RNA–Protein interactions for RNA: ENST00000564457.1

LYRM1-206, Transcript of LYR motif containing 1, humanhuman

TSL 3

Gene LYRM1, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-206ENST00000564457 HMGB2P26583 209 aaKnown RBP23.32■■□□□ 1.32
LYRM1-206ENST00000564457 CCNL1Q9UK58 526 aaPredicted RBP23.32■■□□□ 1.32
LYRM1-206ENST00000564457 MSH5O43196 834 aa23.3■■□□□ 1.32
LYRM1-206ENST00000564457 YBX3P16989 372 aaKnown RBP eCLIP23.3■■□□□ 1.32
LYRM1-206ENST00000564457 COL23A1Q86Y22 540 aaPredicted RBP23.3■■□□□ 1.32
LYRM1-206ENST00000564457 A0A1W2PP64 1363 aa23.29■■□□□ 1.32
LYRM1-206ENST00000564457 HOXC9P31274 260 aa23.29■■□□□ 1.32
LYRM1-206ENST00000564457 COG3Q96JB2 828 aa23.29■■□□□ 1.32
LYRM1-206ENST00000564457 CEP350Q5VT06 3117 aa23.29■■□□□ 1.32
LYRM1-206ENST00000564457 AMPHP49418 695 aa23.28■■□□□ 1.32
LYRM1-206ENST00000564457 MAP3K19Q56UN5 1328 aa23.28■■□□□ 1.32
LYRM1-206ENST00000564457 NSD2O96028 1365 aa23.27■■□□□ 1.32
LYRM1-206ENST00000564457 COL24A1Q17RW2 1714 aa23.27■■□□□ 1.32
LYRM1-206ENST00000564457 LTN1O94822 1766 aa23.27■■□□□ 1.32
LYRM1-206ENST00000564457 QSER1Q2KHR3 1735 aa23.26■■□□□ 1.31
LYRM1-206ENST00000564457 CD2APQ9Y5K6 639 aa23.26■■□□□ 1.31
LYRM1-206ENST00000564457 CGNL1Q0VF96 1302 aa23.26■■□□□ 1.31
LYRM1-206ENST00000564457 USP47Q96K76 1375 aa23.26■■□□□ 1.31
LYRM1-206ENST00000564457 FLAD1Q8NFF5 587 aa23.25■■□□□ 1.31
LYRM1-206ENST00000564457 SLC24A1O60721 1099 aa23.23■■□□□ 1.31
LYRM1-206ENST00000564457 FBLN1P23142 703 aa23.22■■□□□ 1.31
LYRM1-206ENST00000564457 NBPF6Q5VWK0 638 aa23.22■■□□□ 1.31
LYRM1-206ENST00000564457 NBPF4Q96M43 638 aa23.22■■□□□ 1.31
LYRM1-206ENST00000564457 MSL1Q68DK7 614 aa23.2■■□□□ 1.3
LYRM1-206ENST00000564457 RAPGEF4Q8WZA2 1011 aa23.2■■□□□ 1.3
LYRM1-206ENST00000564457 GPBP1L1Q9HC44 474 aaPredicted RBP23.2■■□□□ 1.3
LYRM1-206ENST00000564457 SHANK3Q9BYB0 1731 aa23.19■■□□□ 1.3
LYRM1-206ENST00000564457 ATP10DQ9P241 1426 aa23.18■■□□□ 1.3
LYRM1-206ENST00000564457 MEGF6O75095 1541 aa23.18■■□□□ 1.3
LYRM1-206ENST00000564457 FAM208AQ9UK61 1670 aaKnown RBP23.17■■□□□ 1.3
LYRM1-206ENST00000564457 LY75O60449 1722 aa23.16■■□□□ 1.3
LYRM1-206ENST00000564457 TATP17735 454 aaPredicted RBP23.16■■□□□ 1.3
LYRM1-206ENST00000564457 TESK2Q96S53 571 aa23.16■■□□□ 1.3
LYRM1-206ENST00000564457 RTL1A6NKG5 1358 aa23.15■■□□□ 1.3
LYRM1-206ENST00000564457 RRS1Q15050 365 aaKnown RBP23.14■■□□□ 1.29
LYRM1-206ENST00000564457 ST20-MTHFSA0A0A6YYL1 179 aa23.13■■□□□ 1.29
LYRM1-206ENST00000564457 FYB1O15117 783 aa23.13■■□□□ 1.29
LYRM1-206ENST00000564457 HSPA6P17066 643 aa23.13■■□□□ 1.29
LYRM1-206ENST00000564457 MPRIPQ6WCQ1 1025 aa23.13■■□□□ 1.29
LYRM1-206ENST00000564457 USHBP1Q8N6Y0 703 aa23.13■■□□□ 1.29
LYRM1-206ENST00000564457 SMARCC1Q92922 1105 aaPredicted RBP23.13■■□□□ 1.29
LYRM1-206ENST00000564457 PCDH11XQ9BZA7 1347 aa23.12■■□□□ 1.29
LYRM1-206ENST00000564457 PCDH11YQ9BZA8 1340 aa23.12■■□□□ 1.29
LYRM1-206ENST00000564457 TUBGCP6Q96RT7 1819 aa23.12■■□□□ 1.29
LYRM1-206ENST00000564457 PALLDQ8WX93 1383 aa23.12■■□□□ 1.29
LYRM1-206ENST00000564457 DOT1LQ8TEK3 1739 aa23.11■■□□□ 1.29
LYRM1-206ENST00000564457 SMG6Q86US8 1419 aaKnown RBP23.09■■□□□ 1.29
LYRM1-206ENST00000564457 HSP90AB2PQ58FF8 381 aa23.09■■□□□ 1.29
LYRM1-206ENST00000564457 AK7Q96M32 723 aa23.09■■□□□ 1.29
LYRM1-206ENST00000564457 GGNBP2Q9H3C7 697 aa23.09■■□□□ 1.29
LYRM1-206ENST00000564457 ADCY9O60503 1353 aa23.09■■□□□ 1.29
LYRM1-206ENST00000564457 CYP27B1O15528 508 aa23.08■■□□□ 1.29
LYRM1-206ENST00000564457 INSRP06213 1382 aa23.08■■□□□ 1.29
LYRM1-206ENST00000564457 ZNF526Q8TF50 670 aaPredicted RBP23.07■■□□□ 1.28
LYRM1-206ENST00000564457 IGSF1Q8N6C5 1336 aa23.06■■□□□ 1.28
LYRM1-206ENST00000564457 KIF24Q5T7B8 1368 aa23.05■■□□□ 1.28
LYRM1-206ENST00000564457 TONSLQ96HA7 1378 aa23.05■■□□□ 1.28
LYRM1-206ENST00000564457 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.05■■□□□ 1.28
LYRM1-206ENST00000564457 PIGBQ92521 554 aa23.05■■□□□ 1.28
LYRM1-206ENST00000564457 SSFA2P28290 1259 aa23.04■■□□□ 1.28
LYRM1-206ENST00000564457 NKX1-1Q15270 411 aaPredicted RBP23.04■■□□□ 1.28
LYRM1-206ENST00000564457 AMIGO3Q86WK7 504 aa23.04■■□□□ 1.28
LYRM1-206ENST00000564457 NSD3Q9BZ95 1437 aa23.03■■□□□ 1.28
LYRM1-206ENST00000564457 PHF14O94880 888 aa23.02■■□□□ 1.28
LYRM1-206ENST00000564457 FLT4P35916 1363 aa23.01■■□□□ 1.27
LYRM1-206ENST00000564457 RGPD2P0DJD1 1756 aa23.01■■□□□ 1.27
LYRM1-206ENST00000564457 LOC102724428A0A0B4J2F2 783 aa23■■□□□ 1.27
LYRM1-206ENST00000564457 KIF3CO14782 793 aa23■■□□□ 1.27
LYRM1-206ENST00000564457 SIK1P57059 783 aa23■■□□□ 1.27
LYRM1-206ENST00000564457 TMF1P82094 1093 aa23■■□□□ 1.27
LYRM1-206ENST00000564457 SPG7Q9UQ90 795 aa23■■□□□ 1.27
LYRM1-206ENST00000564457 SMIM5Q71RC9 77 aa22.99■■□□□ 1.27
LYRM1-206ENST00000564457 C5P01031 1676 aa22.99■■□□□ 1.27
LYRM1-206ENST00000564457 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.98■■□□□ 1.27
LYRM1-206ENST00000564457 WWC3Q9ULE0 1092 aa22.98■■□□□ 1.27
LYRM1-206ENST00000564457 LINC00116Q8NCU8 138 aa22.97■■□□□ 1.27
LYRM1-206ENST00000564457 C4BP0C0L5 1744 aa22.95■■□□□ 1.26
LYRM1-206ENST00000564457 CDCA8Q53HL2 280 aa22.95■■□□□ 1.26
LYRM1-206ENST00000564457 TMOD3Q9NYL9 352 aa22.95■■□□□ 1.26
LYRM1-206ENST00000564457 GNPATO15228 680 aa22.94■■□□□ 1.26
LYRM1-206ENST00000564457 ATP6V1AP38606 617 aa22.94■■□□□ 1.26
LYRM1-206ENST00000564457 APLP1P51693 650 aa22.94■■□□□ 1.26
LYRM1-206ENST00000564457 TGFB2P61812 414 aa22.94■■□□□ 1.26
LYRM1-206ENST00000564457 ASAP1Q9ULH1 1129 aa22.93■■□□□ 1.26
LYRM1-206ENST00000564457 EMILIN1Q9Y6C2 1016 aa22.93■■□□□ 1.26
LYRM1-206ENST00000564457 TOMM70O94826 608 aa22.92■■□□□ 1.26
LYRM1-206ENST00000564457 MMP10P09238 476 aa22.92■■□□□ 1.26
LYRM1-206ENST00000564457 ITPK1Q13572 414 aa22.92■■□□□ 1.26
LYRM1-206ENST00000564457 NLGN1Q8N2Q7 840 aa22.92■■□□□ 1.26
LYRM1-206ENST00000564457 TAF1LQ8IZX4 1826 aa22.92■■□□□ 1.26
LYRM1-206ENST00000564457 WASHC2AQ641Q2 1341 aa22.91■■□□□ 1.26
LYRM1-206ENST00000564457 IFNL2Q8IZJ0 200 aa22.91■■□□□ 1.26
LYRM1-206ENST00000564457 PPM1GO15355 546 aaPredicted RBP22.9■■□□□ 1.26
LYRM1-206ENST00000564457 TRAPPC3LQ5T215 181 aa22.9■■□□□ 1.26
LYRM1-206ENST00000564457 CARD14Q9BXL6 1004 aa22.9■■□□□ 1.26
LYRM1-206ENST00000564457 DNAJC5GQ8N7S2 189 aa22.89■■□□□ 1.25
LYRM1-206ENST00000564457 EYA1Q99502 592 aa22.89■■□□□ 1.25
LYRM1-206ENST00000564457 ATG3Q9NT62 314 aa22.89■■□□□ 1.25
LYRM1-206ENST00000564457 NCAPD2Q15021 1401 aa22.89■■□□□ 1.25
LYRM1-206ENST00000564457 PHKG2P15735 406 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms