RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 PIBF1Q8WXW3 757 aa13.03□□□□□ -0.32
PALB2-206ENST00000568219 COG3Q96JB2 828 aa13.03□□□□□ -0.32
PALB2-206ENST00000568219 MBD5Q9P267 1494 aa13.03□□□□□ -0.32
PALB2-206ENST00000568219 SULT6B1Q6IMI4 303 aa13.03□□□□□ -0.32
PALB2-206ENST00000568219 GTPBP4Q9BZE4 634 aaKnown RBP13.03□□□□□ -0.32
PALB2-206ENST00000568219 NUP62CLQ9H1M0 184 aa13.03□□□□□ -0.32
PALB2-206ENST00000568219 SPG7Q9UQ90 795 aa13.03□□□□□ -0.32
PALB2-206ENST00000568219 EMILIN1Q9Y6C2 1016 aa13.03□□□□□ -0.32
PALB2-206ENST00000568219 TPM3P06753 285 aa13.02□□□□□ -0.32
PALB2-206ENST00000568219 CASTP20810 708 aaKnown RBP13.02□□□□□ -0.32
PALB2-206ENST00000568219 SF3A1Q15459 793 aaKnown RBP13.02□□□□□ -0.32
PALB2-206ENST00000568219 ZFP91Q96JP5 570 aaPredicted RBP13.02□□□□□ -0.32
PALB2-206ENST00000568219 KIF2CQ99661 725 aa13.02□□□□□ -0.32
PALB2-206ENST00000568219 MAGI1Q96QZ7 1491 aaPredicted RBP13.02□□□□□ -0.33
PALB2-206ENST00000568219 POLR3GO15318 223 aaPredicted RBP13.02□□□□□ -0.33
PALB2-206ENST00000568219 CPA1P15085 419 aa13.02□□□□□ -0.33
PALB2-206ENST00000568219 MRPL50Q8N5N7 158 aaKnown RBP13.02□□□□□ -0.33
PALB2-206ENST00000568219 ESF1Q9H501 851 aaKnown RBP13.02□□□□□ -0.33
PALB2-206ENST00000568219 DNMT1P26358 1616 aaKnown RBP13.02□□□□□ -0.33
PALB2-206ENST00000568219 PPFIA3O75145 1194 aa13.02□□□□□ -0.33
PALB2-206ENST00000568219 GNAI2P04899 355 aa13.02□□□□□ -0.33
PALB2-206ENST00000568219 FAM135AQ9P2D6 1515 aa13.01□□□□□ -0.33
PALB2-206ENST00000568219 DNM1Q05193 864 aaKnown RBP13.01□□□□□ -0.33
PALB2-206ENST00000568219 DMTNQ08495 405 aa13.01□□□□□ -0.33
PALB2-206ENST00000568219 JAKMIP1Q96N16 626 aaKnown RBP13.01□□□□□ -0.33
PALB2-206ENST00000568219 STX6O43752 255 aa13.01□□□□□ -0.33
PALB2-206ENST00000568219 MX1P20591 662 aa13.01□□□□□ -0.33
PALB2-206ENST00000568219 ERCC6Q03468 1493 aa13.01□□□□□ -0.33
PALB2-206ENST00000568219 MAP3K11Q16584 847 aa13.01□□□□□ -0.33
PALB2-206ENST00000568219 ATP2B3Q16720 1220 aa13.01□□□□□ -0.33
PALB2-206ENST00000568219 CCDC141Q6ZP82 1450 aa13□□□□□ -0.33
PALB2-206ENST00000568219 KDM4AO75164 1064 aa13□□□□□ -0.33
PALB2-206ENST00000568219 FAM173BQ6P4H8 233 aa13□□□□□ -0.33
PALB2-206ENST00000568219 LUZP1Q86V48 1076 aa13□□□□□ -0.33
PALB2-206ENST00000568219 DCTPP1Q9H773 170 aa13□□□□□ -0.33
PALB2-206ENST00000568219 GTF2F1P35269 517 aaKnown RBP eCLIP13□□□□□ -0.33
PALB2-206ENST00000568219 KRT85P78386 507 aa13□□□□□ -0.33
PALB2-206ENST00000568219 NECAB1Q8N987 351 aa13□□□□□ -0.33
PALB2-206ENST00000568219 MNS1Q8NEH6 495 aa13□□□□□ -0.33
PALB2-206ENST00000568219 TCEANC2Q96MN5 208 aa13□□□□□ -0.33
PALB2-206ENST00000568219 CTTNBP2Q8WZ74 1663 aa13□□□□□ -0.33
PALB2-206ENST00000568219 PDE1AP54750 535 aa12.99□□□□□ -0.33
PALB2-206ENST00000568219 SDF4Q9BRK5 362 aa12.99□□□□□ -0.33
PALB2-206ENST00000568219 UBTFL1P0CB47 393 aaPredicted RBP12.99□□□□□ -0.33
PALB2-206ENST00000568219 PTPN14Q15678 1187 aa12.99□□□□□ -0.33
PALB2-206ENST00000568219 CLIP2Q9UDT6 1046 aa12.99□□□□□ -0.33
PALB2-206ENST00000568219 ABCA5Q8WWZ7 1642 aa12.99□□□□□ -0.33
PALB2-206ENST00000568219 UBE2HP62256 183 aa12.99□□□□□ -0.33
PALB2-206ENST00000568219 FYB1O15117 783 aa12.98□□□□□ -0.33
PALB2-206ENST00000568219 TEX35Q5T0J7 233 aa12.98□□□□□ -0.33
PALB2-206ENST00000568219 SPATA32Q96LK8 384 aa12.98□□□□□ -0.33
PALB2-206ENST00000568219 SRCIN1Q9C0H9 1055 aa12.98□□□□□ -0.33
PALB2-206ENST00000568219 PRDM4Q9UKN5 801 aa12.98□□□□□ -0.33
PALB2-206ENST00000568219 WDR7Q9Y4E6 1490 aa12.98□□□□□ -0.33
PALB2-206ENST00000568219 KIF20AO95235 890 aa12.98□□□□□ -0.33
PALB2-206ENST00000568219 SMC2O95347 1197 aa12.98□□□□□ -0.33
PALB2-206ENST00000568219 ZBTB22O15209 634 aa12.98□□□□□ -0.33
PALB2-206ENST00000568219 UVSSAQ2YD98 709 aa12.98□□□□□ -0.33
PALB2-206ENST00000568219 SIRT2Q8IXJ6 389 aa12.98□□□□□ -0.33
PALB2-206ENST00000568219 SYTL4Q96C24 671 aaPredicted RBP12.98□□□□□ -0.33
PALB2-206ENST00000568219 CDK19Q9BWU1 502 aa12.98□□□□□ -0.33
PALB2-206ENST00000568219 PYCARDQ9ULZ3 195 aa12.98□□□□□ -0.33
PALB2-206ENST00000568219 ABCC11Q96J66 1382 aa12.98□□□□□ -0.33
PALB2-206ENST00000568219 LRMPQ12912 555 aa12.97□□□□□ -0.33
PALB2-206ENST00000568219 CREBRFQ8IUR6 639 aa12.97□□□□□ -0.33
PALB2-206ENST00000568219 DDX11Q96FC9 970 aa12.97□□□□□ -0.33
PALB2-206ENST00000568219 PALD1Q9ULE6 856 aa12.97□□□□□ -0.33
PALB2-206ENST00000568219 IFIT2P09913 472 aaKnown RBP12.97□□□□□ -0.33
PALB2-206ENST00000568219 GJB2P29033 226 aa12.97□□□□□ -0.33
PALB2-206ENST00000568219 PRPF40BQ6NWY9 871 aaKnown RBP12.97□□□□□ -0.33
PALB2-206ENST00000568219 PDRG1Q9NUG6 133 aa12.97□□□□□ -0.33
PALB2-206ENST00000568219 RUFY2Q8WXA3 655 aa12.97□□□□□ -0.33
PALB2-206ENST00000568219 ESYT1Q9BSJ8 1104 aa12.97□□□□□ -0.33
PALB2-206ENST00000568219 ZSCAN22P10073 491 aaPredicted RBP12.96□□□□□ -0.33
PALB2-206ENST00000568219 ZNF165P49910 485 aa12.96□□□□□ -0.33
PALB2-206ENST00000568219 ANKRD44Q8N8A2 993 aa12.96□□□□□ -0.33
PALB2-206ENST00000568219 CYP46A1Q9Y6A2 500 aa12.96□□□□□ -0.33
PALB2-206ENST00000568219 PDLIM2Q96JY6 352 aa12.96□□□□□ -0.33
PALB2-206ENST00000568219 NAA30Q147X3 362 aaPredicted RBP12.96□□□□□ -0.33
PALB2-206ENST00000568219 WDR62O43379 1518 aa12.96□□□□□ -0.34
PALB2-206ENST00000568219 AMPHP49418 695 aa12.96□□□□□ -0.34
PALB2-206ENST00000568219 CNTROBQ8N137 903 aa12.96□□□□□ -0.34
PALB2-206ENST00000568219 LIMCH1Q9UPQ0 1083 aa12.96□□□□□ -0.34
PALB2-206ENST00000568219 ZDHHC9Q9Y397 364 aa12.96□□□□□ -0.34
PALB2-206ENST00000568219 SYT1P21579 422 aa12.95□□□□□ -0.34
PALB2-206ENST00000568219 ANO6Q4KMQ2 910 aa12.95□□□□□ -0.34
PALB2-206ENST00000568219 CEP135Q66GS9 1140 aa12.95□□□□□ -0.34
PALB2-206ENST00000568219 CEP85Q6P2H3 762 aa12.95□□□□□ -0.34
PALB2-206ENST00000568219 CCDC73Q6ZRK6 1079 aa12.95□□□□□ -0.34
PALB2-206ENST00000568219 GPATCH3Q96I76 525 aa12.95□□□□□ -0.34
PALB2-206ENST00000568219 TMX1Q9H3N1 280 aa12.95□□□□□ -0.34
PALB2-206ENST00000568219 DACT1Q9NYF0 836 aa12.95□□□□□ -0.34
PALB2-206ENST00000568219 BRD1O95696 1058 aa12.95□□□□□ -0.34
PALB2-206ENST00000568219 GNAI3P08754 354 aa12.95□□□□□ -0.34
PALB2-206ENST00000568219 LMOD2Q6P5Q4 547 aa12.94□□□□□ -0.34
PALB2-206ENST00000568219 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.94□□□□□ -0.34
PALB2-206ENST00000568219 SRGAP3O43295 1099 aa12.94□□□□□ -0.34
PALB2-206ENST00000568219 DNAJC25Q9H1X3 360 aa12.94□□□□□ -0.34
PALB2-206ENST00000568219 C9orf78Q9NZ63 289 aaPredicted RBP12.94□□□□□ -0.34
PALB2-206ENST00000568219 TPM4P67936 248 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms