RNA–Protein interactions for RNA: ENST00000564544.1

COX4I1-206, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 3

Gene COX4I1, Length 617 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-206ENST00000564544 CHD4Q14839 1912 aa19.09■□□□□ 0.65
COX4I1-206ENST00000564544 CGNL1Q0VF96 1302 aa19.08■□□□□ 0.65
COX4I1-206ENST00000564544 RTL1A6NKG5 1358 aa19.07■□□□□ 0.64
COX4I1-206ENST00000564544 SENP3-EIF4A1A0A087X0R7 540 aa19.07■□□□□ 0.64
COX4I1-206ENST00000564544 CCNL1Q9UK58 526 aaPredicted RBP19.07■□□□□ 0.64
COX4I1-206ENST00000564544 QSER1Q2KHR3 1735 aa19.07■□□□□ 0.64
COX4I1-206ENST00000564544 GRIN3BO60391 1043 aa19.05■□□□□ 0.64
COX4I1-206ENST00000564544 PELP1Q8IZL8 1130 aaKnown RBP19.05■□□□□ 0.64
COX4I1-206ENST00000564544 TESK2Q96S53 571 aa19.05■□□□□ 0.64
COX4I1-206ENST00000564544 NSD2O96028 1365 aa19.05■□□□□ 0.64
COX4I1-206ENST00000564544 USP47Q96K76 1375 aa19.05■□□□□ 0.64
COX4I1-206ENST00000564544 SMG6Q86US8 1419 aaKnown RBP19.04■□□□□ 0.64
COX4I1-206ENST00000564544 RAPGEF4Q8WZA2 1011 aa19.04■□□□□ 0.64
COX4I1-206ENST00000564544 ST20-MTHFSA0A0A6YYL1 179 aa19.03■□□□□ 0.64
COX4I1-206ENST00000564544 MSH5O43196 834 aa19.03■□□□□ 0.64
COX4I1-206ENST00000564544 GIGYF1O75420 1035 aaPredicted RBP19.03■□□□□ 0.64
COX4I1-206ENST00000564544 KCNQ4P56696 695 aa19.03■□□□□ 0.64
COX4I1-206ENST00000564544 MEGF6O75095 1541 aa19.02■□□□□ 0.64
COX4I1-206ENST00000564544 COL24A1Q17RW2 1714 aa19.01■□□□□ 0.63
COX4I1-206ENST00000564544 TATP17735 454 aaPredicted RBP19.01■□□□□ 0.63
COX4I1-206ENST00000564544 FLAD1Q8NFF5 587 aa19.01■□□□□ 0.63
COX4I1-206ENST00000564544 NBPF6Q5VWK0 638 aa19■□□□□ 0.63
COX4I1-206ENST00000564544 NLGN2Q8NFZ4 835 aa19■□□□□ 0.63
COX4I1-206ENST00000564544 NBPF4Q96M43 638 aa19■□□□□ 0.63
COX4I1-206ENST00000564544 COL23A1Q86Y22 540 aaPredicted RBP18.99■□□□□ 0.63
COX4I1-206ENST00000564544 LY75O60449 1722 aa18.99■□□□□ 0.63
COX4I1-206ENST00000564544 DOT1LQ8TEK3 1739 aa18.99■□□□□ 0.63
COX4I1-206ENST00000564544 PCDH11XQ9BZA7 1347 aa18.99■□□□□ 0.63
COX4I1-206ENST00000564544 PCDH11YQ9BZA8 1340 aa18.99■□□□□ 0.63
COX4I1-206ENST00000564544 FBLN1P23142 703 aa18.98■□□□□ 0.63
COX4I1-206ENST00000564544 TMF1P82094 1093 aa18.98■□□□□ 0.63
COX4I1-206ENST00000564544 RRS1Q15050 365 aaKnown RBP18.98■□□□□ 0.63
COX4I1-206ENST00000564544 KIF24Q5T7B8 1368 aa18.97■□□□□ 0.63
COX4I1-206ENST00000564544 FYB1O15117 783 aa18.97■□□□□ 0.63
COX4I1-206ENST00000564544 INSRP06213 1382 aa18.96■□□□□ 0.63
COX4I1-206ENST00000564544 CDCA8Q53HL2 280 aa18.96■□□□□ 0.63
COX4I1-206ENST00000564544 GGNBP2Q9H3C7 697 aa18.96■□□□□ 0.63
COX4I1-206ENST00000564544 CD2APQ9Y5K6 639 aa18.96■□□□□ 0.63
COX4I1-206ENST00000564544 USHBP1Q8N6Y0 703 aa18.95■□□□□ 0.62
COX4I1-206ENST00000564544 SMARCC1Q92922 1105 aaPredicted RBP18.95■□□□□ 0.62
COX4I1-206ENST00000564544 FLT4P35916 1363 aa18.94■□□□□ 0.62
COX4I1-206ENST00000564544 UTRNP46939 3433 aa18.94■□□□□ 0.62
COX4I1-206ENST00000564544 PALLDQ8WX93 1383 aa18.93■□□□□ 0.62
COX4I1-206ENST00000564544 TUBGCP6Q96RT7 1819 aa18.93■□□□□ 0.62
COX4I1-206ENST00000564544 YBX3P16989 372 aaKnown RBP eCLIP18.93■□□□□ 0.621e-21■■■□□ 16.4
COX4I1-206ENST00000564544 SHANK3Q9BYB0 1731 aa18.93■□□□□ 0.62
COX4I1-206ENST00000564544 HSP90AB2PQ58FF8 381 aa18.92■□□□□ 0.62
COX4I1-206ENST00000564544 MSL1Q68DK7 614 aa18.92■□□□□ 0.62
COX4I1-206ENST00000564544 MPRIPQ6WCQ1 1025 aa18.92■□□□□ 0.62
COX4I1-206ENST00000564544 NSD3Q9BZ95 1437 aa18.91■□□□□ 0.62
COX4I1-206ENST00000564544 AK7Q96M32 723 aa18.91■□□□□ 0.62
COX4I1-206ENST00000564544 RGPD2P0DJD1 1756 aa18.9■□□□□ 0.62
COX4I1-206ENST00000564544 CYP27B1O15528 508 aa18.88■□□□□ 0.61
COX4I1-206ENST00000564544 SPG7Q9UQ90 795 aa18.88■□□□□ 0.61
COX4I1-206ENST00000564544 C5P01031 1676 aa18.86■□□□□ 0.61
COX4I1-206ENST00000564544 ATP10DQ9P241 1426 aa18.86■□□□□ 0.61
COX4I1-206ENST00000564544 SSFA2P28290 1259 aa18.85■□□□□ 0.61
COX4I1-206ENST00000564544 NKX1-1Q15270 411 aaPredicted RBP18.85■□□□□ 0.61
COX4I1-206ENST00000564544 GPBP1L1Q9HC44 474 aaPredicted RBP18.85■□□□□ 0.61
COX4I1-206ENST00000564544 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.85■□□□□ 0.61
COX4I1-206ENST00000564544 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.83■□□□□ 0.6
COX4I1-206ENST00000564544 PIGBQ92521 554 aa18.83■□□□□ 0.6
COX4I1-206ENST00000564544 LOC102724428A0A0B4J2F2 783 aa18.82■□□□□ 0.6
COX4I1-206ENST00000564544 SIK1P57059 783 aa18.82■□□□□ 0.6
COX4I1-206ENST00000564544 TMOD3Q9NYL9 352 aa18.82■□□□□ 0.6
COX4I1-206ENST00000564544 EMILIN1Q9Y6C2 1016 aa18.82■□□□□ 0.6
COX4I1-206ENST00000564544 C4BP0C0L5 1744 aa18.82■□□□□ 0.6
COX4I1-206ENST00000564544 NCAPD2Q15021 1401 aa18.82■□□□□ 0.6
COX4I1-206ENST00000564544 PPM1GO15355 546 aaPredicted RBP18.81■□□□□ 0.6
COX4I1-206ENST00000564544 PHF14O94880 888 aa18.81■□□□□ 0.6
COX4I1-206ENST00000564544 WASHC2AQ641Q2 1341 aa18.8■□□□□ 0.6
COX4I1-206ENST00000564544 IGSF1Q8N6C5 1336 aa18.8■□□□□ 0.6
COX4I1-206ENST00000564544 KIF20BQ96Q89 1820 aa18.8■□□□□ 0.6
COX4I1-206ENST00000564544 CARD14Q9BXL6 1004 aa18.8■□□□□ 0.6
COX4I1-206ENST00000564544 ADCY9O60503 1353 aa18.8■□□□□ 0.6
COX4I1-206ENST00000564544 TAF1LQ8IZX4 1826 aa18.79■□□□□ 0.6
COX4I1-206ENST00000564544 IFNL2Q8IZJ0 200 aa18.79■□□□□ 0.6
COX4I1-206ENST00000564544 PKD1L3Q7Z443 1732 aa18.79■□□□□ 0.6
COX4I1-206ENST00000564544 IFFO2Q5TF58 517 aa18.78■□□□□ 0.6
COX4I1-206ENST00000564544 PLEKHG2Q9H7P9 1386 aa18.78■□□□□ 0.6
COX4I1-206ENST00000564544 GNPATO15228 680 aa18.77■□□□□ 0.6
COX4I1-206ENST00000564544 AMIGO3Q86WK7 504 aa18.77■□□□□ 0.6
COX4I1-206ENST00000564544 LINC00116Q8NCU8 138 aa18.77■□□□□ 0.6
COX4I1-206ENST00000564544 HSPA6P17066 643 aa18.76■□□□□ 0.59
COX4I1-206ENST00000564544 ATP6V1AP38606 617 aa18.76■□□□□ 0.59
COX4I1-206ENST00000564544 EYA1Q99502 592 aa18.76■□□□□ 0.59
COX4I1-206ENST00000564544 TOGARAM1Q9Y4F4 1720 aa18.76■□□□□ 0.59
COX4I1-206ENST00000564544 GOLGB1Q14789 3259 aaKnown RBP18.76■□□□□ 0.59
COX4I1-206ENST00000564544 PHKG2P15735 406 aa18.75■□□□□ 0.59
COX4I1-206ENST00000564544 ITGB4P16144 1822 aa18.74■□□□□ 0.59
COX4I1-206ENST00000564544 ZNF526Q8TF50 670 aaPredicted RBP18.74■□□□□ 0.59
COX4I1-206ENST00000564544 ASAP1Q9ULH1 1129 aa18.74■□□□□ 0.59
COX4I1-206ENST00000564544 UBR3Q6ZT12 1888 aa18.73■□□□□ 0.59
COX4I1-206ENST00000564544 ITPK1Q13572 414 aa18.73■□□□□ 0.59
COX4I1-206ENST00000564544 NLGN1Q8N2Q7 840 aa18.73■□□□□ 0.59
COX4I1-206ENST00000564544 HSP90AB1P08238 724 aaKnown RBP18.72■□□□□ 0.59
COX4I1-206ENST00000564544 MMP10P09238 476 aa18.72■□□□□ 0.59
COX4I1-206ENST00000564544 SMIM5Q71RC9 77 aa18.72■□□□□ 0.59
COX4I1-206ENST00000564544 ATG3Q9NT62 314 aa18.72■□□□□ 0.59
COX4I1-206ENST00000564544 POLKQ9UBT6 870 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms