RNA–Protein interactions for RNA: ENST00000569857.5

PKM-224, Transcript of pyruvate kinase M1/2, humanhuman

TSL 5

Gene PKM, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-224ENST00000569857 COL3A1P02461 1466 aaPredicted RBP16.59■□□□□ 0.25
PKM-224ENST00000569857 PARP4Q9UKK3 1724 aaKnown RBP16.59■□□□□ 0.25
PKM-224ENST00000569857 LRRC37A3O60309 1634 aa16.58■□□□□ 0.24
PKM-224ENST00000569857 FAM196AQ6ZSG2 479 aa16.57■□□□□ 0.24
PKM-224ENST00000569857 SPG7Q9UQ90 795 aa16.57■□□□□ 0.24
PKM-224ENST00000569857 CCDC184Q52MB2 194 aa16.56■□□□□ 0.24
PKM-224ENST00000569857 PLEKHO1Q53GL0 409 aaPredicted RBP16.56■□□□□ 0.24
PKM-224ENST00000569857 ACSBG1Q96GR2 724 aa16.56■□□□□ 0.24
PKM-224ENST00000569857 OVOS2A0A0G2JMS6 1433 aa16.56■□□□□ 0.24
PKM-224ENST00000569857 TNS2Q63HR2 1409 aa16.56■□□□□ 0.24
PKM-224ENST00000569857 TRIM37O94972 964 aa16.55■□□□□ 0.24
PKM-224ENST00000569857 DIEXFQ68CQ4 756 aaKnown RBP16.55■□□□□ 0.24
PKM-224ENST00000569857 NCAPD2Q15021 1401 aa16.54■□□□□ 0.24
PKM-224ENST00000569857 PRKAR2BP31323 418 aa16.54■□□□□ 0.24
PKM-224ENST00000569857 UPF1Q92900 1129 aaKnown RBP eCLIP16.54■□□□□ 0.24
PKM-224ENST00000569857 RGPD1P0DJD0 1748 aa16.54■□□□□ 0.24
PKM-224ENST00000569857 CYP27B1O15528 508 aa16.53■□□□□ 0.24
PKM-224ENST00000569857 WDR43Q15061 677 aaKnown RBP eCLIP16.53■□□□□ 0.241e-9■□□□□ 8.7
PKM-224ENST00000569857 ZNF530Q6P9A1 599 aaPredicted RBP16.53■□□□□ 0.24
PKM-224ENST00000569857 KAT6BQ8WYB5 2073 aa16.53■□□□□ 0.24
PKM-224ENST00000569857 PCDH11XQ9BZA7 1347 aa16.53■□□□□ 0.24
PKM-224ENST00000569857 PCDH11YQ9BZA8 1340 aa16.53■□□□□ 0.24
PKM-224ENST00000569857 SF3B2Q13435 895 aaKnown RBP16.52■□□□□ 0.24
PKM-224ENST00000569857 SYTL4Q96C24 671 aaPredicted RBP16.52■□□□□ 0.24
PKM-224ENST00000569857 KDRP35968 1356 aa16.52■□□□□ 0.23
PKM-224ENST00000569857 AMOTQ4VCS5 1084 aa16.51■□□□□ 0.23
PKM-224ENST00000569857 IFNL2Q8IZJ0 200 aa16.51■□□□□ 0.23
PKM-224ENST00000569857 RSPH6AQ9H0K4 717 aa16.51■□□□□ 0.23
PKM-224ENST00000569857 MRS2Q9HD23 443 aa16.51■□□□□ 0.23
PKM-224ENST00000569857 KCNQ2O43526 872 aa16.51■□□□□ 0.23
PKM-224ENST00000569857 MTHFSDQ2M296 383 aaKnown RBP16.51■□□□□ 0.23
PKM-224ENST00000569857 C1orf141Q5JVX7 400 aa16.51■□□□□ 0.23
PKM-224ENST00000569857 PTF1AQ7RTS3 328 aa16.51■□□□□ 0.23
PKM-224ENST00000569857 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.51■□□□□ 0.23
PKM-224ENST00000569857 FCHSD2O94868 740 aa16.5■□□□□ 0.23
PKM-224ENST00000569857 PHKG2P15735 406 aa16.5■□□□□ 0.23
PKM-224ENST00000569857 PHACTR3Q96KR7 559 aa16.5■□□□□ 0.23
PKM-224ENST00000569857 NEFMP07197 916 aa16.49■□□□□ 0.23
PKM-224ENST00000569857 PRIM1P49642 420 aaKnown RBP16.49■□□□□ 0.23
PKM-224ENST00000569857 APBA3O96018 575 aa16.48■□□□□ 0.23
PKM-224ENST00000569857 MPRIPQ6WCQ1 1025 aa16.48■□□□□ 0.23
PKM-224ENST00000569857 CCDC146Q8IYE0 955 aa16.48■□□□□ 0.23
PKM-224ENST00000569857 ADAMTS8Q9UP79 889 aa16.48■□□□□ 0.23
PKM-224ENST00000569857 SHANK3Q9BYB0 1731 aa16.48■□□□□ 0.23
PKM-224ENST00000569857 DEFB132Q7Z7B7 95 aa16.47■□□□□ 0.23
PKM-224ENST00000569857 PKD1L3Q7Z443 1732 aa16.46■□□□□ 0.23
PKM-224ENST00000569857 MAPK8IP3Q9UPT6 1336 aa16.45■□□□□ 0.22
PKM-224ENST00000569857 AKAP4Q5JQC9 854 aa16.45■□□□□ 0.22
PKM-224ENST00000569857 CCDC125Q86Z20 511 aa16.45■□□□□ 0.22
PKM-224ENST00000569857 GAS2L2Q8NHY3 880 aa16.45■□□□□ 0.22
PKM-224ENST00000569857 BCL11BQ9C0K0 894 aaPredicted RBP16.45■□□□□ 0.22
PKM-224ENST00000569857 PNNQ9H307 717 aaKnown RBP16.45■□□□□ 0.22
PKM-224ENST00000569857 SENP3-EIF4A1A0A087X0R7 540 aa16.44■□□□□ 0.22
PKM-224ENST00000569857 HSP90AB1P08238 724 aaKnown RBP16.44■□□□□ 0.22
PKM-224ENST00000569857 BAG6P46379 1132 aa16.44■□□□□ 0.22
PKM-224ENST00000569857 EN1Q05925 392 aaPredicted RBP16.44■□□□□ 0.22
PKM-224ENST00000569857 FAM9BQ8IZU0 186 aa16.44■□□□□ 0.22
PKM-224ENST00000569857 MIER1Q8N108 512 aa16.44■□□□□ 0.22
PKM-224ENST00000569857 NKX1-1Q15270 411 aaPredicted RBP16.43■□□□□ 0.22
PKM-224ENST00000569857 PLEKHF1Q96S99 279 aa16.43■□□□□ 0.22
PKM-224ENST00000569857 LGR6Q9HBX8 967 aa16.43■□□□□ 0.22
PKM-224ENST00000569857 SBF2Q86WG5 1849 aa16.42■□□□□ 0.22
PKM-224ENST00000569857 CABP4P57796 275 aa16.42■□□□□ 0.22
PKM-224ENST00000569857 NEUROD2Q15784 382 aa16.42■□□□□ 0.22
PKM-224ENST00000569857 DCAF5Q96JK2 942 aa16.42■□□□□ 0.22
PKM-224ENST00000569857 GNAT3A8MTJ3 354 aa16.41■□□□□ 0.22
PKM-224ENST00000569857 PNISRQ8TF01 805 aaKnown RBP16.41■□□□□ 0.22
PKM-224ENST00000569857 RRP7AQ9Y3A4 280 aaKnown RBP16.41■□□□□ 0.22
PKM-224ENST00000569857 BCL9O00512 1426 aa16.41■□□□□ 0.22
PKM-224ENST00000569857 DOT1LQ8TEK3 1739 aa16.41■□□□□ 0.22
PKM-224ENST00000569857 RNMTO43148 476 aaKnown RBP16.4■□□□□ 0.22
PKM-224ENST00000569857 EZH2Q15910 746 aaKnown RBP16.4■□□□□ 0.22
PKM-224ENST00000569857 RUNDC1Q96C34 613 aa16.4■□□□□ 0.22
PKM-224ENST00000569857 TMOD3Q9NYL9 352 aa16.4■□□□□ 0.22
PKM-224ENST00000569857 PLEKHG2Q9H7P9 1386 aa16.4■□□□□ 0.22
PKM-224ENST00000569857 DCTN1Q14203 1278 aa16.39■□□□□ 0.21
PKM-224ENST00000569857 PIGBQ92521 554 aa16.39■□□□□ 0.21
PKM-224ENST00000569857 RTF1Q92541 710 aaKnown RBP16.39■□□□□ 0.21
PKM-224ENST00000569857 MAP3K5Q99683 1374 aa16.39■□□□□ 0.21
PKM-224ENST00000569857 KDM6AO15550 1401 aaPredicted RBP16.39■□□□□ 0.21
PKM-224ENST00000569857 NFE2L2Q16236 605 aa16.38■□□□□ 0.21
PKM-224ENST00000569857 NFATC2IPQ8NCF5 419 aa16.38■□□□□ 0.21
PKM-224ENST00000569857 ERVV-2B6SEH9 535 aa16.38■□□□□ 0.21
PKM-224ENST00000569857 RIPK4P57078 832 aa16.38■□□□□ 0.21
PKM-224ENST00000569857 MCM10Q7L590 875 aa16.38■□□□□ 0.21
PKM-224ENST00000569857 IL17REQ8NFR9 667 aa16.38■□□□□ 0.21
PKM-224ENST00000569857 NHSQ6T4R5 1651 aa16.38■□□□□ 0.21
PKM-224ENST00000569857 TNS1Q9HBL0 1735 aaKnown RBP16.37■□□□□ 0.21
PKM-224ENST00000569857 TOGARAM1Q9Y4F4 1720 aa16.37■□□□□ 0.21
PKM-224ENST00000569857 APAF1O14727 1248 aa16.36■□□□□ 0.21
PKM-224ENST00000569857 TMPOP42166 694 aaKnown RBP16.36■□□□□ 0.21
PKM-224ENST00000569857 KCNQ4P56696 695 aa16.36■□□□□ 0.21
PKM-224ENST00000569857 TEFQ10587 303 aa16.36■□□□□ 0.21
PKM-224ENST00000569857 CAMKK2Q96RR4 588 aa16.36■□□□□ 0.21
PKM-224ENST00000569857 BTAF1O14981 1849 aa16.35■□□□□ 0.21
PKM-224ENST00000569857 ITGB4P16144 1822 aa16.35■□□□□ 0.21
PKM-224ENST00000569857 CCER2I3L3R5 266 aa16.35■□□□□ 0.21
PKM-224ENST00000569857 PLSCR1O15162 318 aa16.35■□□□□ 0.21
PKM-224ENST00000569857 THUMPD2Q9BTF0 503 aaKnown RBP16.35■□□□□ 0.21
PKM-224ENST00000569857 SLC52A2Q9HAB3 445 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms