RNA–Protein interactions for RNA: ENST00000566613.1

GDPD3-205, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 5

Gene GDPD3, Length 235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-205ENST00000566613 OGFRQ9NZT2 677 aa6.93□□□□□ -1.3
GDPD3-205ENST00000566613 HDAC5Q9UQL6 1122 aa6.93□□□□□ -1.3
GDPD3-205ENST00000566613 SYNMO15061 1565 aa6.93□□□□□ -1.3
GDPD3-205ENST00000566613 SCAF11Q99590 1463 aaKnown RBP6.92□□□□□ -1.3
GDPD3-205ENST00000566613 CFAP74Q9C0B2 1584 aa6.92□□□□□ -1.3
GDPD3-205ENST00000566613 ATP2B3Q16720 1220 aa6.92□□□□□ -1.3
GDPD3-205ENST00000566613 TSR1Q2NL82 804 aaKnown RBP6.92□□□□□ -1.3
GDPD3-205ENST00000566613 SKAP1Q86WV1 359 aa6.92□□□□□ -1.3
GDPD3-205ENST00000566613 CNPY4Q8N129 248 aa6.92□□□□□ -1.3
GDPD3-205ENST00000566613 SNX21Q969T3 373 aa6.92□□□□□ -1.3
GDPD3-205ENST00000566613 PANK3Q9H999 370 aa6.92□□□□□ -1.3
GDPD3-205ENST00000566613 PRM3Q9NNZ6 103 aa6.92□□□□□ -1.3
GDPD3-205ENST00000566613 ZNF330Q9Y3S2 320 aaPredicted RBP6.92□□□□□ -1.3
GDPD3-205ENST00000566613 RAD50Q92878 1312 aa6.92□□□□□ -1.3
GDPD3-205ENST00000566613 ANKRD30BQ9BXX2 1392 aa6.92□□□□□ -1.3
GDPD3-205ENST00000566613 DNMT1P26358 1616 aaKnown RBP6.91□□□□□ -1.3
GDPD3-205ENST00000566613 KDM4FA0A1W2PPD8 638 aa6.91□□□□□ -1.3
GDPD3-205ENST00000566613 FAM205CA6NFA0 338 aa6.91□□□□□ -1.3
GDPD3-205ENST00000566613 PATL2C9JE40 543 aaKnown RBP6.91□□□□□ -1.3
GDPD3-205ENST00000566613 KCNJ4P48050 445 aa6.91□□□□□ -1.3
GDPD3-205ENST00000566613 DOK7Q18PE1 504 aa6.91□□□□□ -1.3
GDPD3-205ENST00000566613 CC2D1BQ5T0F9 858 aaKnown RBP6.91□□□□□ -1.3
GDPD3-205ENST00000566613 BRMS1Q9HCU9 246 aa6.91□□□□□ -1.3
GDPD3-205ENST00000566613 PLEKHH1Q9ULM0 1364 aa6.91□□□□□ -1.3
GDPD3-205ENST00000566613 NKTRP30414 1462 aaKnown RBP6.91□□□□□ -1.3
GDPD3-205ENST00000566613 CC2D2AQ9P2K1 1620 aa6.9□□□□□ -1.3
GDPD3-205ENST00000566613 CUL7Q14999 1698 aa6.9□□□□□ -1.3
GDPD3-205ENST00000566613 RIMBP2O15034 1052 aa6.9□□□□□ -1.3
GDPD3-205ENST00000566613 PADI6Q6TGC4 694 aa6.9□□□□□ -1.3
GDPD3-205ENST00000566613 PIBF1Q8WXW3 757 aa6.9□□□□□ -1.3
GDPD3-205ENST00000566613 RBM33Q96EV2 1170 aaKnown RBP6.9□□□□□ -1.3
GDPD3-205ENST00000566613 SNRKQ9NRH2 765 aa6.9□□□□□ -1.3
GDPD3-205ENST00000566613 DIAPH3Q9NSV4 1193 aa6.9□□□□□ -1.3
GDPD3-205ENST00000566613 ATP1B4Q9UN42 357 aaPredicted RBP6.9□□□□□ -1.3
GDPD3-205ENST00000566613 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.89□□□□□ -1.31
GDPD3-205ENST00000566613 TRIM6-TRIM34B2RNG4 842 aa6.89□□□□□ -1.31
GDPD3-205ENST00000566613 HOXB3P14651 431 aaPredicted RBP6.89□□□□□ -1.31
GDPD3-205ENST00000566613 FKBP5Q13451 457 aaPredicted RBP6.89□□□□□ -1.31
GDPD3-205ENST00000566613 RETREG2Q8NC44 543 aa6.89□□□□□ -1.31
GDPD3-205ENST00000566613 MTMR14Q8NCE2 650 aa6.89□□□□□ -1.31
GDPD3-205ENST00000566613 RBM46Q8TBY0 533 aaKnown RBP6.89□□□□□ -1.31
GDPD3-205ENST00000566613 TNPO1Q92973 898 aaKnown RBP6.89□□□□□ -1.31
GDPD3-205ENST00000566613 HS3ST6Q96QI5 342 aa6.89□□□□□ -1.31
GDPD3-205ENST00000566613 TRIM34Q9BYJ4 488 aa6.89□□□□□ -1.31
GDPD3-205ENST00000566613 BCL2L12Q9HB09 334 aa6.89□□□□□ -1.31
GDPD3-205ENST00000566613 SPTLC3Q9NUV7 552 aa6.89□□□□□ -1.31
GDPD3-205ENST00000566613 TRPM1Q7Z4N2 1603 aa6.89□□□□□ -1.31
GDPD3-205ENST00000566613 CROCC2H7BZ55 1655 aa6.89□□□□□ -1.31
GDPD3-205ENST00000566613 COL17A1Q9UMD9 1497 aaPredicted RBP6.88□□□□□ -1.31
GDPD3-205ENST00000566613 ROCK1Q13464 1354 aa6.88□□□□□ -1.31
GDPD3-205ENST00000566613 SPTLC1O15269 473 aa6.88□□□□□ -1.31
GDPD3-205ENST00000566613 CTIFO43310 598 aaKnown RBP6.88□□□□□ -1.31
GDPD3-205ENST00000566613 PLIN1O60240 522 aa6.88□□□□□ -1.31
GDPD3-205ENST00000566613 APPP05067 770 aa6.88□□□□□ -1.31
GDPD3-205ENST00000566613 MCCP23508 829 aa6.88□□□□□ -1.31
GDPD3-205ENST00000566613 FOSBP53539 338 aa6.88□□□□□ -1.31
GDPD3-205ENST00000566613 CHAF1AQ13111 956 aaPredicted RBP6.88□□□□□ -1.31
GDPD3-205ENST00000566613 C6orf132Q5T0Z8 1188 aa6.88□□□□□ -1.31
GDPD3-205ENST00000566613 RIC3Q7Z5B4 369 aa6.88□□□□□ -1.31
GDPD3-205ENST00000566613 PMFBP1Q8TBY8 1022 aa6.88□□□□□ -1.31
GDPD3-205ENST00000566613 L3MBTL2Q969R5 705 aa6.88□□□□□ -1.31
GDPD3-205ENST00000566613 MYCBPQ99417 103 aaPredicted RBP6.88□□□□□ -1.31
GDPD3-205ENST00000566613 PCDHGA4Q9Y5G9 962 aa6.88□□□□□ -1.31
GDPD3-205ENST00000566613 KDM5DQ9BY66 1539 aa6.87□□□□□ -1.31
GDPD3-205ENST00000566613 SLFN14P0C7P3 912 aa6.87□□□□□ -1.31
GDPD3-205ENST00000566613 CAPN2P17655 700 aa6.87□□□□□ -1.31
GDPD3-205ENST00000566613 NBPF20Q3BBV1 942 aa6.87□□□□□ -1.31
GDPD3-205ENST00000566613 SPNS2Q8IVW8 549 aa6.87□□□□□ -1.31
GDPD3-205ENST00000566613 SULF1Q8IWU6 871 aa6.87□□□□□ -1.31
GDPD3-205ENST00000566613 NCAPGQ9BPX3 1015 aa6.87□□□□□ -1.31
GDPD3-205ENST00000566613 SLC52A1Q9NWF4 448 aa6.87□□□□□ -1.31
GDPD3-205ENST00000566613 LIMD1Q9UGP4 676 aa6.87□□□□□ -1.31
GDPD3-205ENST00000566613 AK9Q5TCS8 1911 aa6.87□□□□□ -1.31
GDPD3-205ENST00000566613 CLTCL1P53675 1640 aa6.87□□□□□ -1.31
GDPD3-205ENST00000566613 EIF2AK4Q9P2K8 1649 aaKnown RBP6.87□□□□□ -1.31
GDPD3-205ENST00000566613 GRIN2AQ12879 1464 aa6.86□□□□□ -1.31
GDPD3-205ENST00000566613 ZNF521Q96K83 1311 aa6.86□□□□□ -1.31
GDPD3-205ENST00000566613 HOXB1P14653 301 aaPredicted RBP6.86□□□□□ -1.31
GDPD3-205ENST00000566613 PDE3AQ14432 1141 aa6.86□□□□□ -1.31
GDPD3-205ENST00000566613 MUM1L1Q5H9M0 696 aa6.86□□□□□ -1.31
GDPD3-205ENST00000566613 C20orf194Q5TEA3 1177 aa6.86□□□□□ -1.31
GDPD3-205ENST00000566613 SPIRE2Q8WWL2 714 aa6.86□□□□□ -1.31
GDPD3-205ENST00000566613 C22orf23Q9BZE7 217 aa6.86□□□□□ -1.31
GDPD3-205ENST00000566613 NESP48681 1621 aa6.86□□□□□ -1.31
GDPD3-205ENST00000566613 RNF17Q9BXT8 1623 aaKnown RBP6.86□□□□□ -1.31
GDPD3-205ENST00000566613 GRIN2BQ13224 1484 aa6.85□□□□□ -1.31
GDPD3-205ENST00000566613 ATAD2Q6PL18 1390 aa6.85□□□□□ -1.31
GDPD3-205ENST00000566613 ERBB3P21860 1342 aa6.85□□□□□ -1.31
GDPD3-205ENST00000566613 E9PSI1 815 aa6.85□□□□□ -1.31
GDPD3-205ENST00000566613 CD46P15529 392 aa6.85□□□□□ -1.31
GDPD3-205ENST00000566613 PRSS12P56730 875 aa6.85□□□□□ -1.31
GDPD3-205ENST00000566613 MMRN1Q13201 1228 aa6.85□□□□□ -1.31
GDPD3-205ENST00000566613 TERF2Q15554 542 aa6.85□□□□□ -1.31
GDPD3-205ENST00000566613 NBPF8Q3BBV2 869 aa6.85□□□□□ -1.31
GDPD3-205ENST00000566613 ZSCAN23Q3MJ62 389 aa6.85□□□□□ -1.31
GDPD3-205ENST00000566613 DUSP27Q5VZP5 1158 aa6.85□□□□□ -1.31
GDPD3-205ENST00000566613 RSBN1LQ6PCB5 846 aaPredicted RBP6.85□□□□□ -1.31
GDPD3-205ENST00000566613 AEBP1Q8IUX7 1158 aa6.85□□□□□ -1.31
GDPD3-205ENST00000566613 KRT222Q8N1A0 295 aa6.85□□□□□ -1.31
GDPD3-205ENST00000566613 ZDHHC16Q969W1 377 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms