569990 MARCH10Q8NA82 808 aaPredicted RBP13□□□□□ -0.33
HCCAT5-201ENST00000569990 EYA1Q99502 592 aa13□□□□□ -0.33
HCCAT5-201ENST00000569990 BCL9O00512 1426 aa12.98□□□□□ -0.33
HCCAT5-201ENST00000569990 IGSF1Q8N6C5 1336 aa12.98□□□□□ -0.33
HCCAT5-201ENST00000569990 REM2Q8IYK8 340 aaPredicted RBP12.98□□□□□ -0.33
HCCAT5-201ENST00000569990 RAPGEF4Q8WZA2 1011 aa12.98□□□□□ -0.33
HCCAT5-201ENST00000569990 TATP17735 454 aaPredicted RBP12.97□□□□□ -0.33
HCCAT5-201ENST00000569990 IL13P35225 146 aa12.97□□□□□ -0.33
HCCAT5-201ENST00000569990 PARD3Q8TEW0 1356 aa12.96□□□□□ -0.33
HCCAT5-201ENST00000569990 ZNF316A6NFI3 1004 aaPredicted RBP12.96□□□□□ -0.33
HCCAT5-201ENST00000569990 TRIM37O94972 964 aa12.96□□□□□ -0.33
HCCAT5-201ENST00000569990 PPP2R1AP30153 589 aa12.96□□□□□ -0.33
HCCAT5-201ENST00000569990 ZCRB1Q8TBF4 217 aaKnown RBP12.96□□□□□ -0.33
HCCAT5-201ENST00000569990 COL3A1P02461 1466 aaPredicted RBP12.96□□□□□ -0.34
HCCAT5-201ENST00000569990 RGPD1P0DJD0 1748 aa12.96□□□□□ -0.34
HCCAT5-201ENST00000569990 SF3B2Q13435 895 aaKnown RBP12.95□□□□□ -0.34
HCCAT5-201ENST00000569990 SHANK3Q9BYB0 1731 aa12.95□□□□□ -0.34
HCCAT5-201ENST00000569990 TNS1Q9HBL0 1735 aaKnown RBP12.95□□□□□ -0.34
HCCAT5-201ENST00000569990 DIAPH1O60610 1272 aaKnown RBP12.94□□□□□ -0.34
HCCAT5-201ENST00000569990 DDX54Q8TDD1 881 aaKnown RBP12.94□□□□□ -0.34
HCCAT5-201ENST00000569990 KDRP35968 1356 aa12.94□□□□□ -0.34
HCCAT5-201ENST00000569990 DEFB132Q7Z7B7 95 aa12.93□□□□□ -0.34
HCCAT5-201ENST00000569990 SP7Q8TDD2 431 aaPredicted RBP12.93□□□□□ -0.34
HCCAT5-201ENST00000569990 PKD1L3Q7Z443 1732 aa12.93□□□□□ -0.34
HCCAT5-201ENST00000569990 PLEKHG2Q9H7P9 1386 aa12.93□□□□□ -0.34
HCCAT5-201ENST00000569990 SBF2Q86WG5 1849 aa12.92□□□□□ -0.34
HCCAT5-201ENST00000569990 BAG6P46379 1132 aa12.92□□□□□ -0.34
HCCAT5-201ENST00000569990 SULT6B1Q6IMI4 303 aa12.92□□□□□ -0.34
HCCAT5-201ENST00000569990 AEBP1Q8IUX7 1158 aa12.92□□□□□ -0.34
HCCAT5-201ENST00000569990 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.92□□□□□ -0.34
HCCAT5-201ENST00000569990 PCDH11XQ9BZA7 1347 aa12.91□□□□□ -0.34
HCCAT5-201ENST00000569990 PCDH11YQ9BZA8 1340 aa12.91□□□□□ -0.34
HCCAT5-201ENST00000569990 CYP27B1O15528 508 aa12.91□□□□□ -0.34
HCCAT5-201ENST00000569990 PTF1AQ7RTS3 328 aa12.91□□□□□ -0.34
HCCAT5-201ENST00000569990 PIP4P2Q8N4L2 257 aa12.91□□□□□ -0.34
HCCAT5-201ENST00000569990 CFAP53Q96M91 514 aa12.91□□□□□ -0.34
HCCAT5-201ENST00000569990 BCL11BQ9C0K0 894 aaPredicted RBP12.91□□□□□ -0.34
HCCAT5-201ENST00000569990 SPG7Q9UQ90 795 aa12.91□□□□□ -0.34
HCCAT5-201ENST00000569990 NHSQ6T4R5 1651 aa12.9□□□□□ -0.34
HCCAT5-201ENST00000569990 KCNQ2O43526 872 aa12.9□□□□□ -0.34
HCCAT5-201ENST00000569990 APBA3O96018 575 aa12.9□□□□□ -0.34
HCCAT5-201ENST00000569990 RALBP1Q15311 655 aa12.9□□□□□ -0.34
HCCAT5-201ENST00000569990 ACSBG1Q96GR2 724 aa12.9□□□□□ -0.34
HCCAT5-201ENST00000569990 EN1Q05925 392 aaPredicted RBP12.89□□□□□ -0.35
HCCAT5-201ENST00000569990 U2SURPO15042 1029 aaKnown RBP12.88□□□□□ -0.35
HCCAT5-201ENST00000569990 HMOX1P09601 288 aa12.88□□□□□ -0.35
HCCAT5-201ENST00000569990 DOT1LQ8TEK3 1739 aa12.88□□□□□ -0.35
HCCAT5-201ENST00000569990 PHKG2P15735 406 aa12.87□□□□□ -0.35
HCCAT5-201ENST00000569990 NKX1-1Q15270 411 aaPredicted RBP12.87□□□□□ -0.35
HCCAT5-201ENST00000569990 AMOTQ4VCS5 1084 aa12.87□□□□□ -0.35
HCCAT5-201ENST00000569990 PLEKHO1Q53GL0 409 aaPredicted RBP12.87□□□□□ -0.35
HCCAT5-201ENST00000569990 CAMKK2Q96RR4 588 aa12.87□□□□□ -0.35
HCCAT5-201ENST00000569990 MYBBP1AQ9BQG0 1328 aaKnown RBP12.87□□□□□ -0.35
HCCAT5-201ENST00000569990 PLSCR1O15162 318 aa12.86□□□□□ -0.35
HCCAT5-201ENST00000569990 PRIM1P49642 420 aaKnown RBP12.86□□□□□ -0.35
HCCAT5-201ENST00000569990 EZH2Q15910 746 aaKnown RBP12.86□□□□□ -0.35
HCCAT5-201ENST00000569990 IFNL2Q8IZJ0 200 aa12.86□□□□□ -0.35
HCCAT5-201ENST00000569990 PRKRIP1Q9H875 184 aaPredicted RBP12.86□□□□□ -0.35
HCCAT5-201ENST00000569990 NUDCQ9Y266 331 aa12.86□□□□□ -0.35
HCCAT5-201ENST00000569990 RGPD3A6NKT7 1758 aaPredicted RBP12.85□□□□□ -0.35
HCCAT5-201ENST00000569990 RGPD4Q7Z3J3 1758 aa12.85□□□□□ -0.35
HCCAT5-201ENST00000569990 PITPNM1O00562 1244 aa12.85□□□□□ -0.35
HCCAT5-201ENST00000569990 TOGARAM1Q9Y4F4 1720 aa12.85□□□□□ -0.35
HCCAT5-201ENST00000569990 BTAF1O14981 1849 aa12.84□□□□□ -0.35
HCCAT5-201ENST00000569990 ZBTB22O15209 634 aa12.84□□□□□ -0.35
HCCAT5-201ENST00000569990 ZNF530Q6P9A1 599 aaPredicted RBP12.84□□□□□ -0.35
HCCAT5-201ENST00000569990 SYTL4Q96C24 671 aaPredicted RBP12.84□□□□□ -0.35
HCCAT5-201ENST00000569990 RREB1Q92766 1687 aa12.83□□□□□ -0.35
HCCAT5-201ENST00000569990 U2AF1L5P0DN76 240 aaPredicted RBP12.83□□□□□ -0.36
HCCAT5-201ENST00000569990 U2AF1Q01081 240 aaKnown RBP eCLIP12.83□□□□□ -0.36
HCCAT5-201ENST00000569990 RSPH6AQ9H0K4 717 aa12.83□□□□□ -0.36
HCCAT5-201ENST00000569990 HSP90AB1P08238 724 aaKnown RBP12.82□□□□□ -0.36
HCCAT5-201ENST00000569990 C1orf141Q5JVX7 400 aa12.82□□□□□ -0.36
HCCAT5-201ENST00000569990 KDM6AO15550 1401 aaPredicted RBP12.81□□□□□ -0.36
HCCAT5-201ENST00000569990 PRKAR2BP31323 418 aa12.81□□□□□ -0.36
HCCAT5-201ENST00000569990 MTHFSDQ2M296 383 aaKnown RBP12.81□□□□□ -0.36
HCCAT5-201ENST00000569990 PROM2Q8N271 834 aa12.81□□□□□ -0.36
HCCAT5-201ENST00000569990 DCAF5Q96JK2 942 aa12.81□□□□□ -0.36
HCCAT5-201ENST00000569990 NUP188Q5SRE5 1749 aa12.81□□□□□ -0.36
HCCAT5-201ENST00000569990 HAX1O00165 279 aa12.8□□□□□ -0.36
HCCAT5-201ENST00000569990 FCHSD2O94868 740 aa12.8□□□□□ -0.36
HCCAT5-201ENST00000569990 TXNRD1Q16881 649 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms