RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 THRAP3Q9Y2W1 955 aaKnown RBP25.18■■□□□ 1.62
CSPG4P13-201ENST00000565545 CAMTA1Q9Y6Y1 1673 aa25.17■■□□□ 1.62
CSPG4P13-201ENST00000565545 APAF1O14727 1248 aa25.16■■□□□ 1.62
CSPG4P13-201ENST00000565545 TNS1Q9HBL0 1735 aaKnown RBP25.16■■□□□ 1.62
CSPG4P13-201ENST00000565545 NEFMP07197 916 aa25.15■■□□□ 1.62
CSPG4P13-201ENST00000565545 PLEKHF1Q96S99 279 aa25.15■■□□□ 1.62
CSPG4P13-201ENST00000565545 ABCC6O95255 1503 aa25.15■■□□□ 1.62
CSPG4P13-201ENST00000565545 RSPH6AQ9H0K4 717 aa25.14■■□□□ 1.62
CSPG4P13-201ENST00000565545 MAPK8IP3Q9UPT6 1336 aa25.13■■□□□ 1.61
CSPG4P13-201ENST00000565545 PRKAR2BP31323 418 aa25.09■■□□□ 1.61
CSPG4P13-201ENST00000565545 CCDC27Q2M243 656 aa25.09■■□□□ 1.61
CSPG4P13-201ENST00000565545 IGSF1Q8N6C5 1336 aa25.09■■□□□ 1.61
CSPG4P13-201ENST00000565545 HMOX1P09601 288 aa25.08■■□□□ 1.61
CSPG4P13-201ENST00000565545 TOM1L2Q6ZVM7 507 aa25.08■■□□□ 1.61
CSPG4P13-201ENST00000565545 PPP1R1BQ9UD71 204 aaPredicted RBP25.08■■□□□ 1.61
CSPG4P13-201ENST00000565545 SALL2Q9Y467 1007 aaPredicted RBP25.08■■□□□ 1.61
CSPG4P13-201ENST00000565545 ZNF521Q96K83 1311 aa25.08■■□□□ 1.6
CSPG4P13-201ENST00000565545 CRB1P82279 1406 aa25.07■■□□□ 1.6
CSPG4P13-201ENST00000565545 COL18A1P39060 1754 aa25.07■■□□□ 1.6
CSPG4P13-201ENST00000565545 COL5A2P05997 1499 aaPredicted RBP25.07■■□□□ 1.6
CSPG4P13-201ENST00000565545 KDRP35968 1356 aa25.06■■□□□ 1.6
CSPG4P13-201ENST00000565545 DDB1Q16531 1140 aa25.06■■□□□ 1.6
CSPG4P13-201ENST00000565545 SULT6B1Q6IMI4 303 aa25.06■■□□□ 1.6
CSPG4P13-201ENST00000565545 EYA1Q99502 592 aa25.06■■□□□ 1.6
CSPG4P13-201ENST00000565545 SENP3-EIF4A1A0A087X0R7 540 aa25.05■■□□□ 1.6
CSPG4P13-201ENST00000565545 SPON1Q9HCB6 807 aa25.05■■□□□ 1.6
CSPG4P13-201ENST00000565545 LMO7Q8WWI1 1683 aa25.04■■□□□ 1.6
CSPG4P13-201ENST00000565545 TMPOP42166 694 aaKnown RBP25.04■■□□□ 1.6
CSPG4P13-201ENST00000565545 RGPD5Q99666 1765 aa25.03■■□□□ 1.6
CSPG4P13-201ENST00000565545 KCNQ2O43526 872 aa25.02■■□□□ 1.6
CSPG4P13-201ENST00000565545 GOLGA2Q08379 1002 aa25.02■■□□□ 1.6
CSPG4P13-201ENST00000565545 LTV1Q96GA3 475 aaPredicted RBP25.02■■□□□ 1.6
CSPG4P13-201ENST00000565545 OVOS2A0A0G2JMS6 1433 aa25.02■■□□□ 1.6
CSPG4P13-201ENST00000565545 DCAF8L1A6NGE4 600 aa25.01■■□□□ 1.59
CSPG4P13-201ENST00000565545 WWC1Q8IX03 1113 aa25.01■■□□□ 1.59
CSPG4P13-201ENST00000565545 FAM208AQ9UK61 1670 aaKnown RBP25.01■■□□□ 1.59
CSPG4P13-201ENST00000565545 NFE2L2Q16236 605 aa25■■□□□ 1.59
CSPG4P13-201ENST00000565545 AEBP1Q8IUX7 1158 aa25■■□□□ 1.59
CSPG4P13-201ENST00000565545 WDR63Q8IWG1 891 aa25■■□□□ 1.59
CSPG4P13-201ENST00000565545 ANKRD24Q8TF21 1146 aa25■■□□□ 1.59
CSPG4P13-201ENST00000565545 CSB-PGBD3P0DP91 1061 aa24.99■■□□□ 1.59
CSPG4P13-201ENST00000565545 AXIN2Q9Y2T1 843 aa24.99■■□□□ 1.59
CSPG4P13-201ENST00000565545 RRP7AQ9Y3A4 280 aaKnown RBP24.99■■□□□ 1.59
CSPG4P13-201ENST00000565545 NCAPD2Q15021 1401 aa24.98■■□□□ 1.59
CSPG4P13-201ENST00000565545 PLSCR1O15162 318 aa24.98■■□□□ 1.59
CSPG4P13-201ENST00000565545 YY1P25490 414 aa24.98■■□□□ 1.59
CSPG4P13-201ENST00000565545 RIPK4P57078 832 aa24.98■■□□□ 1.59
CSPG4P13-201ENST00000565545 NEUROD2Q15784 382 aa24.98■■□□□ 1.59
CSPG4P13-201ENST00000565545 PHACTR3Q96KR7 559 aa24.98■■□□□ 1.59
CSPG4P13-201ENST00000565545 CDCA7Q9BWT1 371 aaPredicted RBP24.98■■□□□ 1.59
CSPG4P13-201ENST00000565545 BCL11BQ9C0K0 894 aaPredicted RBP24.98■■□□□ 1.59
CSPG4P13-201ENST00000565545 ERBB3P21860 1342 aa24.97■■□□□ 1.59
CSPG4P13-201ENST00000565545 WDR17Q8IZU2 1322 aa24.97■■□□□ 1.59
CSPG4P13-201ENST00000565545 RREB1Q92766 1687 aa24.97■■□□□ 1.59
CSPG4P13-201ENST00000565545 RGPD2P0DJD1 1756 aa24.96■■□□□ 1.59
CSPG4P13-201ENST00000565545 NUP188Q5SRE5 1749 aa24.96■■□□□ 1.59
CSPG4P13-201ENST00000565545 LMOD3Q0VAK6 560 aa24.96■■□□□ 1.59
CSPG4P13-201ENST00000565545 NBPF6Q5VWK0 638 aa24.96■■□□□ 1.59
CSPG4P13-201ENST00000565545 NBPF4Q96M43 638 aa24.96■■□□□ 1.59
CSPG4P13-201ENST00000565545 E9PSI1 815 aa24.95■■□□□ 1.58
CSPG4P13-201ENST00000565545 PTF1AQ7RTS3 328 aa24.95■■□□□ 1.58
CSPG4P13-201ENST00000565545 PARP4Q9UKK3 1724 aaKnown RBP24.95■■□□□ 1.58
CSPG4P13-201ENST00000565545 DLG5Q8TDM6 1919 aa24.94■■□□□ 1.58
CSPG4P13-201ENST00000565545 SLFN5Q08AF3 891 aa24.94■■□□□ 1.58
CSPG4P13-201ENST00000565545 MARCH10Q8NA82 808 aaPredicted RBP24.94■■□□□ 1.58
CSPG4P13-201ENST00000565545 CDCA7LQ96GN5 454 aa24.93■■□□□ 1.58
CSPG4P13-201ENST00000565545 TRIM35Q9UPQ4 493 aa24.93■■□□□ 1.58
CSPG4P13-201ENST00000565545 TRMT2AQ8IZ69 625 aaKnown RBP24.92■■□□□ 1.58
CSPG4P13-201ENST00000565545 IL16Q14005 1332 aa24.91■■□□□ 1.58
CSPG4P13-201ENST00000565545 EXOC5O00471 708 aa24.91■■□□□ 1.58
CSPG4P13-201ENST00000565545 CALD1Q05682 793 aaKnown RBP24.91■■□□□ 1.58
CSPG4P13-201ENST00000565545 GAS2L2Q8NHY3 880 aa24.91■■□□□ 1.58
CSPG4P13-201ENST00000565545 CARD10Q9BWT7 1032 aa24.91■■□□□ 1.58
CSPG4P13-201ENST00000565545 PLEKHG2Q9H7P9 1386 aa24.91■■□□□ 1.58
CSPG4P13-201ENST00000565545 ANO8Q9HCE9 1232 aaPredicted RBP24.9■■□□□ 1.58
CSPG4P13-201ENST00000565545 DUSP27Q5VZP5 1158 aa24.88■■□□□ 1.57
CSPG4P13-201ENST00000565545 PROM2Q8N271 834 aa24.87■■□□□ 1.57
CSPG4P13-201ENST00000565545 USHBP1Q8N6Y0 703 aa24.87■■□□□ 1.57
CSPG4P13-201ENST00000565545 HTATSF1O43719 755 aaKnown RBP24.86■■□□□ 1.57
CSPG4P13-201ENST00000565545 ZBTB7AO95365 584 aa24.86■■□□□ 1.57
CSPG4P13-201ENST00000565545 MYH16Q9H6N6 1097 aa24.86■■□□□ 1.57
CSPG4P13-201ENST00000565545 NLRP2Q9NX02 1062 aa24.86■■□□□ 1.57
CSPG4P13-201ENST00000565545 STK32BQ9NY57 414 aa24.86■■□□□ 1.57
CSPG4P13-201ENST00000565545 LRRC37A3O60309 1634 aa24.86■■□□□ 1.57
CSPG4P13-201ENST00000565545 TXNRD1Q16881 649 aa24.85■■□□□ 1.57
CSPG4P13-201ENST00000565545 MTHFSDQ2M296 383 aaKnown RBP24.85■■□□□ 1.57
CSPG4P13-201ENST00000565545 AMOTQ4VCS5 1084 aa24.85■■□□□ 1.57
CSPG4P13-201ENST00000565545 PDGFDQ9GZP0 370 aaPredicted RBP24.85■■□□□ 1.57
CSPG4P13-201ENST00000565545 PLEKHO1Q53GL0 409 aaPredicted RBP24.84■■□□□ 1.57
CSPG4P13-201ENST00000565545 SPINK5Q9NQ38 1064 aaPredicted RBP24.83■■□□□ 1.57
CSPG4P13-201ENST00000565545 ATF5Q9Y2D1 282 aaPredicted RBP24.83■■□□□ 1.57
CSPG4P13-201ENST00000565545 BCL9O00512 1426 aa24.83■■□□□ 1.57
CSPG4P13-201ENST00000565545 RAPGEF4Q8WZA2 1011 aa24.8■■□□□ 1.56
CSPG4P13-201ENST00000565545 SLC15A2Q16348 729 aa24.79■■□□□ 1.56
CSPG4P13-201ENST00000565545 RTF1Q92541 710 aaKnown RBP24.79■■□□□ 1.56
CSPG4P13-201ENST00000565545 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.79■■□□□ 1.56
CSPG4P13-201ENST00000565545 GNAT3A8MTJ3 354 aa24.78■■□□□ 1.56
CSPG4P13-201ENST00000565545 TATP17735 454 aaPredicted RBP24.78■■□□□ 1.56
CSPG4P13-201ENST00000565545 GNAI1P63096 354 aa24.78■■□□□ 1.56
CSPG4P13-201ENST00000565545 IFT57Q9NWB7 429 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms