RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 ZCRB1Q8TBF4 217 aaKnown RBP23.09■■□□□ 1.29
TSR3-202ENST00000566296 SGIP1Q9BQI5 828 aa23.09■■□□□ 1.29
TSR3-202ENST00000566296 SYT17Q9BSW7 474 aa23.09■■□□□ 1.29
TSR3-202ENST00000566296 PCGF6Q9BYE7 350 aa23.09■■□□□ 1.29
TSR3-202ENST00000566296 ARXQ96QS3 562 aa23.08■■□□□ 1.29
TSR3-202ENST00000566296 GGNBP2Q9H3C7 697 aa23.08■■□□□ 1.29
TSR3-202ENST00000566296 PRIM1P49642 420 aaKnown RBP23.07■■□□□ 1.28
TSR3-202ENST00000566296 LY75O60449 1722 aa23.07■■□□□ 1.28
TSR3-202ENST00000566296 FYB1O15117 783 aa23.06■■□□□ 1.28
TSR3-202ENST00000566296 CGNL1Q0VF96 1302 aa23.06■■□□□ 1.28
TSR3-202ENST00000566296 MAP3K5Q99683 1374 aa23.05■■□□□ 1.28
TSR3-202ENST00000566296 RAPGEF4Q8WZA2 1011 aa23.05■■□□□ 1.28
TSR3-202ENST00000566296 AKT1S1Q96B36 256 aa23.05■■□□□ 1.28
TSR3-202ENST00000566296 TUBGCP6Q96RT7 1819 aa23.05■■□□□ 1.28
TSR3-202ENST00000566296 NSD2O96028 1365 aa23.04■■□□□ 1.28
TSR3-202ENST00000566296 SLC16A10Q8TF71 515 aa23.04■■□□□ 1.28
TSR3-202ENST00000566296 NBPF6Q5VWK0 638 aa23.03■■□□□ 1.28
TSR3-202ENST00000566296 NBPF4Q96M43 638 aa23.03■■□□□ 1.28
TSR3-202ENST00000566296 FLT4P35916 1363 aa23.02■■□□□ 1.28
TSR3-202ENST00000566296 KIF24Q5T7B8 1368 aa23.02■■□□□ 1.28
TSR3-202ENST00000566296 CHD4Q14839 1912 aa23.02■■□□□ 1.28
TSR3-202ENST00000566296 POLD1P28340 1107 aa23.02■■□□□ 1.28
TSR3-202ENST00000566296 USHBP1Q8N6Y0 703 aa23.02■■□□□ 1.28
TSR3-202ENST00000566296 TFCP2L1Q9NZI6 479 aa23.02■■□□□ 1.28
TSR3-202ENST00000566296 INSRP06213 1382 aa23.01■■□□□ 1.27
TSR3-202ENST00000566296 TATP17735 454 aaPredicted RBP23.01■■□□□ 1.27
TSR3-202ENST00000566296 PNPLA7Q6ZV29 1317 aa23.01■■□□□ 1.27
TSR3-202ENST00000566296 CCNL1Q9UK58 526 aaPredicted RBP23■■□□□ 1.27
TSR3-202ENST00000566296 KLHL34Q8N239 644 aa22.99■■□□□ 1.27
TSR3-202ENST00000566296 PCDH11XQ9BZA7 1347 aa22.99■■□□□ 1.27
TSR3-202ENST00000566296 PCDH11YQ9BZA8 1340 aa22.99■■□□□ 1.27
TSR3-202ENST00000566296 COL24A1Q17RW2 1714 aa22.99■■□□□ 1.27
TSR3-202ENST00000566296 NSD3Q9BZ95 1437 aa22.99■■□□□ 1.27
TSR3-202ENST00000566296 KCNQ4P56696 695 aa22.98■■□□□ 1.27
TSR3-202ENST00000566296 HSP90AB2PQ58FF8 381 aa22.97■■□□□ 1.27
TSR3-202ENST00000566296 C5P01031 1676 aa22.94■■□□□ 1.26
TSR3-202ENST00000566296 HMGB2P26583 209 aaKnown RBP22.93■■□□□ 1.26
TSR3-202ENST00000566296 ZNF784Q8NCA9 323 aaPredicted RBP22.93■■□□□ 1.26
TSR3-202ENST00000566296 PKD1L3Q7Z443 1732 aa22.93■■□□□ 1.26
TSR3-202ENST00000566296 ANKRD26Q9UPS8 1709 aa22.92■■□□□ 1.26
TSR3-202ENST00000566296 UTRNP46939 3433 aa22.92■■□□□ 1.26
TSR3-202ENST00000566296 GPR162Q16538 588 aa22.92■■□□□ 1.26
TSR3-202ENST00000566296 MSH5O43196 834 aa22.91■■□□□ 1.26
TSR3-202ENST00000566296 CARD14Q9BXL6 1004 aa22.91■■□□□ 1.26
TSR3-202ENST00000566296 TIMELESSQ9UNS1 1208 aa22.91■■□□□ 1.26
TSR3-202ENST00000566296 EMILIN1Q9Y6C2 1016 aa22.91■■□□□ 1.26
TSR3-202ENST00000566296 PALLDQ8WX93 1383 aa22.9■■□□□ 1.26
TSR3-202ENST00000566296 TOGARAM1Q9Y4F4 1720 aa22.9■■□□□ 1.26
TSR3-202ENST00000566296 PPM1GO15355 546 aaPredicted RBP22.89■■□□□ 1.25
TSR3-202ENST00000566296 ITGB4P16144 1822 aa22.89■■□□□ 1.25
TSR3-202ENST00000566296 TAF1LQ8IZX4 1826 aa22.88■■□□□ 1.25
TSR3-202ENST00000566296 MPRIPQ6WCQ1 1025 aa22.88■■□□□ 1.25
TSR3-202ENST00000566296 PELP1Q8IZL8 1130 aaKnown RBP22.88■■□□□ 1.25
TSR3-202ENST00000566296 MAP2P11137 1827 aaKnown RBP22.87■■□□□ 1.25
TSR3-202ENST00000566296 COL23A1Q86Y22 540 aaPredicted RBP22.87■■□□□ 1.25
TSR3-202ENST00000566296 NCAPD2Q15021 1401 aa22.87■■□□□ 1.25
TSR3-202ENST00000566296 CYP27B1O15528 508 aa22.86■■□□□ 1.25
TSR3-202ENST00000566296 SMARCC1Q92922 1105 aaPredicted RBP22.86■■□□□ 1.25
TSR3-202ENST00000566296 CLSPNQ9HAW4 1339 aa22.85■■□□□ 1.25
TSR3-202ENST00000566296 FLAD1Q8NFF5 587 aa22.84■■□□□ 1.25
TSR3-202ENST00000566296 POLR3GLQ9BT43 218 aa22.84■■□□□ 1.25
TSR3-202ENST00000566296 SPG7Q9UQ90 795 aa22.84■■□□□ 1.25
TSR3-202ENST00000566296 WASHC2AQ641Q2 1341 aa22.83■■□□□ 1.25
TSR3-202ENST00000566296 C4BP0C0L5 1744 aa22.83■■□□□ 1.25
TSR3-202ENST00000566296 MSL1Q68DK7 614 aa22.83■■□□□ 1.25
TSR3-202ENST00000566296 NLGN2Q8NFZ4 835 aa22.83■■□□□ 1.25
TSR3-202ENST00000566296 AK7Q96M32 723 aa22.81■■□□□ 1.24
TSR3-202ENST00000566296 NKX1-1Q15270 411 aaPredicted RBP22.79■■□□□ 1.24
TSR3-202ENST00000566296 EYA1Q99502 592 aa22.79■■□□□ 1.24
TSR3-202ENST00000566296 UBR3Q6ZT12 1888 aa22.78■■□□□ 1.24
TSR3-202ENST00000566296 PIGBQ92521 554 aa22.78■■□□□ 1.24
TSR3-202ENST00000566296 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.78■■□□□ 1.24
TSR3-202ENST00000566296 GRIN3BO60391 1043 aa22.77■■□□□ 1.24
TSR3-202ENST00000566296 TMOD3Q9NYL9 352 aa22.77■■□□□ 1.24
TSR3-202ENST00000566296 POLKQ9UBT6 870 aa22.77■■□□□ 1.24
TSR3-202ENST00000566296 IFNL2Q8IZJ0 200 aa22.75■■□□□ 1.23
TSR3-202ENST00000566296 PLEKHG2Q9H7P9 1386 aa22.75■■□□□ 1.23
TSR3-202ENST00000566296 PHF14O94880 888 aa22.74■■□□□ 1.23
TSR3-202ENST00000566296 TNNT2P45379 298 aaPredicted RBP22.74■■□□□ 1.23
TSR3-202ENST00000566296 CD2APQ9Y5K6 639 aa22.74■■□□□ 1.23
TSR3-202ENST00000566296 LOC102724428A0A0B4J2F2 783 aa22.73■■□□□ 1.23
TSR3-202ENST00000566296 PHKG2P15735 406 aa22.73■■□□□ 1.23
TSR3-202ENST00000566296 SIK1P57059 783 aa22.73■■□□□ 1.23
TSR3-202ENST00000566296 EIF4A2Q14240 407 aaKnown RBP22.73■■□□□ 1.23
TSR3-202ENST00000566296 YBX3P16989 372 aaKnown RBP eCLIP22.72■■□□□ 1.23
TSR3-202ENST00000566296 EIF4G2P78344 907 aaKnown RBP eCLIP22.72■■□□□ 1.23
TSR3-202ENST00000566296 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.71■■□□□ 1.23
TSR3-202ENST00000566296 SSFA2P28290 1259 aa22.71■■□□□ 1.23
TSR3-202ENST00000566296 C1QTNF8P60827 252 aa22.71■■□□□ 1.23
TSR3-202ENST00000566296 GIGYF1O75420 1035 aaPredicted RBP22.7■■□□□ 1.22
TSR3-202ENST00000566296 LINC00116Q8NCU8 138 aa22.7■■□□□ 1.22
TSR3-202ENST00000566296 GOLGB1Q14789 3259 aaKnown RBP22.7■■□□□ 1.22
TSR3-202ENST00000566296 SENP3-EIF4A1A0A087X0R7 540 aa22.69■■□□□ 1.22
TSR3-202ENST00000566296 AMIGO3Q86WK7 504 aa22.69■■□□□ 1.22
TSR3-202ENST00000566296 IGSF1Q8N6C5 1336 aa22.68■■□□□ 1.22
TSR3-202ENST00000566296 ATP6V1AP38606 617 aa22.68■■□□□ 1.22
TSR3-202ENST00000566296 ASAP1Q9ULH1 1129 aa22.68■■□□□ 1.22
TSR3-202ENST00000566296 GNPATO15228 680 aa22.67■■□□□ 1.22
TSR3-202ENST00000566296 HSPA5P11021 654 aaKnown RBP22.67■■□□□ 1.22
TSR3-202ENST00000566296 HSP90AB1P08238 724 aaKnown RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms