RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 CDCA7Q9BWT1 371 aaPredicted RBP22.59■■□□□ 1.21
CLN6-208ENST00000567060 CARD10Q9BWT7 1032 aa22.59■■□□□ 1.21
CLN6-208ENST00000567060 FAM208AQ9UK61 1670 aaKnown RBP22.58■■□□□ 1.21
CLN6-208ENST00000567060 ERBB3P21860 1342 aa22.57■■□□□ 1.2
CLN6-208ENST00000567060 TNNT2P45379 298 aaPredicted RBP22.57■■□□□ 1.2
CLN6-208ENST00000567060 SLC15A2Q16348 729 aa22.57■■□□□ 1.2
CLN6-208ENST00000567060 EMILIN1Q9Y6C2 1016 aa22.56■■□□□ 1.2
CLN6-208ENST00000567060 RGPD5Q99666 1765 aa22.55■■□□□ 1.2
CLN6-208ENST00000567060 EXOC5O00471 708 aa22.55■■□□□ 1.2
CLN6-208ENST00000567060 FBLN1P23142 703 aa22.55■■□□□ 1.2
CLN6-208ENST00000567060 ZNF784Q8NCA9 323 aaPredicted RBP22.54■■□□□ 1.2
CLN6-208ENST00000567060 SGIP1Q9BQI5 828 aa22.54■■□□□ 1.2
CLN6-208ENST00000567060 SYT17Q9BSW7 474 aa22.54■■□□□ 1.2
CLN6-208ENST00000567060 STK32BQ9NY57 414 aa22.54■■□□□ 1.2
CLN6-208ENST00000567060 WNK3Q9BYP7 1800 aa22.54■■□□□ 1.2
CLN6-208ENST00000567060 FHDC1Q9C0D6 1143 aaPredicted RBP22.53■■□□□ 1.2
CLN6-208ENST00000567060 PPM1GO15355 546 aaPredicted RBP22.52■■□□□ 1.2
CLN6-208ENST00000567060 CSB-PGBD3P0DP91 1061 aa22.52■■□□□ 1.2
CLN6-208ENST00000567060 PPP2R1AP30153 589 aa22.52■■□□□ 1.2
CLN6-208ENST00000567060 MTHFSP49914 203 aa22.52■■□□□ 1.2
CLN6-208ENST00000567060 ANKRD24Q8TF21 1146 aa22.52■■□□□ 1.2
CLN6-208ENST00000567060 PRKRIP1Q9H875 184 aaPredicted RBP22.52■■□□□ 1.2
CLN6-208ENST00000567060 HSP90AB2PQ58FF8 381 aa22.51■■□□□ 1.19
CLN6-208ENST00000567060 CFAP53Q96M91 514 aa22.5■■□□□ 1.19
CLN6-208ENST00000567060 MTFR1LQ9H019 292 aa22.5■■□□□ 1.19
CLN6-208ENST00000567060 MYBBP1AQ9BQG0 1328 aaKnown RBP22.5■■□□□ 1.19
CLN6-208ENST00000567060 ANP32CO43423 234 aa22.48■■□□□ 1.19
CLN6-208ENST00000567060 GOLGB1Q14789 3259 aaKnown RBP22.48■■□□□ 1.19
CLN6-208ENST00000567060 CNGB1Q14028 1251 aaPredicted RBP22.47■■□□□ 1.19
CLN6-208ENST00000567060 ACSBG1Q96GR2 724 aa22.46■■□□□ 1.19
CLN6-208ENST00000567060 PLEKHG2Q9H7P9 1386 aa22.46■■□□□ 1.19
CLN6-208ENST00000567060 NCAPD2Q15021 1401 aa22.44■■□□□ 1.18
CLN6-208ENST00000567060 TNS2Q63HR2 1409 aa22.44■■□□□ 1.18
CLN6-208ENST00000567060 NLRP2Q9NX02 1062 aa22.44■■□□□ 1.18
CLN6-208ENST00000567060 DIAPH1O60610 1272 aaKnown RBP22.43■■□□□ 1.18
CLN6-208ENST00000567060 EIF4A2Q14240 407 aaKnown RBP22.43■■□□□ 1.18
CLN6-208ENST00000567060 LTV1Q96GA3 475 aaPredicted RBP22.43■■□□□ 1.18
CLN6-208ENST00000567060 ARXQ96QS3 562 aa22.43■■□□□ 1.18
CLN6-208ENST00000567060 COL3A1P02461 1466 aaPredicted RBP22.42■■□□□ 1.18
CLN6-208ENST00000567060 IL13P35225 146 aa22.41■■□□□ 1.18
CLN6-208ENST00000567060 LRRC4BQ9NT99 713 aa22.41■■□□□ 1.18
CLN6-208ENST00000567060 NUDCQ9Y266 331 aa22.41■■□□□ 1.18
CLN6-208ENST00000567060 NHSQ6T4R5 1651 aa22.4■■□□□ 1.18
CLN6-208ENST00000567060 IGSF1Q8N6C5 1336 aa22.4■■□□□ 1.18
CLN6-208ENST00000567060 ZNF827Q17R98 1081 aa22.4■■□□□ 1.18
CLN6-208ENST00000567060 NBPF6Q5VWK0 638 aa22.39■■□□□ 1.17
CLN6-208ENST00000567060 NBPF4Q96M43 638 aa22.39■■□□□ 1.17
CLN6-208ENST00000567060 PAPPAQ13219 1627 aa22.39■■□□□ 1.17
CLN6-208ENST00000567060 IL2RBP14784 551 aa22.38■■□□□ 1.17
CLN6-208ENST00000567060 EYA1Q99502 592 aa22.38■■□□□ 1.17
CLN6-208ENST00000567060 MAP3K5Q99683 1374 aa22.38■■□□□ 1.17
CLN6-208ENST00000567060 RGPD2P0DJD1 1756 aa22.37■■□□□ 1.17
CLN6-208ENST00000567060 CHD4Q14839 1912 aa22.36■■□□□ 1.17
CLN6-208ENST00000567060 C1QTNF8P60827 252 aa22.36■■□□□ 1.17
CLN6-208ENST00000567060 KDRP35968 1356 aa22.36■■□□□ 1.17
CLN6-208ENST00000567060 AKT1S1Q96B36 256 aa22.35■■□□□ 1.17
CLN6-208ENST00000567060 RAPGEF4Q8WZA2 1011 aa22.34■■□□□ 1.17
CLN6-208ENST00000567060 BTAF1O14981 1849 aa22.34■■□□□ 1.17
CLN6-208ENST00000567060 DIEXFQ68CQ4 756 aaKnown RBP22.33■■□□□ 1.17
CLN6-208ENST00000567060 SENP3-EIF4A1A0A087X0R7 540 aa22.32■■□□□ 1.16
CLN6-208ENST00000567060 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.32■■□□□ 1.16
CLN6-208ENST00000567060 KAT6BQ8WYB5 2073 aa22.31■■□□□ 1.16
CLN6-208ENST00000567060 TATP17735 454 aaPredicted RBP22.31■■□□□ 1.16
CLN6-208ENST00000567060 CEP350Q5VT06 3117 aa22.3■■□□□ 1.16
CLN6-208ENST00000567060 GPR162Q16538 588 aa22.3■■□□□ 1.16
CLN6-208ENST00000567060 SLC16A10Q8TF71 515 aa22.29■■□□□ 1.16
CLN6-208ENST00000567060 KCNQ4P56696 695 aa22.28■■□□□ 1.16
CLN6-208ENST00000567060 SLC27A3Q5K4L6 730 aa22.28■■□□□ 1.16
CLN6-208ENST00000567060 SULT6B1Q6IMI4 303 aa22.28■■□□□ 1.16
CLN6-208ENST00000567060 PNNQ9H307 717 aaKnown RBP22.28■■□□□ 1.16
CLN6-208ENST00000567060 PNPLA7Q6ZV29 1317 aa22.28■■□□□ 1.16
CLN6-208ENST00000567060 MEGF6O75095 1541 aa22.27■■□□□ 1.16
CLN6-208ENST00000567060 U2SURPO15042 1029 aaKnown RBP22.27■■□□□ 1.16
CLN6-208ENST00000567060 FCHSD2O94868 740 aa22.27■■□□□ 1.16
CLN6-208ENST00000567060 USHBP1Q8N6Y0 703 aa22.27■■□□□ 1.16
CLN6-208ENST00000567060 DDX54Q8TDD1 881 aaKnown RBP22.27■■□□□ 1.16
CLN6-208ENST00000567060 AMOTQ4VCS5 1084 aa22.26■■□□□ 1.15
CLN6-208ENST00000567060 PKD1L3Q7Z443 1732 aa22.26■■□□□ 1.15
CLN6-208ENST00000567060 U2AF1L5P0DN76 240 aaPredicted RBP22.25■■□□□ 1.15
CLN6-208ENST00000567060 U2AF1Q01081 240 aaKnown RBP eCLIP22.25■■□□□ 1.15
CLN6-208ENST00000567060 ZCRB1Q8TBF4 217 aaKnown RBP22.25■■□□□ 1.15
CLN6-208ENST00000567060 SPG7Q9UQ90 795 aa22.25■■□□□ 1.15
CLN6-208ENST00000567060 COL24A1Q17RW2 1714 aa22.23■■□□□ 1.15
CLN6-208ENST00000567060 CCER2I3L3R5 266 aa22.23■■□□□ 1.15
CLN6-208ENST00000567060 PRIM1P49642 420 aaKnown RBP22.23■■□□□ 1.15
CLN6-208ENST00000567060 WDR43Q15061 677 aaKnown RBP eCLIP22.23■■□□□ 1.15
CLN6-208ENST00000567060 PLEKHO1Q53GL0 409 aaPredicted RBP22.23■■□□□ 1.15
CLN6-208ENST00000567060 NLGN2Q8NFZ4 835 aa22.23■■□□□ 1.15
CLN6-208ENST00000567060 PCDH11XQ9BZA7 1347 aa22.23■■□□□ 1.15
CLN6-208ENST00000567060 PCDH11YQ9BZA8 1340 aa22.23■■□□□ 1.15
CLN6-208ENST00000567060 POLD1P28340 1107 aa22.22■■□□□ 1.15
CLN6-208ENST00000567060 AEBP1Q8IUX7 1158 aa22.22■■□□□ 1.15
CLN6-208ENST00000567060 KLHL34Q8N239 644 aa22.22■■□□□ 1.15
CLN6-208ENST00000567060 TFCP2L1Q9NZI6 479 aa22.22■■□□□ 1.15
CLN6-208ENST00000567060 RSPH6AQ9H0K4 717 aa22.21■■□□□ 1.15
CLN6-208ENST00000567060 QSER1Q2KHR3 1735 aa22.2■■□□□ 1.14
CLN6-208ENST00000567060 NEFMP07197 916 aa22.2■■□□□ 1.14
CLN6-208ENST00000567060 HMOX1P09601 288 aa22.2■■□□□ 1.14
CLN6-208ENST00000567060 MRS2Q9HD23 443 aa22.2■■□□□ 1.14
CLN6-208ENST00000567060 PELP1Q8IZL8 1130 aaKnown RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms