RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 SOX12O15370 315 aa7.69□□□□□ -1.18
CYLD-216ENST00000569891 API5Q9BZZ5 524 aaKnown RBP7.69□□□□□ -1.18
CYLD-216ENST00000569891 LAS1LQ9Y4W2 734 aaKnown RBP7.69□□□□□ -1.18
CYLD-216ENST00000569891 MAP3K19Q56UN5 1328 aa7.68□□□□□ -1.18
CYLD-216ENST00000569891 PLEKHO1Q53GL0 409 aaPredicted RBP7.68□□□□□ -1.18
CYLD-216ENST00000569891 IP6K1Q92551 441 aa7.68□□□□□ -1.18
CYLD-216ENST00000569891 DDX19BQ9UMR2 479 aa7.68□□□□□ -1.18
CYLD-216ENST00000569891 SBF2Q86WG5 1849 aa7.68□□□□□ -1.18
CYLD-216ENST00000569891 FRAT1Q92837 279 aaPredicted RBP7.68□□□□□ -1.18
CYLD-216ENST00000569891 CFAP44Q96MT7 982 aa7.68□□□□□ -1.18
CYLD-216ENST00000569891 TMEM94Q12767 1356 aa7.68□□□□□ -1.18
CYLD-216ENST00000569891 PLEKHG2Q9H7P9 1386 aa7.68□□□□□ -1.18
CYLD-216ENST00000569891 RWDD1Q9H446 243 aaPredicted RBP7.68□□□□□ -1.18
CYLD-216ENST00000569891 COL6A3P12111 3177 aa7.68□□□□□ -1.18
CYLD-216ENST00000569891 B4GALNT3Q6L9W6 998 aa7.67□□□□□ -1.18
CYLD-216ENST00000569891 FANCIQ9NVI1 1328 aa7.67□□□□□ -1.18
CYLD-216ENST00000569891 RARSP54136 660 aaKnown RBP7.67□□□□□ -1.18
CYLD-216ENST00000569891 C1orf141Q5JVX7 400 aa7.67□□□□□ -1.18
CYLD-216ENST00000569891 HOXC9P31274 260 aa7.67□□□□□ -1.18
CYLD-216ENST00000569891 DZIP1LQ8IYY4 767 aaKnown RBP7.67□□□□□ -1.18
CYLD-216ENST00000569891 HDAC5Q9UQL6 1122 aa7.67□□□□□ -1.18
CYLD-216ENST00000569891 COL22A1Q8NFW1 1626 aaPredicted RBP7.66□□□□□ -1.18
CYLD-216ENST00000569891 C1orf167Q5SNV9 1468 aa7.66□□□□□ -1.18
CYLD-216ENST00000569891 SENP3-EIF4A1A0A087X0R7 540 aa7.66□□□□□ -1.18
CYLD-216ENST00000569891 ARHGAP45Q92619 1136 aa7.66□□□□□ -1.18
CYLD-216ENST00000569891 STK31Q9BXU1 1019 aa7.66□□□□□ -1.18
CYLD-216ENST00000569891 LTN1O94822 1766 aa7.66□□□□□ -1.18
CYLD-216ENST00000569891 ZBTB7CA1YPR0 619 aa7.66□□□□□ -1.18
CYLD-216ENST00000569891 EXOC6Q8TAG9 804 aa7.66□□□□□ -1.18
CYLD-216ENST00000569891 CRBNQ96SW2 442 aa7.66□□□□□ -1.18
CYLD-216ENST00000569891 IGSF1Q8N6C5 1336 aa7.66□□□□□ -1.18
CYLD-216ENST00000569891 GNAT3A8MTJ3 354 aa7.66□□□□□ -1.18
CYLD-216ENST00000569891 FOXO3O43524 673 aa7.66□□□□□ -1.18
CYLD-216ENST00000569891 EXOSC9Q06265 439 aaKnown RBP7.66□□□□□ -1.18
CYLD-216ENST00000569891 HSP90AB1P08238 724 aaKnown RBP7.65□□□□□ -1.18
CYLD-216ENST00000569891 BRPF1P55201 1214 aaPredicted RBP7.65□□□□□ -1.18
CYLD-216ENST00000569891 ZRANB1Q9UGI0 708 aa7.65□□□□□ -1.18
CYLD-216ENST00000569891 HSP90AB2PQ58FF8 381 aa7.65□□□□□ -1.19
CYLD-216ENST00000569891 RAPGEF4Q8WZA2 1011 aa7.65□□□□□ -1.19
CYLD-216ENST00000569891 TRIM35Q9UPQ4 493 aa7.65□□□□□ -1.19
CYLD-216ENST00000569891 KIAA0232Q92628 1395 aa7.64□□□□□ -1.19
CYLD-216ENST00000569891 CSB-PGBD3P0DP91 1061 aa7.64□□□□□ -1.19
CYLD-216ENST00000569891 CLUAP1Q96AJ1 413 aa7.64□□□□□ -1.19
CYLD-216ENST00000569891 GCP02774 474 aa7.64□□□□□ -1.19
CYLD-216ENST00000569891 KDRP35968 1356 aa7.64□□□□□ -1.19
CYLD-216ENST00000569891 TWISTNBQ3B726 338 aaPredicted RBP7.64□□□□□ -1.19
CYLD-216ENST00000569891 RANBP2P49792 3224 aaKnown RBP7.64□□□□□ -1.19
CYLD-216ENST00000569891 TEFQ10587 303 aa7.64□□□□□ -1.19
CYLD-216ENST00000569891 ATF7IPQ6VMQ6 1270 aa7.64□□□□□ -1.19
CYLD-216ENST00000569891 SPG7Q9UQ90 795 aa7.64□□□□□ -1.19
CYLD-216ENST00000569891 BRWD3Q6RI45 1802 aa7.63□□□□□ -1.19
CYLD-216ENST00000569891 ABCC6O95255 1503 aa7.63□□□□□ -1.19
CYLD-216ENST00000569891 ERICH6Q7L0X2 663 aa7.63□□□□□ -1.19
CYLD-216ENST00000569891 TSPYL4Q9UJ04 414 aa7.63□□□□□ -1.19
CYLD-216ENST00000569891 MST1RQ04912 1400 aa7.63□□□□□ -1.19
CYLD-216ENST00000569891 BPTFQ12830 3046 aa7.63□□□□□ -1.19
CYLD-216ENST00000569891 TATP17735 454 aaPredicted RBP7.63□□□□□ -1.19
CYLD-216ENST00000569891 ANP32AP39687 249 aaKnown RBP7.63□□□□□ -1.19
CYLD-216ENST00000569891 LTV1Q96GA3 475 aaPredicted RBP7.63□□□□□ -1.19
CYLD-216ENST00000569891 USP19O94966 1318 aa7.63□□□□□ -1.19
CYLD-216ENST00000569891 NUTM2GQ5VZR2 741 aa7.63□□□□□ -1.19
CYLD-216ENST00000569891 NCAPD2Q15021 1401 aa7.63□□□□□ -1.19
CYLD-216ENST00000569891 MAP3K5Q99683 1374 aa7.63□□□□□ -1.19
CYLD-216ENST00000569891 EYA1Q99502 592 aa7.63□□□□□ -1.19
CYLD-216ENST00000569891 N4BP2Q86UW6 1770 aaPredicted RBP7.62□□□□□ -1.19
CYLD-216ENST00000569891 PTPRCP08575 1304 aa7.62□□□□□ -1.19
CYLD-216ENST00000569891 TNS3Q68CZ2 1445 aa7.62□□□□□ -1.19
CYLD-216ENST00000569891 MVPQ14764 893 aaKnown RBP7.62□□□□□ -1.19
CYLD-216ENST00000569891 CCDC30Q5VVM6 783 aa7.62□□□□□ -1.19
CYLD-216ENST00000569891 PLIN1O60240 522 aa7.62□□□□□ -1.19
CYLD-216ENST00000569891 ITPRIPQ8IWB1 547 aa7.62□□□□□ -1.19
CYLD-216ENST00000569891 HSPA2P54652 639 aa7.62□□□□□ -1.19
CYLD-216ENST00000569891 ARHGEF25Q86VW2 580 aa7.62□□□□□ -1.19
CYLD-216ENST00000569891 ORAI2Q96SN7 254 aa7.62□□□□□ -1.19
CYLD-216ENST00000569891 UPF2Q9HAU5 1272 aaKnown RBP7.62□□□□□ -1.19
CYLD-216ENST00000569891 PAPPAQ13219 1627 aa7.62□□□□□ -1.19
CYLD-216ENST00000569891 TSR2Q969E8 191 aaKnown RBP7.61□□□□□ -1.19
CYLD-216ENST00000569891 BCAR3O75815 825 aa7.61□□□□□ -1.19
CYLD-216ENST00000569891 HOXB7P09629 217 aa7.61□□□□□ -1.19
CYLD-216ENST00000569891 TAF7Q15545 349 aaPredicted RBP7.61□□□□□ -1.19
CYLD-216ENST00000569891 AKAP4Q5JQC9 854 aa7.61□□□□□ -1.19
CYLD-216ENST00000569891 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.61□□□□□ -1.191e-7■■■□□ 18.9
CYLD-216ENST00000569891 AHDC1Q5TGY3 1603 aaPredicted RBP7.61□□□□□ -1.19
CYLD-216ENST00000569891 SLIT3O75094 1523 aa7.61□□□□□ -1.19
CYLD-216ENST00000569891 ZNF853P0CG23 659 aa7.61□□□□□ -1.19
CYLD-216ENST00000569891 ANKRD24Q8TF21 1146 aa7.61□□□□□ -1.19
CYLD-216ENST00000569891 PHACTR3Q96KR7 559 aa7.61□□□□□ -1.19
CYLD-216ENST00000569891 DAXXQ9UER7 740 aaPredicted RBP7.61□□□□□ -1.19
CYLD-216ENST00000569891 RREB1Q92766 1687 aa7.6□□□□□ -1.19
CYLD-216ENST00000569891 CHL1O00533 1208 aa7.6□□□□□ -1.19
CYLD-216ENST00000569891 HMMRO75330 724 aa7.6□□□□□ -1.19
CYLD-216ENST00000569891 MBIPQ9NS73 344 aa7.6□□□□□ -1.19
CYLD-216ENST00000569891 ZNF530Q6P9A1 599 aaPredicted RBP7.6□□□□□ -1.19
CYLD-216ENST00000569891 SLAIN2Q9P270 581 aa7.6□□□□□ -1.19
CYLD-216ENST00000569891 COG6Q9Y2V7 657 aa7.6□□□□□ -1.19
CYLD-216ENST00000569891 SSH1Q8WYL5 1049 aa7.6□□□□□ -1.19
CYLD-216ENST00000569891 OVOS2A0A0G2JMS6 1433 aa7.6□□□□□ -1.19
CYLD-216ENST00000569891 SPINK5Q9NQ38 1064 aaPredicted RBP7.6□□□□□ -1.19
CYLD-216ENST00000569891 NLRP2Q9NX02 1062 aa7.6□□□□□ -1.19
CYLD-216ENST00000569891 SPATA31A3Q5VYP0 1347 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms