RNA–Protein interactions for RNA: ENST00000566557.5

SCAMP2-208, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-208ENST00000566557 IL2RBP14784 551 aa22.03■■□□□ 1.12
SCAMP2-208ENST00000566557 CFAP53Q96M91 514 aa22.02■■□□□ 1.12
SCAMP2-208ENST00000566557 CDCA7Q9BWT1 371 aaPredicted RBP22.02■■□□□ 1.12
SCAMP2-208ENST00000566557 RALBP1Q15311 655 aa22.01■■□□□ 1.11
SCAMP2-208ENST00000566557 DDB1Q16531 1140 aa22.01■■□□□ 1.11
SCAMP2-208ENST00000566557 MEGF6O75095 1541 aa22.01■■□□□ 1.11
SCAMP2-208ENST00000566557 TNS2Q63HR2 1409 aa22■■□□□ 1.11
SCAMP2-208ENST00000566557 RAPGEF4Q8WZA2 1011 aa22■■□□□ 1.11
SCAMP2-208ENST00000566557 EYA1Q99502 592 aa22■■□□□ 1.11
SCAMP2-208ENST00000566557 COL3A1P02461 1466 aaPredicted RBP22■■□□□ 1.11
SCAMP2-208ENST00000566557 DIAPH1O60610 1272 aaKnown RBP21.99■■□□□ 1.11
SCAMP2-208ENST00000566557 TATP17735 454 aaPredicted RBP21.97■■□□□ 1.11
SCAMP2-208ENST00000566557 IGSF1Q8N6C5 1336 aa21.97■■□□□ 1.11
SCAMP2-208ENST00000566557 NCAPD2Q15021 1401 aa21.97■■□□□ 1.11
SCAMP2-208ENST00000566557 EXOC5O00471 708 aa21.96■■□□□ 1.11
SCAMP2-208ENST00000566557 IL13P35225 146 aa21.96■■□□□ 1.11
SCAMP2-208ENST00000566557 MYBBP1AQ9BQG0 1328 aaKnown RBP21.96■■□□□ 1.11
SCAMP2-208ENST00000566557 OVOS2A0A0G2JMS6 1433 aa21.96■■□□□ 1.11
SCAMP2-208ENST00000566557 U2SURPO15042 1029 aaKnown RBP21.95■■□□□ 1.1
SCAMP2-208ENST00000566557 PRKRIP1Q9H875 184 aaPredicted RBP21.94■■□□□ 1.1
SCAMP2-208ENST00000566557 SHANK3Q9BYB0 1731 aa21.94■■□□□ 1.1
SCAMP2-208ENST00000566557 PKD1L3Q7Z443 1732 aa21.92■■□□□ 1.1
SCAMP2-208ENST00000566557 SULT6B1Q6IMI4 303 aa21.92■■□□□ 1.1
SCAMP2-208ENST00000566557 ANP32CO43423 234 aa21.91■■□□□ 1.1
SCAMP2-208ENST00000566557 HMOX1P09601 288 aa21.91■■□□□ 1.1
SCAMP2-208ENST00000566557 AEBP1Q8IUX7 1158 aa21.91■■□□□ 1.1
SCAMP2-208ENST00000566557 ZNF784Q8NCA9 323 aaPredicted RBP21.91■■□□□ 1.1
SCAMP2-208ENST00000566557 UTRNP46939 3433 aa21.9■■□□□ 1.1
SCAMP2-208ENST00000566557 ZCRB1Q8TBF4 217 aaKnown RBP21.9■■□□□ 1.1
SCAMP2-208ENST00000566557 DDX54Q8TDD1 881 aaKnown RBP21.9■■□□□ 1.1
SCAMP2-208ENST00000566557 NUDCQ9Y266 331 aa21.9■■□□□ 1.1
SCAMP2-208ENST00000566557 MARCH10Q8NA82 808 aaPredicted RBP21.89■■□□□ 1.09
SCAMP2-208ENST00000566557 RREB1Q92766 1687 aa21.88■■□□□ 1.09
SCAMP2-208ENST00000566557 NUP188Q5SRE5 1749 aa21.88■■□□□ 1.09
SCAMP2-208ENST00000566557 SENP3-EIF4A1A0A087X0R7 540 aa21.87■■□□□ 1.09
SCAMP2-208ENST00000566557 KDRP35968 1356 aa21.87■■□□□ 1.09
SCAMP2-208ENST00000566557 PCDH11XQ9BZA7 1347 aa21.86■■□□□ 1.09
SCAMP2-208ENST00000566557 PCDH11YQ9BZA8 1340 aa21.86■■□□□ 1.09
SCAMP2-208ENST00000566557 SPG7Q9UQ90 795 aa21.86■■□□□ 1.09
SCAMP2-208ENST00000566557 PLSCR1O15162 318 aa21.85■■□□□ 1.09
SCAMP2-208ENST00000566557 ZBTB7AO95365 584 aa21.85■■□□□ 1.09
SCAMP2-208ENST00000566557 U2AF1L5P0DN76 240 aaPredicted RBP21.85■■□□□ 1.09
SCAMP2-208ENST00000566557 U2AF1Q01081 240 aaKnown RBP eCLIP21.85■■□□□ 1.09
SCAMP2-208ENST00000566557 PDGFDQ9GZP0 370 aaPredicted RBP21.85■■□□□ 1.09
SCAMP2-208ENST00000566557 DOT1LQ8TEK3 1739 aa21.85■■□□□ 1.09
SCAMP2-208ENST00000566557 BCL11BQ9C0K0 894 aaPredicted RBP21.84■■□□□ 1.09
SCAMP2-208ENST00000566557 ANO8Q9HCE9 1232 aaPredicted RBP21.84■■□□□ 1.09
SCAMP2-208ENST00000566557 SBF2Q86WG5 1849 aa21.83■■□□□ 1.09
SCAMP2-208ENST00000566557 ATF5Q9Y2D1 282 aaPredicted RBP21.83■■□□□ 1.09
SCAMP2-208ENST00000566557 PLEKHO1Q53GL0 409 aaPredicted RBP21.82■■□□□ 1.08
SCAMP2-208ENST00000566557 ACSBG1Q96GR2 724 aa21.81■■□□□ 1.08
SCAMP2-208ENST00000566557 PLEKHG2Q9H7P9 1386 aa21.81■■□□□ 1.08
SCAMP2-208ENST00000566557 NHSQ6T4R5 1651 aa21.81■■□□□ 1.08
SCAMP2-208ENST00000566557 ZNF530Q6P9A1 599 aaPredicted RBP21.8■■□□□ 1.08
SCAMP2-208ENST00000566557 PTGER2P43116 358 aa21.79■■□□□ 1.08
SCAMP2-208ENST00000566557 C1QTNF8P60827 252 aa21.79■■□□□ 1.08
SCAMP2-208ENST00000566557 AMOTQ4VCS5 1084 aa21.79■■□□□ 1.08
SCAMP2-208ENST00000566557 PTF1AQ7RTS3 328 aa21.79■■□□□ 1.08
SCAMP2-208ENST00000566557 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.79■■□□□ 1.08
SCAMP2-208ENST00000566557 CYP27B1O15528 508 aa21.78■■□□□ 1.08
SCAMP2-208ENST00000566557 PRKAR2BP31323 418 aa21.78■■□□□ 1.08
SCAMP2-208ENST00000566557 WDR43Q15061 677 aaKnown RBP eCLIP21.78■■□□□ 1.08
SCAMP2-208ENST00000566557 PROM2Q8N271 834 aa21.78■■□□□ 1.08
SCAMP2-208ENST00000566557 SYT17Q9BSW7 474 aa21.78■■□□□ 1.08
SCAMP2-208ENST00000566557 C1orf141Q5JVX7 400 aa21.77■■□□□ 1.08
SCAMP2-208ENST00000566557 IFNL2Q8IZJ0 200 aa21.77■■□□□ 1.08
SCAMP2-208ENST00000566557 FHDC1Q9C0D6 1143 aaPredicted RBP21.77■■□□□ 1.08
SCAMP2-208ENST00000566557 RSPH6AQ9H0K4 717 aa21.77■■□□□ 1.08
SCAMP2-208ENST00000566557 BCL9O00512 1426 aa21.77■■□□□ 1.08
SCAMP2-208ENST00000566557 TOGARAM1Q9Y4F4 1720 aa21.77■■□□□ 1.08
SCAMP2-208ENST00000566557 KAT6BQ8WYB5 2073 aa21.76■■□□□ 1.07
SCAMP2-208ENST00000566557 PHKG2P15735 406 aa21.76■■□□□ 1.07
SCAMP2-208ENST00000566557 SYTL4Q96C24 671 aaPredicted RBP21.76■■□□□ 1.07
SCAMP2-208ENST00000566557 IFFO2Q5TF58 517 aa21.75■■□□□ 1.07
SCAMP2-208ENST00000566557 NEFMP07197 916 aa21.74■■□□□ 1.07
SCAMP2-208ENST00000566557 STK32BQ9NY57 414 aa21.74■■□□□ 1.07
SCAMP2-208ENST00000566557 BTAF1O14981 1849 aa21.73■■□□□ 1.07
SCAMP2-208ENST00000566557 FCHSD2O94868 740 aa21.73■■□□□ 1.07
SCAMP2-208ENST00000566557 MTHFSDQ2M296 383 aaKnown RBP21.72■■□□□ 1.07
SCAMP2-208ENST00000566557 MRS2Q9HD23 443 aa21.72■■□□□ 1.07
SCAMP2-208ENST00000566557 SLC15A2Q16348 729 aa21.71■■□□□ 1.07
SCAMP2-208ENST00000566557 CCDC184Q52MB2 194 aa21.71■■□□□ 1.07
SCAMP2-208ENST00000566557 DIEXFQ68CQ4 756 aaKnown RBP21.71■■□□□ 1.07
SCAMP2-208ENST00000566557 MAPK8IP3Q9UPT6 1336 aa21.71■■□□□ 1.07
SCAMP2-208ENST00000566557 ITGB4P16144 1822 aa21.71■■□□□ 1.07
SCAMP2-208ENST00000566557 CEP350Q5VT06 3117 aa21.71■■□□□ 1.07
SCAMP2-208ENST00000566557 HSP90AB1P08238 724 aaKnown RBP21.7■■□□□ 1.06
SCAMP2-208ENST00000566557 PRIM1P49642 420 aaKnown RBP21.7■■□□□ 1.06
SCAMP2-208ENST00000566557 TXNRD1Q16881 649 aa21.7■■□□□ 1.06
SCAMP2-208ENST00000566557 GAS2L2Q8NHY3 880 aa21.7■■□□□ 1.06
SCAMP2-208ENST00000566557 VIRMAQ69YN4 1812 aaKnown RBP21.7■■□□□ 1.06
SCAMP2-208ENST00000566557 AKAP4Q5JQC9 854 aa21.69■■□□□ 1.06
SCAMP2-208ENST00000566557 PHACTR3Q96KR7 559 aa21.69■■□□□ 1.06
SCAMP2-208ENST00000566557 MTFR1LQ9H019 292 aa21.69■■□□□ 1.06
SCAMP2-208ENST00000566557 PNNQ9H307 717 aaKnown RBP21.69■■□□□ 1.06
SCAMP2-208ENST00000566557 NKX1-1Q15270 411 aaPredicted RBP21.68■■□□□ 1.06
SCAMP2-208ENST00000566557 KDM6AO15550 1401 aaPredicted RBP21.68■■□□□ 1.06
SCAMP2-208ENST00000566557 SCN11AQ9UI33 1791 aa21.68■■□□□ 1.06
SCAMP2-208ENST00000566557 MAP3K5Q99683 1374 aa21.67■■□□□ 1.06
SCAMP2-208ENST00000566557 MPRIPQ6WCQ1 1025 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms