RNA–Protein interactions for RNA: ENST00000568444.1

KLHDC4-222, Transcript of kelch domain containing 4, human

TSL 3

Gene KLHDC4, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC4-222	ENST00000568444	RGS17	Q9UGC6	210 aa	Predicted RBP	18.94	■□□□□ 0.62
KLHDC4-222	ENST00000568444	MAPK8IP3	Q9UPT6	1336 aa		18.94	■□□□□ 0.62
KLHDC4-222	ENST00000568444	BARGIN	Q6ZT62	677 aa		18.93	■□□□□ 0.62
KLHDC4-222	ENST00000568444	DISP2	A7MBM2	1401 aa		18.92	■□□□□ 0.62
KLHDC4-222	ENST00000568444	OVOS2	A0A0G2JMS6	1433 aa		18.91	■□□□□ 0.62
KLHDC4-222	ENST00000568444	RBM6	P78332	1123 aa	Known RBP	18.91	■□□□□ 0.62
KLHDC4-222	ENST00000568444	CDCA7	Q9BWT1	371 aa	Predicted RBP	18.91	■□□□□ 0.62
KLHDC4-222	ENST00000568444	LRRC37A3	O60309	1634 aa		18.9	■□□□□ 0.62
KLHDC4-222	ENST00000568444	POTEA	Q6S8J7	498 aa		18.9	■□□□□ 0.62
KLHDC4-222	ENST00000568444	RUNDC1	Q96C34	613 aa		18.9	■□□□□ 0.62
KLHDC4-222	ENST00000568444	THSD7A	Q9UPZ6	1657 aa		18.89	■□□□□ 0.61
KLHDC4-222	ENST00000568444	PKD1L3	Q7Z443	1732 aa		18.89	■□□□□ 0.61
KLHDC4-222	ENST00000568444	RXRB	P28702	533 aa		18.89	■□□□□ 0.61
KLHDC4-222	ENST00000568444	PLEKHO1	Q53GL0	409 aa	Predicted RBP	18.89	■□□□□ 0.61
KLHDC4-222	ENST00000568444	PLEKHF1	Q96S99	279 aa		18.89	■□□□□ 0.61
KLHDC4-222	ENST00000568444	SPG7	Q9UQ90	795 aa		18.88	■□□□□ 0.61
KLHDC4-222	ENST00000568444	TNS2	Q63HR2	1409 aa		18.88	■□□□□ 0.61
KLHDC4-222	ENST00000568444	DDB1	Q16531	1140 aa		18.87	■□□□□ 0.61
KLHDC4-222	ENST00000568444	AMOT	Q4VCS5	1084 aa		18.87	■□□□□ 0.61
KLHDC4-222	ENST00000568444	ZCRB1	Q8TBF4	217 aa	Known RBP	18.87	■□□□□ 0.61
KLHDC4-222	ENST00000568444	PHACTR3	Q96KR7	559 aa		18.87	■□□□□ 0.61
KLHDC4-222	ENST00000568444	PLEKHG2	Q9H7P9	1386 aa		18.87	■□□□□ 0.61
KLHDC4-222	ENST00000568444	EXOC5	O00471	708 aa		18.86	■□□□□ 0.61
KLHDC4-222	ENST00000568444	ZNF530	Q6P9A1	599 aa	Predicted RBP	18.86	■□□□□ 0.61
KLHDC4-222	ENST00000568444	SHANK3	Q9BYB0	1731 aa		18.86	■□□□□ 0.61
KLHDC4-222	ENST00000568444	SENP3-EIF4A1	A0A087X0R7	540 aa		18.85	■□□□□ 0.61
KLHDC4-222	ENST00000568444	MTHFSD	Q2M296	383 aa	Known RBP	18.85	■□□□□ 0.61
KLHDC4-222	ENST00000568444	SEPT12	Q8IYM1	358 aa		18.85	■□□□□ 0.61
KLHDC4-222	ENST00000568444	GAS2L2	Q8NHY3	880 aa		18.85	■□□□□ 0.61
KLHDC4-222	ENST00000568444	PCDH11X	Q9BZA7	1347 aa		18.84	■□□□□ 0.61
KLHDC4-222	ENST00000568444	PCDH11Y	Q9BZA8	1340 aa		18.84	■□□□□ 0.61
KLHDC4-222	ENST00000568444	C1orf141	Q5JVX7	400 aa		18.84	■□□□□ 0.61
KLHDC4-222	ENST00000568444	DDX54	Q8TDD1	881 aa	Known RBP	18.84	■□□□□ 0.61
KLHDC4-222	ENST00000568444	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	18.84	■□□□□ 0.61
KLHDC4-222	ENST00000568444	APAF1	O14727	1248 aa		18.83	■□□□□ 0.6
KLHDC4-222	ENST00000568444	ONECUT3	O60422	494 aa	Predicted RBP	18.83	■□□□□ 0.6
KLHDC4-222	ENST00000568444	NFE2L2	Q16236	605 aa		18.83	■□□□□ 0.6
KLHDC4-222	ENST00000568444	RRP7A	Q9Y3A4	280 aa	Known RBP	18.83	■□□□□ 0.6
KLHDC4-222	ENST00000568444	PDE3B	Q13370	1112 aa		18.82	■□□□□ 0.6
KLHDC4-222	ENST00000568444	NEUROD2	Q15784	382 aa		18.82	■□□□□ 0.6
KLHDC4-222	ENST00000568444	RGS12	O14924	1447 aa		18.82	■□□□□ 0.6
KLHDC4-222	ENST00000568444	TMPO	P42166	694 aa	Known RBP	18.81	■□□□□ 0.6
KLHDC4-222	ENST00000568444	IFNL2	Q8IZJ0	200 aa		18.81	■□□□□ 0.6
KLHDC4-222	ENST00000568444	AKAP4	Q5JQC9	854 aa		18.8	■□□□□ 0.6
KLHDC4-222	ENST00000568444	DLG5	Q8TDM6	1919 aa		18.8	■□□□□ 0.6
KLHDC4-222	ENST00000568444	MAP3K5	Q99683	1374 aa		18.8	■□□□□ 0.6
KLHDC4-222	ENST00000568444	BRWD3	Q6RI45	1802 aa		18.79	■□□□□ 0.6
KLHDC4-222	ENST00000568444	CYP27B1	O15528	508 aa		18.79	■□□□□ 0.6
KLHDC4-222	ENST00000568444	PHKG2	P15735	406 aa		18.79	■□□□□ 0.6
KLHDC4-222	ENST00000568444	RIPK4	P57078	832 aa		18.79	■□□□□ 0.6
KLHDC4-222	ENST00000568444	SALL2	Q9Y467	1007 aa	Predicted RBP	18.79	■□□□□ 0.6
KLHDC4-222	ENST00000568444	GNAT3	A8MTJ3	354 aa		18.78	■□□□□ 0.6
KLHDC4-222	ENST00000568444	HNRNPU	Q00839	825 aa	Known RBP eCLIP	18.77	■□□□□ 0.6
KLHDC4-222	ENST00000568444	MARCH10	Q8NA82	808 aa	Predicted RBP	18.77	■□□□□ 0.6
KLHDC4-222	ENST00000568444	RTF1	Q92541	710 aa	Known RBP	18.77	■□□□□ 0.6
KLHDC4-222	ENST00000568444	HSP90AB1	P08238	724 aa	Known RBP	18.76	■□□□□ 0.59
KLHDC4-222	ENST00000568444	LMOD3	Q0VAK6	560 aa		18.76	■□□□□ 0.59
KLHDC4-222	ENST00000568444	KRT27	Q7Z3Y8	459 aa		18.76	■□□□□ 0.59
KLHDC4-222	ENST00000568444	MPRIP	Q6WCQ1	1025 aa		18.75	■□□□□ 0.59
KLHDC4-222	ENST00000568444	YTHDC1	Q96MU7	727 aa	Known RBP	18.75	■□□□□ 0.59
KLHDC4-222	ENST00000568444	FAM182B	Q5T319	152 aa		18.74	■□□□□ 0.59
KLHDC4-222	ENST00000568444	VIRMA	Q69YN4	1812 aa	Known RBP	18.74	■□□□□ 0.59
KLHDC4-222	ENST00000568444	DOT1L	Q8TEK3	1739 aa		18.74	■□□□□ 0.59
KLHDC4-222	ENST00000568444	KDM6A	O15550	1401 aa	Predicted RBP	18.74	■□□□□ 0.59
KLHDC4-222	ENST00000568444	DCTN1	Q14203	1278 aa		18.73	■□□□□ 0.59
KLHDC4-222	ENST00000568444	MCM10	Q7L590	875 aa		18.73	■□□□□ 0.59
KLHDC4-222	ENST00000568444	DCAF5	Q96JK2	942 aa		18.73	■□□□□ 0.59
KLHDC4-222	ENST00000568444	SCN11A	Q9UI33	1791 aa		18.73	■□□□□ 0.59
KLHDC4-222	ENST00000568444	TOGARAM1	Q9Y4F4	1720 aa		18.72	■□□□□ 0.59
KLHDC4-222	ENST00000568444	HTATSF1	O43719	755 aa	Known RBP	18.72	■□□□□ 0.59
KLHDC4-222	ENST00000568444	TRIM35	Q9UPQ4	493 aa		18.72	■□□□□ 0.59
KLHDC4-222	ENST00000568444	ADAMTS7	Q9UKP4	1686 aa		18.71	■□□□□ 0.59
KLHDC4-222	ENST00000568444	RNMT	O43148	476 aa	Known RBP	18.71	■□□□□ 0.59
KLHDC4-222	ENST00000568444	NKX1-1	Q15270	411 aa	Predicted RBP	18.71	■□□□□ 0.59
KLHDC4-222	ENST00000568444	NGEF	Q8N5V2	710 aa		18.71	■□□□□ 0.59
KLHDC4-222	ENST00000568444	LGR6	Q9HBX8	967 aa		18.71	■□□□□ 0.59
KLHDC4-222	ENST00000568444	THUMPD2	Q9BTF0	503 aa	Known RBP	18.7	■□□□□ 0.58
KLHDC4-222	ENST00000568444	TEF	Q10587	303 aa		18.69	■□□□□ 0.58
KLHDC4-222	ENST00000568444	CCDC27	Q2M243	656 aa		18.69	■□□□□ 0.58
KLHDC4-222	ENST00000568444	IL17RE	Q8NFR9	667 aa		18.69	■□□□□ 0.58
KLHDC4-222	ENST00000568444	SYTL4	Q96C24	671 aa	Predicted RBP	18.69	■□□□□ 0.58
KLHDC4-222	ENST00000568444	ACSBG1	Q96GR2	724 aa		18.69	■□□□□ 0.58
KLHDC4-222	ENST00000568444	NCBP3	Q53F19	620 aa	Known RBP	18.68	■□□□□ 0.58
KLHDC4-222	ENST00000568444	WWC1	Q8IX03	1113 aa		18.68	■□□□□ 0.58
KLHDC4-222	ENST00000568444	CEMIP	Q8WUJ3	1361 aa		18.68	■□□□□ 0.58
KLHDC4-222	ENST00000568444	CABP4	P57796	275 aa		18.67	■□□□□ 0.58
KLHDC4-222	ENST00000568444	FAM196A	Q6ZSG2	479 aa		18.67	■□□□□ 0.58
KLHDC4-222	ENST00000568444	MRC1	P22897	1456 aa		18.66	■□□□□ 0.58
KLHDC4-222	ENST00000568444	ERVV-2	B6SEH9	535 aa		18.66	■□□□□ 0.58
KLHDC4-222	ENST00000568444	CALD1	Q05682	793 aa	Known RBP	18.66	■□□□□ 0.58
KLHDC4-222	ENST00000568444	TMOD3	Q9NYL9	352 aa		18.66	■□□□□ 0.58
KLHDC4-222	ENST00000568444	NHS	Q6T4R5	1651 aa		18.66	■□□□□ 0.58
KLHDC4-222	ENST00000568444	BCL9	O00512	1426 aa		18.66	■□□□□ 0.58
KLHDC4-222	ENST00000568444	ITGB4	P16144	1822 aa		18.65	■□□□□ 0.58
KLHDC4-222	ENST00000568444	SLC52A2	Q9HAB3	445 aa		18.65	■□□□□ 0.58
KLHDC4-222	ENST00000568444	LAS1L	Q9Y4W2	734 aa	Known RBP	18.65	■□□□□ 0.58
KLHDC4-222	ENST00000568444	SIPA1L3	O60292	1781 aa	Predicted RBP	18.64	■□□□□ 0.57
KLHDC4-222	ENST00000568444	PRIM1	P49642	420 aa	Known RBP	18.64	■□□□□ 0.57
KLHDC4-222	ENST00000568444	NFATC2IP	Q8NCF5	419 aa		18.64	■□□□□ 0.57
KLHDC4-222	ENST00000568444	SBF2	Q86WG5	1849 aa		18.64	■□□□□ 0.57

Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms