RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 IGSF1Q8N6C5 1336 aa9.97□□□□□ -0.81
CDH13-214ENST00000569455 KDRP35968 1356 aa9.97□□□□□ -0.81
CDH13-214ENST00000569455 COL18A1P39060 1754 aa9.96□□□□□ -0.81
CDH13-214ENST00000569455 PLEKHG5O94827 1062 aa9.96□□□□□ -0.82
CDH13-214ENST00000569455 ZC3H6P61129 1189 aaKnown RBP9.96□□□□□ -0.82
CDH13-214ENST00000569455 CALD1Q05682 793 aaKnown RBP9.96□□□□□ -0.82
CDH13-214ENST00000569455 VPS72Q15906 364 aa9.96□□□□□ -0.82
CDH13-214ENST00000569455 DUSP27Q5VZP5 1158 aa9.96□□□□□ -0.82
CDH13-214ENST00000569455 BTG4Q9NY30 223 aa9.96□□□□□ -0.82
CDH13-214ENST00000569455 RCAN3Q9UKA8 241 aa9.96□□□□□ -0.82
CDH13-214ENST00000569455 NRAPQ86VF7 1730 aa9.96□□□□□ -0.82
CDH13-214ENST00000569455 RGPD5Q99666 1765 aa9.96□□□□□ -0.82
CDH13-214ENST00000569455 AEBP1Q8IUX7 1158 aa9.95□□□□□ -0.82
CDH13-214ENST00000569455 TRMT2AQ8IZ69 625 aaKnown RBP9.95□□□□□ -0.82
CDH13-214ENST00000569455 LTV1Q96GA3 475 aaPredicted RBP9.95□□□□□ -0.82
CDH13-214ENST00000569455 PHACTR3Q96KR7 559 aa9.95□□□□□ -0.82
CDH13-214ENST00000569455 EYA1Q99502 592 aa9.95□□□□□ -0.82
CDH13-214ENST00000569455 IL16Q14005 1332 aa9.95□□□□□ -0.82
CDH13-214ENST00000569455 FAM208AQ9UK61 1670 aaKnown RBP9.95□□□□□ -0.82
CDH13-214ENST00000569455 RGPD2P0DJD1 1756 aa9.94□□□□□ -0.82
CDH13-214ENST00000569455 BAG6P46379 1132 aa9.94□□□□□ -0.82
CDH13-214ENST00000569455 EVA1CP58658 441 aa9.94□□□□□ -0.82
CDH13-214ENST00000569455 TRIM35Q9UPQ4 493 aa9.94□□□□□ -0.82
CDH13-214ENST00000569455 THRAP3Q9Y2W1 955 aaKnown RBP9.94□□□□□ -0.82
CDH13-214ENST00000569455 CAMTA1Q9Y6Y1 1673 aa9.93□□□□□ -0.82
CDH13-214ENST00000569455 ONECUT3O60422 494 aaPredicted RBP9.93□□□□□ -0.82
CDH13-214ENST00000569455 FKBP8Q14318 412 aa9.93□□□□□ -0.82
CDH13-214ENST00000569455 GAS2L2Q8NHY3 880 aa9.93□□□□□ -0.82
CDH13-214ENST00000569455 ANKRD24Q8TF21 1146 aa9.93□□□□□ -0.82
CDH13-214ENST00000569455 COL5A2P05997 1499 aaPredicted RBP9.92□□□□□ -0.82
CDH13-214ENST00000569455 SPATA31A5Q5VU36 1347 aa9.92□□□□□ -0.82
CDH13-214ENST00000569455 RNF123Q5XPI4 1314 aa9.92□□□□□ -0.82
CDH13-214ENST00000569455 SPATA31A7Q8IWB4 1347 aa9.92□□□□□ -0.82
CDH13-214ENST00000569455 WDR17Q8IZU2 1322 aa9.92□□□□□ -0.82
CDH13-214ENST00000569455 CHRNA2Q15822 529 aa9.92□□□□□ -0.82
CDH13-214ENST00000569455 ERICH6BQ5W0A0 696 aa9.92□□□□□ -0.82
CDH13-214ENST00000569455 CDCA7Q9BWT1 371 aaPredicted RBP9.92□□□□□ -0.82
CDH13-214ENST00000569455 SPINK5Q9NQ38 1064 aaPredicted RBP9.92□□□□□ -0.82
CDH13-214ENST00000569455 CRB1P82279 1406 aa9.91□□□□□ -0.82
CDH13-214ENST00000569455 R3HDM1Q15032 1099 aaKnown RBP9.91□□□□□ -0.82
CDH13-214ENST00000569455 BARGINQ6ZT62 677 aa9.91□□□□□ -0.82
CDH13-214ENST00000569455 AXIN2Q9Y2T1 843 aa9.91□□□□□ -0.82
CDH13-214ENST00000569455 NCAPD2Q15021 1401 aa9.9□□□□□ -0.82
CDH13-214ENST00000569455 ERBB3P21860 1342 aa9.9□□□□□ -0.82
CDH13-214ENST00000569455 SPATA31A1Q5TZJ5 1347 aa9.9□□□□□ -0.82
CDH13-214ENST00000569455 DCAF8L1A6NGE4 600 aa9.9□□□□□ -0.82
CDH13-214ENST00000569455 HTATSF1O43719 755 aaKnown RBP9.9□□□□□ -0.82
CDH13-214ENST00000569455 CT47B1P0C2W7 299 aaPredicted RBP9.9□□□□□ -0.82
CDH13-214ENST00000569455 GNAI1P63096 354 aa9.9□□□□□ -0.82
CDH13-214ENST00000569455 NBPF6Q5VWK0 638 aa9.9□□□□□ -0.82
CDH13-214ENST00000569455 SEPT12Q8IYM1 358 aa9.9□□□□□ -0.82
CDH13-214ENST00000569455 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.9□□□□□ -0.82
CDH13-214ENST00000569455 RTF1Q92541 710 aaKnown RBP9.9□□□□□ -0.82
CDH13-214ENST00000569455 NBPF4Q96M43 638 aa9.9□□□□□ -0.82
CDH13-214ENST00000569455 CARD10Q9BWT7 1032 aa9.9□□□□□ -0.82
CDH13-214ENST00000569455 PLEKHG2Q9H7P9 1386 aa9.89□□□□□ -0.83
CDH13-214ENST00000569455 FANCIQ9NVI1 1328 aa9.89□□□□□ -0.83
CDH13-214ENST00000569455 CSB-PGBD3P0DP91 1061 aa9.89□□□□□ -0.83
CDH13-214ENST00000569455 RRP1P56182 461 aaKnown RBP9.89□□□□□ -0.83
CDH13-214ENST00000569455 MTHFSDQ2M296 383 aaKnown RBP9.89□□□□□ -0.83
CDH13-214ENST00000569455 IFT57Q9NWB7 429 aa9.89□□□□□ -0.83
CDH13-214ENST00000569455 AMOTQ4VCS5 1084 aa9.88□□□□□ -0.83
CDH13-214ENST00000569455 PLEKHO1Q53GL0 409 aaPredicted RBP9.88□□□□□ -0.83
CDH13-214ENST00000569455 LARP1Q6PKG0 1096 aaKnown RBP9.88□□□□□ -0.83
CDH13-214ENST00000569455 TOM1L2Q6ZVM7 507 aa9.88□□□□□ -0.83
CDH13-214ENST00000569455 KRT27Q7Z3Y8 459 aa9.88□□□□□ -0.83
CDH13-214ENST00000569455 USHBP1Q8N6Y0 703 aa9.88□□□□□ -0.83
CDH13-214ENST00000569455 STRN4Q9NRL3 753 aa9.88□□□□□ -0.83
CDH13-214ENST00000569455 NLRP2Q9NX02 1062 aa9.88□□□□□ -0.83
CDH13-214ENST00000569455 CCDC9Q9Y3X0 531 aaKnown RBP9.88□□□□□ -0.83
CDH13-214ENST00000569455 GNAT3A8MTJ3 354 aa9.87□□□□□ -0.83
CDH13-214ENST00000569455 CFAP44Q96MT7 982 aa9.87□□□□□ -0.83
CDH13-214ENST00000569455 LAS1LQ9Y4W2 734 aaKnown RBP9.87□□□□□ -0.83
CDH13-214ENST00000569455 MAP3K5Q99683 1374 aa9.87□□□□□ -0.83
CDH13-214ENST00000569455 DISP2A7MBM2 1401 aa9.86□□□□□ -0.83
CDH13-214ENST00000569455 IRX6P78412 446 aaPredicted RBP9.86□□□□□ -0.83
CDH13-214ENST00000569455 EN1Q05925 392 aaPredicted RBP9.86□□□□□ -0.83
CDH13-214ENST00000569455 RAPGEF4Q8WZA2 1011 aa9.86□□□□□ -0.83
CDH13-214ENST00000569455 TSR2Q969E8 191 aaKnown RBP9.86□□□□□ -0.83
CDH13-214ENST00000569455 THUMPD2Q9BTF0 503 aaKnown RBP9.86□□□□□ -0.83
CDH13-214ENST00000569455 VIRMAQ69YN4 1812 aaKnown RBP9.86□□□□□ -0.83
CDH13-214ENST00000569455 LRRC37A3O60309 1634 aa9.85□□□□□ -0.83
CDH13-214ENST00000569455 TNS1Q9HBL0 1735 aaKnown RBP9.85□□□□□ -0.83
CDH13-214ENST00000569455 PARP4Q9UKK3 1724 aaKnown RBP9.85□□□□□ -0.83
CDH13-214ENST00000569455 WNK3Q9BYP7 1800 aa9.85□□□□□ -0.83
CDH13-214ENST00000569455 ZNF853P0CG23 659 aa9.85□□□□□ -0.83
CDH13-214ENST00000569455 TATP17735 454 aaPredicted RBP9.85□□□□□ -0.83
CDH13-214ENST00000569455 EXOSC9Q06265 439 aaKnown RBP9.85□□□□□ -0.83
CDH13-214ENST00000569455 DCTN1Q14203 1278 aa9.85□□□□□ -0.83
CDH13-214ENST00000569455 ZNF784Q8NCA9 323 aaPredicted RBP9.85□□□□□ -0.83
CDH13-214ENST00000569455 ZNF428Q96B54 188 aa9.85□□□□□ -0.83
CDH13-214ENST00000569455 THSD7AQ9UPZ6 1657 aa9.85□□□□□ -0.83
CDH13-214ENST00000569455 C1orf141Q5JVX7 400 aa9.84□□□□□ -0.83
CDH13-214ENST00000569455 ZNF530Q6P9A1 599 aaPredicted RBP9.84□□□□□ -0.83
CDH13-214ENST00000569455 MCM10Q7L590 875 aa9.84□□□□□ -0.83
CDH13-214ENST00000569455 MBIPQ9NS73 344 aa9.84□□□□□ -0.83
CDH13-214ENST00000569455 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.84□□□□□ -0.83
CDH13-214ENST00000569455 PKD1L3Q7Z443 1732 aa9.83□□□□□ -0.84
CDH13-214ENST00000569455 CHL1O00533 1208 aa9.83□□□□□ -0.84
CDH13-214ENST00000569455 IL2RBP14784 551 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms