RNA–Protein interactions for RNA: ENST00000566613.1

GDPD3-205, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 5

Gene GDPD3, Length 235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-205ENST00000566613 AEBP2Q6ZN18 517 aaPredicted RBP15.37■□□□□ 0.05
GDPD3-205ENST00000566613 CHIC1Q5VXU3 224 aa14.63□□□□□ -0.07
GDPD3-205ENST00000566613 SENP3Q9H4L4 574 aaPredicted RBP13.19□□□□□ -0.3
GDPD3-205ENST00000566613 PHF23Q9BUL5 403 aaPredicted RBP12.99□□□□□ -0.33
GDPD3-205ENST00000566613 FOXD1Q16676 465 aa12.24□□□□□ -0.45
GDPD3-205ENST00000566613 PLPPR3Q6T4P5 718 aa11.86□□□□□ -0.51
GDPD3-205ENST00000566613 MSH5O43196 834 aa11.52□□□□□ -0.57
GDPD3-205ENST00000566613 PIAS4Q8N2W9 510 aaPredicted RBP11.48□□□□□ -0.57
GDPD3-205ENST00000566613 PPP6R1Q9UPN7 881 aa11.42□□□□□ -0.58
GDPD3-205ENST00000566613 ADRA2BP18089 450 aa11.41□□□□□ -0.58
GDPD3-205ENST00000566613 POTEDQ86YR6 584 aa11.2□□□□□ -0.62
GDPD3-205ENST00000566613 KCNA4P22459 653 aa10.9□□□□□ -0.66
GDPD3-205ENST00000566613 EHMT2Q96KQ7 1210 aa10.82□□□□□ -0.68
GDPD3-205ENST00000566613 SCAF1Q9H7N4 1312 aaKnown RBP10.53□□□□□ -0.72
GDPD3-205ENST00000566613 SLC4A1APQ9BWU0 796 aaKnown RBP10.52□□□□□ -0.73
GDPD3-205ENST00000566613 CSRNP3Q8WYN3 585 aa10.5□□□□□ -0.73
GDPD3-205ENST00000566613 MAPK8IP2Q13387 824 aaPredicted RBP10.47□□□□□ -0.73
GDPD3-205ENST00000566613 PPP4R3CPQ6ZMV5 832 aa10.47□□□□□ -0.73
GDPD3-205ENST00000566613 NCBP3Q53F19 620 aaKnown RBP10.44□□□□□ -0.74
GDPD3-205ENST00000566613 DMRT2Q9Y5R5 561 aa10.43□□□□□ -0.74
GDPD3-205ENST00000566613 NPM3O75607 178 aaKnown RBP10.23□□□□□ -0.77
GDPD3-205ENST00000566613 CNKSR2Q8WXI2 1034 aa10.1□□□□□ -0.79
GDPD3-205ENST00000566613 DCAF8L1A6NGE4 600 aa10.07□□□□□ -0.8
GDPD3-205ENST00000566613 DNAJC5BQ9UF47 199 aa10.06□□□□□ -0.8
GDPD3-205ENST00000566613 ZBTB22O15209 634 aa10.04□□□□□ -0.8
GDPD3-205ENST00000566613 HOXD11P31277 338 aaPredicted RBP10.03□□□□□ -0.8
GDPD3-205ENST00000566613 PELP1Q8IZL8 1130 aaKnown RBP10.02□□□□□ -0.81
GDPD3-205ENST00000566613 RNF216Q9NWF9 866 aaPredicted RBP9.98□□□□□ -0.81
GDPD3-205ENST00000566613 FOXD4L1Q9NU39 408 aa9.91□□□□□ -0.82
GDPD3-205ENST00000566613 CACNB1Q02641 598 aaPredicted RBP9.9□□□□□ -0.82
GDPD3-205ENST00000566613 MYT1Q01538 1121 aa9.87□□□□□ -0.83
GDPD3-205ENST00000566613 RNF39Q9H2S5 420 aa9.79□□□□□ -0.84
GDPD3-205ENST00000566613 SLC24A1O60721 1099 aa9.77□□□□□ -0.85
GDPD3-205ENST00000566613 AMER1Q5JTC6 1135 aaPredicted RBP9.76□□□□□ -0.85
GDPD3-205ENST00000566613 C1QBPQ07021 282 aaKnown RBP9.68□□□□□ -0.86
GDPD3-205ENST00000566613 RTN4Q9NQC3 1192 aaKnown RBP9.66□□□□□ -0.86
GDPD3-205ENST00000566613 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.63□□□□□ -0.87
GDPD3-205ENST00000566613 ATXN8OSP0DMR3 200 aa9.61□□□□□ -0.87
GDPD3-205ENST00000566613 NISCHQ9Y2I1 1504 aa9.59□□□□□ -0.87
GDPD3-205ENST00000566613 SLC4A2P04920 1241 aa9.5□□□□□ -0.89
GDPD3-205ENST00000566613 HRCP23327 699 aa9.5□□□□□ -0.89
GDPD3-205ENST00000566613 MYCNP04198 464 aaPredicted RBP9.49□□□□□ -0.89
GDPD3-205ENST00000566613 TTBK1Q5TCY1 1321 aaPredicted RBP9.48□□□□□ -0.89
GDPD3-205ENST00000566613 FKBP8Q14318 412 aa9.42□□□□□ -0.9
GDPD3-205ENST00000566613 U3KPZ7 1027 aaPredicted RBP9.36□□□□□ -0.91
GDPD3-205ENST00000566613 CAPN15O75808 1086 aa9.27□□□□□ -0.93
GDPD3-205ENST00000566613 SPINK5Q9NQ38 1064 aaPredicted RBP9.23□□□□□ -0.93
GDPD3-205ENST00000566613 APLP2Q06481 763 aa9.21□□□□□ -0.94
GDPD3-205ENST00000566613 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.18□□□□□ -0.94
GDPD3-205ENST00000566613 HNRNPUL2Q1KMD3 747 aaKnown RBP9.18□□□□□ -0.94
GDPD3-205ENST00000566613 DSG3P32926 999 aa9.16□□□□□ -0.94
GDPD3-205ENST00000566613 SAMD1Q6SPF0 538 aaPredicted RBP9.15□□□□□ -0.94
GDPD3-205ENST00000566613 CCDC180Q9P1Z9 1646 aa9.13□□□□□ -0.95
GDPD3-205ENST00000566613 TRHP20396 242 aaPredicted RBP9.12□□□□□ -0.95
GDPD3-205ENST00000566613 ZNF219Q9P2Y4 722 aaPredicted RBP9.11□□□□□ -0.95
GDPD3-205ENST00000566613 ATF5Q9Y2D1 282 aaPredicted RBP9.09□□□□□ -0.95
GDPD3-205ENST00000566613 DCAF1Q9Y4B6 1507 aa9.05□□□□□ -0.96
GDPD3-205ENST00000566613 FBXO3Q9UK99 471 aa9.04□□□□□ -0.96
GDPD3-205ENST00000566613 ABCB7O75027 752 aa9.03□□□□□ -0.96
GDPD3-205ENST00000566613 MYO15BQ96JP2 1530 aa9.01□□□□□ -0.97
GDPD3-205ENST00000566613 PPARGC1BQ86YN6 1023 aaKnown RBP8.96□□□□□ -0.98
GDPD3-205ENST00000566613 PLCB2Q00722 1185 aa8.95□□□□□ -0.98
GDPD3-205ENST00000566613 ZEB1P37275 1124 aaPredicted RBP8.93□□□□□ -0.98
GDPD3-205ENST00000566613 PROM2Q8N271 834 aa8.92□□□□□ -0.98
GDPD3-205ENST00000566613 SPDYE4A6NLX3 237 aa8.87□□□□□ -0.99
GDPD3-205ENST00000566613 PCGF6Q9BYE7 350 aa8.86□□□□□ -0.99
GDPD3-205ENST00000566613 POLA2Q14181 598 aa8.85□□□□□ -0.99
GDPD3-205ENST00000566613 VASPP50552 380 aaPredicted RBP8.84□□□□□ -0.99
GDPD3-205ENST00000566613 ACIN1Q9UKV3 1341 aaKnown RBP8.83□□□□□ -1
GDPD3-205ENST00000566613 CENPBP07199 599 aaPredicted RBP8.83□□□□□ -1
GDPD3-205ENST00000566613 ERICH6Q7L0X2 663 aa8.83□□□□□ -1
GDPD3-205ENST00000566613 PRKCSHP14314 528 aaPredicted RBP8.81□□□□□ -1
GDPD3-205ENST00000566613 RBM42Q9BTD8 480 aaKnown RBP8.81□□□□□ -1
GDPD3-205ENST00000566613 BCL11AQ9H165 835 aa8.81□□□□□ -1
GDPD3-205ENST00000566613 POTEHQ6S545 545 aa8.8□□□□□ -1
GDPD3-205ENST00000566613 MKRN4PQ13434 485 aaPredicted RBP8.76□□□□□ -1.01
GDPD3-205ENST00000566613 BCANQ96GW7 911 aa8.76□□□□□ -1.01
GDPD3-205ENST00000566613 FBLN2P98095 1184 aa8.75□□□□□ -1.01
GDPD3-205ENST00000566613 IFNLR1Q8IU57 520 aaPredicted RBP8.74□□□□□ -1.01
GDPD3-205ENST00000566613 VSIG10Q8N0Z9 540 aa8.74□□□□□ -1.01
GDPD3-205ENST00000566613 HAP1P54257 671 aaPredicted RBP8.73□□□□□ -1.01
GDPD3-205ENST00000566613 ZBTB12Q9Y330 459 aaPredicted RBP8.72□□□□□ -1.01
GDPD3-205ENST00000566613 TRIM26Q12899 539 aaPredicted RBP8.7□□□□□ -1.02
GDPD3-205ENST00000566613 PKD2Q13563 968 aa8.7□□□□□ -1.02
GDPD3-205ENST00000566613 NEUROD1Q13562 356 aa8.66□□□□□ -1.02
GDPD3-205ENST00000566613 GTF3C3Q9Y5Q9 886 aa8.66□□□□□ -1.02
GDPD3-205ENST00000566613 FAM9AQ8IZU1 332 aaPredicted RBP8.65□□□□□ -1.02
GDPD3-205ENST00000566613 DCAF8L2P0C7V8 631 aa8.64□□□□□ -1.03
GDPD3-205ENST00000566613 CLSPNQ9HAW4 1339 aa8.62□□□□□ -1.03
GDPD3-205ENST00000566613 BBXQ8WY36 941 aaPredicted RBP8.62□□□□□ -1.03
GDPD3-205ENST00000566613 TAOK2Q9UL54 1235 aa8.61□□□□□ -1.03
GDPD3-205ENST00000566613 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.6□□□□□ -1.03
GDPD3-205ENST00000566613 ANP32EQ9BTT0 268 aa8.59□□□□□ -1.03
GDPD3-205ENST00000566613 CHRDL2Q6WN34 429 aa8.58□□□□□ -1.04
GDPD3-205ENST00000566613 AKT1S1Q96B36 256 aa8.58□□□□□ -1.04
GDPD3-205ENST00000566613 SPOCK2Q92563 424 aa8.57□□□□□ -1.04
GDPD3-205ENST00000566613 OSCARQ8IYS5 282 aa8.56□□□□□ -1.04
GDPD3-205ENST00000566613 STAG3Q9UJ98 1225 aa8.52□□□□□ -1.05
GDPD3-205ENST00000566613 ECM2O94769 699 aaPredicted RBP8.5□□□□□ -1.05
GDPD3-205ENST00000566613 KDM2AQ9Y2K7 1162 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms