RNA–Protein interactions for RNA: ENST00000564557.1

CNOT1-206, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-206ENST00000564557 MAP2P11137 1827 aaKnown RBP18.62■□□□□ 0.57
CNOT1-206ENST00000564557 ANKRD26Q9UPS8 1709 aa18.61■□□□□ 0.57
CNOT1-206ENST00000564557 TATP17735 454 aaPredicted RBP18.61■□□□□ 0.57
CNOT1-206ENST00000564557 USHBP1Q8N6Y0 703 aa18.61■□□□□ 0.57
CNOT1-206ENST00000564557 BCL11BQ9C0K0 894 aaPredicted RBP18.6■□□□□ 0.57
CNOT1-206ENST00000564557 EZH2Q15910 746 aaKnown RBP18.59■□□□□ 0.57
CNOT1-206ENST00000564557 ZCRB1Q8TBF4 217 aaKnown RBP18.59■□□□□ 0.57
CNOT1-206ENST00000564557 PEAK1Q9H792 1746 aa18.58■□□□□ 0.57
CNOT1-206ENST00000564557 CNGB1Q14028 1251 aaPredicted RBP18.58■□□□□ 0.56
CNOT1-206ENST00000564557 CC2D1BQ5T0F9 858 aaKnown RBP18.58■□□□□ 0.56
CNOT1-206ENST00000564557 RGPD2P0DJD1 1756 aa18.58■□□□□ 0.56
CNOT1-206ENST00000564557 AMER1Q5JTC6 1135 aaPredicted RBP18.57■□□□□ 0.56
CNOT1-206ENST00000564557 PARD3Q8TEW0 1356 aa18.56■□□□□ 0.56
CNOT1-206ENST00000564557 KAT6BQ8WYB5 2073 aa18.56■□□□□ 0.56
CNOT1-206ENST00000564557 SAMD1Q6SPF0 538 aaPredicted RBP18.56■□□□□ 0.56
CNOT1-206ENST00000564557 ACSBG1Q96GR2 724 aa18.56■□□□□ 0.56
CNOT1-206ENST00000564557 CAMKK2Q96RR4 588 aa18.56■□□□□ 0.56
CNOT1-206ENST00000564557 TNS1Q9HBL0 1735 aaKnown RBP18.56■□□□□ 0.56
CNOT1-206ENST00000564557 BCL9O00512 1426 aa18.56■□□□□ 0.56
CNOT1-206ENST00000564557 PER1O15534 1290 aaPredicted RBP18.55■□□□□ 0.56
CNOT1-206ENST00000564557 NBPF14Q5TI25 921 aa18.54■□□□□ 0.56
CNOT1-206ENST00000564557 PLSCR1O15162 318 aa18.53■□□□□ 0.56
CNOT1-206ENST00000564557 EIF4A2Q14240 407 aaKnown RBP18.53■□□□□ 0.56
CNOT1-206ENST00000564557 EYA1Q99502 592 aa18.53■□□□□ 0.56
CNOT1-206ENST00000564557 SBF2Q86WG5 1849 aa18.53■□□□□ 0.56
CNOT1-206ENST00000564557 SYTL4Q96C24 671 aaPredicted RBP18.52■□□□□ 0.56
CNOT1-206ENST00000564557 SPINK5Q9NQ38 1064 aaPredicted RBP18.52■□□□□ 0.56
CNOT1-206ENST00000564557 MEGF6O75095 1541 aa18.52■□□□□ 0.56
CNOT1-206ENST00000564557 KCNQ2O43526 872 aa18.51■□□□□ 0.55
CNOT1-206ENST00000564557 SPG7Q9UQ90 795 aa18.51■□□□□ 0.55
CNOT1-206ENST00000564557 PCDH11XQ9BZA7 1347 aa18.5■□□□□ 0.55
CNOT1-206ENST00000564557 PCDH11YQ9BZA8 1340 aa18.5■□□□□ 0.55
CNOT1-206ENST00000564557 ZEB1P37275 1124 aaPredicted RBP18.5■□□□□ 0.55
CNOT1-206ENST00000564557 PTF1AQ7RTS3 328 aa18.5■□□□□ 0.55
CNOT1-206ENST00000564557 PSDA5PKW4 1024 aaPredicted RBP18.49■□□□□ 0.55
CNOT1-206ENST00000564557 MTHFSP49914 203 aa18.49■□□□□ 0.55
CNOT1-206ENST00000564557 NPC1L1Q9UHC9 1359 aa18.48■□□□□ 0.55
CNOT1-206ENST00000564557 PRIM1P49642 420 aaKnown RBP18.47■□□□□ 0.55
CNOT1-206ENST00000564557 R3HDM1Q15032 1099 aaKnown RBP18.47■□□□□ 0.55
CNOT1-206ENST00000564557 CAPN15O75808 1086 aa18.45■□□□□ 0.54
CNOT1-206ENST00000564557 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.45■□□□□ 0.549e-14■■■□□ 16.5
CNOT1-206ENST00000564557 IGSF1Q8N6C5 1336 aa18.45■□□□□ 0.54
CNOT1-206ENST00000564557 NHSQ6T4R5 1651 aa18.44■□□□□ 0.54
CNOT1-206ENST00000564557 TXNRD1Q16881 649 aa18.44■□□□□ 0.54
CNOT1-206ENST00000564557 DIAPH1O60610 1272 aaKnown RBP18.43■□□□□ 0.54
CNOT1-206ENST00000564557 PLEKHO1Q53GL0 409 aaPredicted RBP18.43■□□□□ 0.54
CNOT1-206ENST00000564557 SULT6B1Q6IMI4 303 aa18.43■□□□□ 0.54
CNOT1-206ENST00000564557 IFNL2Q8IZJ0 200 aa18.43■□□□□ 0.54
CNOT1-206ENST00000564557 NCAPD2Q15021 1401 aa18.42■□□□□ 0.54
CNOT1-206ENST00000564557 CYP27B1O15528 508 aa18.42■□□□□ 0.54
CNOT1-206ENST00000564557 CFAP53Q96M91 514 aa18.42■□□□□ 0.54
CNOT1-206ENST00000564557 RGPD3A6NKT7 1758 aaPredicted RBP18.41■□□□□ 0.54
CNOT1-206ENST00000564557 RGPD4Q7Z3J3 1758 aa18.41■□□□□ 0.54
CNOT1-206ENST00000564557 IL13P35225 146 aa18.41■□□□□ 0.54
CNOT1-206ENST00000564557 AMOTQ4VCS5 1084 aa18.41■□□□□ 0.54
CNOT1-206ENST00000564557 RREB1Q92766 1687 aa18.41■□□□□ 0.54
CNOT1-206ENST00000564557 MPRIPQ6WCQ1 1025 aa18.4■□□□□ 0.54
CNOT1-206ENST00000564557 PROM2Q8N271 834 aa18.4■□□□□ 0.54
CNOT1-206ENST00000564557 STK32BQ9NY57 414 aa18.4■□□□□ 0.54
CNOT1-206ENST00000564557 SHANK3Q9BYB0 1731 aa18.4■□□□□ 0.54
CNOT1-206ENST00000564557 BTAF1O14981 1849 aa18.39■□□□□ 0.54
CNOT1-206ENST00000564557 HSP90AB1P08238 724 aaKnown RBP18.39■□□□□ 0.53
CNOT1-206ENST00000564557 PLEKHG2Q9H7P9 1386 aa18.39■□□□□ 0.53
CNOT1-206ENST00000564557 NUP188Q5SRE5 1749 aa18.38■□□□□ 0.53
CNOT1-206ENST00000564557 DOT1LQ8TEK3 1739 aa18.38■□□□□ 0.53
CNOT1-206ENST00000564557 PHKG2P15735 406 aa18.38■□□□□ 0.53
CNOT1-206ENST00000564557 C1orf141Q5JVX7 400 aa18.38■□□□□ 0.53
CNOT1-206ENST00000564557 AEBP1Q8IUX7 1158 aa18.38■□□□□ 0.53
CNOT1-206ENST00000564557 PKD1L3Q7Z443 1732 aa18.37■□□□□ 0.53
CNOT1-206ENST00000564557 U2SURPO15042 1029 aaKnown RBP18.37■□□□□ 0.53
CNOT1-206ENST00000564557 NKX1-1Q15270 411 aaPredicted RBP18.37■□□□□ 0.53
CNOT1-206ENST00000564557 SLC27A3Q5K4L6 730 aa18.37■□□□□ 0.53
CNOT1-206ENST00000564557 ZNF530Q6P9A1 599 aaPredicted RBP18.37■□□□□ 0.53
CNOT1-206ENST00000564557 HMOX1P09601 288 aa18.36■□□□□ 0.53
CNOT1-206ENST00000564557 HMGB2P26583 209 aaKnown RBP18.36■□□□□ 0.53
CNOT1-206ENST00000564557 NUDCQ9Y266 331 aa18.36■□□□□ 0.53
CNOT1-206ENST00000564557 DDX10Q13206 875 aaKnown RBP18.35■□□□□ 0.53
CNOT1-206ENST00000564557 SMARCC1Q92922 1105 aaPredicted RBP18.35■□□□□ 0.53
CNOT1-206ENST00000564557 TMOD3Q9NYL9 352 aa18.35■□□□□ 0.53
CNOT1-206ENST00000564557 PPP2R1AP30153 589 aa18.34■□□□□ 0.53
CNOT1-206ENST00000564557 SLC15A2Q16348 729 aa18.34■□□□□ 0.53
CNOT1-206ENST00000564557 CCNL1Q9UK58 526 aaPredicted RBP18.34■□□□□ 0.53
CNOT1-206ENST00000564557 DCAF5Q96JK2 942 aa18.33■□□□□ 0.52
CNOT1-206ENST00000564557 ANO8Q9HCE9 1232 aaPredicted RBP18.33■□□□□ 0.52
CNOT1-206ENST00000564557 KDRP35968 1356 aa18.32■□□□□ 0.52
CNOT1-206ENST00000564557 PIGBQ92521 554 aa18.31■□□□□ 0.52
CNOT1-206ENST00000564557 ERVV-2B6SEH9 535 aa18.3■□□□□ 0.52
CNOT1-206ENST00000564557 CABP4P57796 275 aa18.3■□□□□ 0.52
CNOT1-206ENST00000564557 LRRC4BQ9NT99 713 aa18.3■□□□□ 0.52
CNOT1-206ENST00000564557 PALLDQ8WX93 1383 aa18.3■□□□□ 0.52
CNOT1-206ENST00000564557 KCNQ4P56696 695 aa18.29■□□□□ 0.52
CNOT1-206ENST00000564557 SPON1Q9HCB6 807 aa18.29■□□□□ 0.52
CNOT1-206ENST00000564557 ZNF219Q9P2Y4 722 aaPredicted RBP18.29■□□□□ 0.52
CNOT1-206ENST00000564557 AKAP4Q5JQC9 854 aa18.28■□□□□ 0.52
CNOT1-206ENST00000564557 TFCP2L1Q9NZI6 479 aa18.28■□□□□ 0.52
CNOT1-206ENST00000564557 ITGB4P16144 1822 aa18.28■□□□□ 0.52
CNOT1-206ENST00000564557 U2AF1L5P0DN76 240 aaPredicted RBP18.27■□□□□ 0.52
CNOT1-206ENST00000564557 U2AF1Q01081 240 aaKnown RBP eCLIP18.27■□□□□ 0.52
CNOT1-206ENST00000564557 RALBP1Q15311 655 aa18.27■□□□□ 0.52
CNOT1-206ENST00000564557 PPP1R1BQ9UD71 204 aaPredicted RBP18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms