RNA–Protein interactions for RNA: ENST00000569801.5

SNX29-208, Transcript of sorting nexin 29, humanhuman

TSL 4

Gene SNX29, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-208ENST00000569801 FAM122AQ96E09 287 aa12.25□□□□□ -0.45
SNX29-208ENST00000569801 RAPGEFL1Q9UHV5 662 aa12.25□□□□□ -0.45
SNX29-208ENST00000569801 ADGRF5Q8IZF2 1346 aa12.25□□□□□ -0.45
SNX29-208ENST00000569801 GPRASP1Q5JY77 1395 aa12.25□□□□□ -0.45
SNX29-208ENST00000569801 EXOC5O00471 708 aa12.24□□□□□ -0.45
SNX29-208ENST00000569801 RAB3GAP2Q9H2M9 1393 aa12.24□□□□□ -0.45
SNX29-208ENST00000569801 PLEKHH1Q9ULM0 1364 aa12.23□□□□□ -0.45
SNX29-208ENST00000569801 ADRA2BP18089 450 aa12.23□□□□□ -0.45
SNX29-208ENST00000569801 RGL3Q3MIN7 710 aa12.23□□□□□ -0.45
SNX29-208ENST00000569801 SMIM5Q71RC9 77 aa12.23□□□□□ -0.45
SNX29-208ENST00000569801 CDCA7Q9BWT1 371 aaPredicted RBP12.23□□□□□ -0.45
SNX29-208ENST00000569801 STK26Q9P289 416 aa12.23□□□□□ -0.45
SNX29-208ENST00000569801 COL6A3P12111 3177 aa12.23□□□□□ -0.45
SNX29-208ENST00000569801 PIK3C2GO75747 1445 aa12.22□□□□□ -0.45
SNX29-208ENST00000569801 GPR101Q96P66 508 aaPredicted RBP12.22□□□□□ -0.45
SNX29-208ENST00000569801 KNDC1Q76NI1 1749 aa12.22□□□□□ -0.45
SNX29-208ENST00000569801 ACIN1Q9UKV3 1341 aaKnown RBP12.21□□□□□ -0.45
SNX29-208ENST00000569801 CA12O43570 354 aa12.21□□□□□ -0.45
SNX29-208ENST00000569801 TGFB2P61812 414 aa12.21□□□□□ -0.45
SNX29-208ENST00000569801 PKD1L3Q7Z443 1732 aa12.2□□□□□ -0.46
SNX29-208ENST00000569801 ZC3H4Q9UPT8 1303 aaKnown RBP12.2□□□□□ -0.46
SNX29-208ENST00000569801 GRM1Q13255 1194 aa12.2□□□□□ -0.46
SNX29-208ENST00000569801 NUTM2GQ5VZR2 741 aa12.2□□□□□ -0.46
SNX29-208ENST00000569801 TOM1L2Q6ZVM7 507 aa12.2□□□□□ -0.46
SNX29-208ENST00000569801 COL5A2P05997 1499 aaPredicted RBP12.2□□□□□ -0.46
SNX29-208ENST00000569801 ALS2Q96Q42 1657 aa12.19□□□□□ -0.46
SNX29-208ENST00000569801 CAPNS2Q96L46 248 aa12.19□□□□□ -0.46
SNX29-208ENST00000569801 ABT1Q9ULW3 272 aaKnown RBP12.19□□□□□ -0.46
SNX29-208ENST00000569801 TUBGCP6Q96RT7 1819 aa12.18□□□□□ -0.46
SNX29-208ENST00000569801 TRIOBPQ9H2D6 2365 aa12.18□□□□□ -0.46
SNX29-208ENST00000569801 TRPM3Q9HCF6 1732 aaPredicted RBP12.17□□□□□ -0.46
SNX29-208ENST00000569801 CRYBG1Q9Y4K1 1723 aa12.17□□□□□ -0.46
SNX29-208ENST00000569801 DPEP1P16444 411 aa12.17□□□□□ -0.46
SNX29-208ENST00000569801 TMEM132EQ6IEE7 984 aa12.17□□□□□ -0.46
SNX29-208ENST00000569801 PAXIP1Q6ZW49 1069 aaPredicted RBP12.17□□□□□ -0.46
SNX29-208ENST00000569801 ABCC11Q96J66 1382 aa12.17□□□□□ -0.46
SNX29-208ENST00000569801 ITGBL1O95965 494 aaPredicted RBP12.16□□□□□ -0.46
SNX29-208ENST00000569801 YTHDC2Q9H6S0 1430 aaKnown RBP12.16□□□□□ -0.46
SNX29-208ENST00000569801 CASP8AP2Q9UKL3 1982 aa12.16□□□□□ -0.46
SNX29-208ENST00000569801 ECE1P42892 770 aa12.15□□□□□ -0.46
SNX29-208ENST00000569801 CYP4F22Q6NT55 531 aa12.15□□□□□ -0.46
SNX29-208ENST00000569801 FLAD1Q8NFF5 587 aa12.15□□□□□ -0.46
SNX29-208ENST00000569801 DCAF5Q96JK2 942 aa12.15□□□□□ -0.46
SNX29-208ENST00000569801 NHSQ6T4R5 1651 aa12.15□□□□□ -0.46
SNX29-208ENST00000569801 CPDO75976 1380 aa12.15□□□□□ -0.46
SNX29-208ENST00000569801 LTBP1Q14766 1721 aa12.14□□□□□ -0.47
SNX29-208ENST00000569801 C14orf93Q9H972 538 aaKnown RBP12.14□□□□□ -0.47
SNX29-208ENST00000569801 AOC2O75106 756 aa12.13□□□□□ -0.47
SNX29-208ENST00000569801 CCNL1Q9UK58 526 aaPredicted RBP12.13□□□□□ -0.47
SNX29-208ENST00000569801 TRPM1Q7Z4N2 1603 aa12.12□□□□□ -0.47
SNX29-208ENST00000569801 RASSF7Q02833 373 aa12.12□□□□□ -0.47
SNX29-208ENST00000569801 CFAP70Q5T0N1 1121 aa12.12□□□□□ -0.47
SNX29-208ENST00000569801 HPS5Q9UPZ3 1129 aa12.12□□□□□ -0.47
SNX29-208ENST00000569801 LMO7Q8WWI1 1683 aa12.12□□□□□ -0.47
SNX29-208ENST00000569801 ERBB3P21860 1342 aa12.11□□□□□ -0.47
SNX29-208ENST00000569801 ADGRB1O14514 1584 aa12.11□□□□□ -0.47
SNX29-208ENST00000569801 MAP2K2P36507 400 aa12.11□□□□□ -0.47
SNX29-208ENST00000569801 DPY19L2Q6NUT2 758 aa12.11□□□□□ -0.47
SNX29-208ENST00000569801 LDHDQ86WU2 507 aa12.11□□□□□ -0.47
SNX29-208ENST00000569801 MINK1Q8N4C8 1332 aaPredicted RBP12.11□□□□□ -0.47
SNX29-208ENST00000569801 RGPD8O14715 1765 aaPredicted RBP12.1□□□□□ -0.47
SNX29-208ENST00000569801 KCNA3P22001 575 aa12.1□□□□□ -0.47
SNX29-208ENST00000569801 SIRT1Q96EB6 747 aa12.1□□□□□ -0.47
SNX29-208ENST00000569801 AKAP12Q02952 1782 aa12.1□□□□□ -0.47
SNX29-208ENST00000569801 ZBTB7CA1YPR0 619 aa12.09□□□□□ -0.47
SNX29-208ENST00000569801 NGDNQ8NEJ9 315 aaKnown RBP12.09□□□□□ -0.47
SNX29-208ENST00000569801 COL18A1P39060 1754 aa12.09□□□□□ -0.47
SNX29-208ENST00000569801 BTAF1O14981 1849 aa12.09□□□□□ -0.47
SNX29-208ENST00000569801 LMNB1P20700 586 aa12.08□□□□□ -0.48
SNX29-208ENST00000569801 DALRD3Q5D0E6 543 aaKnown RBP12.08□□□□□ -0.48
SNX29-208ENST00000569801 PIM2Q9P1W9 311 aa12.08□□□□□ -0.48
SNX29-208ENST00000569801 OTUD5Q96G74 571 aa12.07□□□□□ -0.48
SNX29-208ENST00000569801 PRAM1Q96QH2 718 aa12.07□□□□□ -0.48
SNX29-208ENST00000569801 KDM6AO15550 1401 aaPredicted RBP12.06□□□□□ -0.48
SNX29-208ENST00000569801 MMP10P09238 476 aa12.06□□□□□ -0.48
SNX29-208ENST00000569801 CCDC24Q8N4L8 307 aa12.06□□□□□ -0.48
SNX29-208ENST00000569801 THSD7BQ9C0I4 1608 aa12.06□□□□□ -0.48
SNX29-208ENST00000569801 SAFB2Q14151 953 aaKnown RBP eCLIP12.05□□□□□ -0.48
SNX29-208ENST00000569801 DCAF11Q8TEB1 546 aa12.05□□□□□ -0.48
SNX29-208ENST00000569801 KDM2AQ9Y2K7 1162 aa12.05□□□□□ -0.48
SNX29-208ENST00000569801 WDR17Q8IZU2 1322 aa12.05□□□□□ -0.48
SNX29-208ENST00000569801 ANKARQ7Z5J8 1434 aa12.04□□□□□ -0.48
SNX29-208ENST00000569801 BRPF1P55201 1214 aaPredicted RBP12.04□□□□□ -0.48
SNX29-208ENST00000569801 CTU1Q7Z7A3 348 aaKnown RBP12.04□□□□□ -0.48
SNX29-208ENST00000569801 AMIGO3Q86WK7 504 aa12.04□□□□□ -0.48
SNX29-208ENST00000569801 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.04□□□□□ -0.48
SNX29-208ENST00000569801 CARD10Q9BWT7 1032 aa12.04□□□□□ -0.48
SNX29-208ENST00000569801 PIK3C2AO00443 1686 aa12.03□□□□□ -0.48
SNX29-208ENST00000569801 PHF14O94880 888 aa12.03□□□□□ -0.48
SNX29-208ENST00000569801 GCP02774 474 aa12.03□□□□□ -0.48
SNX29-208ENST00000569801 N4BP2Q86UW6 1770 aaPredicted RBP12.02□□□□□ -0.48
SNX29-208ENST00000569801 CIAPIN1Q6FI81 312 aa12.02□□□□□ -0.49
SNX29-208ENST00000569801 SYTL4Q96C24 671 aaPredicted RBP12.02□□□□□ -0.49
SNX29-208ENST00000569801 POGKQ9P215 609 aa12.02□□□□□ -0.49
SNX29-208ENST00000569801 TRAK1Q9UPV9 953 aa12.02□□□□□ -0.49
SNX29-208ENST00000569801 ERBB4Q15303 1308 aa12.02□□□□□ -0.49
SNX29-208ENST00000569801 KIAA1551Q9HCM1 1747 aa12.01□□□□□ -0.49
SNX29-208ENST00000569801 CHRDL2Q6WN34 429 aa12.01□□□□□ -0.49
SNX29-208ENST00000569801 CNTROBQ8N137 903 aa12.01□□□□□ -0.49
SNX29-208ENST00000569801 STAC3Q96MF2 364 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms