RNA–Protein interactions for RNA: ENST00000563512.1

NSMCE1-205, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 4

Gene NSMCE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-205ENST00000563512 CCNYL3P0C7X3 344 aa12.44□□□□□ -0.42
NSMCE1-205ENST00000563512 PTPRNQ16849 979 aa12.44□□□□□ -0.42
NSMCE1-205ENST00000563512 PROCA1Q8NCQ7 364 aaPredicted RBP12.44□□□□□ -0.42
NSMCE1-205ENST00000563512 PCMTD1Q96MG8 357 aaPredicted RBP12.44□□□□□ -0.42
NSMCE1-205ENST00000563512 TCOF1Q13428 1488 aaKnown RBP12.44□□□□□ -0.42
NSMCE1-205ENST00000563512 SHANK2Q9UPX8 1470 aa12.44□□□□□ -0.42
NSMCE1-205ENST00000563512 RTEL1-TNFRSF6BF6WH68 1400 aa12.44□□□□□ -0.42
NSMCE1-205ENST00000563512 FAM135AQ9P2D6 1515 aa12.43□□□□□ -0.42
NSMCE1-205ENST00000563512 ZNF598Q86UK7 904 aaKnown RBP12.43□□□□□ -0.42
NSMCE1-205ENST00000563512 HELBQ8NG08 1087 aaPredicted RBP12.43□□□□□ -0.42
NSMCE1-205ENST00000563512 EMID1Q96A84 441 aaPredicted RBP12.43□□□□□ -0.42
NSMCE1-205ENST00000563512 FGD6Q6ZV73 1430 aa12.43□□□□□ -0.42
NSMCE1-205ENST00000563512 KANK4Q5T7N3 995 aaPredicted RBP12.42□□□□□ -0.42
NSMCE1-205ENST00000563512 ZNF697Q5TEC3 545 aa12.42□□□□□ -0.42
NSMCE1-205ENST00000563512 GOPCQ9HD26 462 aa12.42□□□□□ -0.42
NSMCE1-205ENST00000563512 C3P01024 1663 aa12.42□□□□□ -0.42
NSMCE1-205ENST00000563512 ZC3H13Q5T200 1668 aaKnown RBP12.42□□□□□ -0.42
NSMCE1-205ENST00000563512 RNF17Q9BXT8 1623 aaKnown RBP12.41□□□□□ -0.42
NSMCE1-205ENST00000563512 RTL5Q5HYW3 569 aaPredicted RBP12.41□□□□□ -0.42
NSMCE1-205ENST00000563512 PREX1Q8TCU6 1659 aa12.41□□□□□ -0.42
NSMCE1-205ENST00000563512 AFAP1Q8N556 730 aa12.4□□□□□ -0.42
NSMCE1-205ENST00000563512 ZNF777Q9ULD5 760 aaPredicted RBP12.4□□□□□ -0.42
NSMCE1-205ENST00000563512 SPAG9O60271 1321 aaKnown RBP12.39□□□□□ -0.43
NSMCE1-205ENST00000563512 LYPD8Q6UX82 237 aa12.39□□□□□ -0.43
NSMCE1-205ENST00000563512 CLTCQ00610 1675 aaKnown RBP12.38□□□□□ -0.43
NSMCE1-205ENST00000563512 CTHP32929 405 aa12.38□□□□□ -0.43
NSMCE1-205ENST00000563512 TRIM32Q13049 653 aa12.38□□□□□ -0.43
NSMCE1-205ENST00000563512 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.38□□□□□ -0.43
NSMCE1-205ENST00000563512 A2MP01023 1474 aa12.38□□□□□ -0.43
NSMCE1-205ENST00000563512 DEPDC5O75140 1603 aa12.37□□□□□ -0.43
NSMCE1-205ENST00000563512 GFRA3O60609 400 aa12.37□□□□□ -0.43
NSMCE1-205ENST00000563512 EVA1BQ9NVM1 165 aa12.37□□□□□ -0.43
NSMCE1-205ENST00000563512 PDZRN3Q9UPQ7 1066 aa12.37□□□□□ -0.43
NSMCE1-205ENST00000563512 PTPRMP28827 1452 aa12.37□□□□□ -0.43
NSMCE1-205ENST00000563512 HNRNPMP52272 730 aaKnown RBP eCLIP12.36□□□□□ -0.43
NSMCE1-205ENST00000563512 LAPTM4AQ15012 233 aa12.36□□□□□ -0.43
NSMCE1-205ENST00000563512 CFAP65Q6ZU64 1925 aaKnown RBP12.36□□□□□ -0.43
NSMCE1-205ENST00000563512 ZNF644Q9H582 1327 aaPredicted RBP12.36□□□□□ -0.43
NSMCE1-205ENST00000563512 KCNH2Q12809 1159 aa12.35□□□□□ -0.43
NSMCE1-205ENST00000563512 FOXC1Q12948 553 aa12.35□□□□□ -0.43
NSMCE1-205ENST00000563512 DUOX2Q9NRD8 1548 aa12.35□□□□□ -0.43
NSMCE1-205ENST00000563512 ARID4BQ4LE39 1312 aaPredicted RBP12.35□□□□□ -0.43
NSMCE1-205ENST00000563512 CEP152O94986 1710 aa12.34□□□□□ -0.43
NSMCE1-205ENST00000563512 PPP2R2DQ66LE6 453 aa12.34□□□□□ -0.43
NSMCE1-205ENST00000563512 CNTLNQ9NXG0 1405 aa12.34□□□□□ -0.43
NSMCE1-205ENST00000563512 PTCRAQ6ISU1 281 aaPredicted RBP12.33□□□□□ -0.44
NSMCE1-205ENST00000563512 DAPK1P53355 1430 aa12.33□□□□□ -0.44
NSMCE1-205ENST00000563512 ADGRL2O95490 1459 aa12.33□□□□□ -0.44
NSMCE1-205ENST00000563512 ZNF142P52746 1687 aaPredicted RBP12.32□□□□□ -0.44
NSMCE1-205ENST00000563512 PER1O15534 1290 aaPredicted RBP12.32□□□□□ -0.44
NSMCE1-205ENST00000563512 UNC93B1Q9H1C4 597 aa12.32□□□□□ -0.44
NSMCE1-205ENST00000563512 PRDM15P57071 1507 aaPredicted RBP12.32□□□□□ -0.44
NSMCE1-205ENST00000563512 MROH1Q8NDA8 1641 aa12.31□□□□□ -0.44
NSMCE1-205ENST00000563512 AP1G2O75843 785 aa12.31□□□□□ -0.44
NSMCE1-205ENST00000563512 GCC2Q8IWJ2 1684 aa12.31□□□□□ -0.44
NSMCE1-205ENST00000563512 KDM5DQ9BY66 1539 aa12.31□□□□□ -0.44
NSMCE1-205ENST00000563512 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.3□□□□□ -0.44
NSMCE1-205ENST00000563512 ABCC5O15440 1437 aa12.3□□□□□ -0.44
NSMCE1-205ENST00000563512 TNFRSF10AO00220 468 aa12.3□□□□□ -0.44
NSMCE1-205ENST00000563512 CTDSPL2Q05D32 466 aa12.3□□□□□ -0.44
NSMCE1-205ENST00000563512 DHX29Q7Z478 1369 aaKnown RBP12.3□□□□□ -0.44
NSMCE1-205ENST00000563512 CAMSAP1Q5T5Y3 1602 aa12.29□□□□□ -0.44
NSMCE1-205ENST00000563512 ERBINQ96RT1 1412 aa12.29□□□□□ -0.44
NSMCE1-205ENST00000563512 NRG2O14511 850 aaPredicted RBP12.29□□□□□ -0.44
NSMCE1-205ENST00000563512 TSPY4P0CV99 314 aa12.29□□□□□ -0.44
NSMCE1-205ENST00000563512 TSPY10P0CW01 314 aa12.29□□□□□ -0.44
NSMCE1-205ENST00000563512 RFC5P40937 340 aa12.29□□□□□ -0.44
NSMCE1-205ENST00000563512 WNT7BP56706 349 aa12.29□□□□□ -0.44
NSMCE1-205ENST00000563512 MAP10Q9P2G4 905 aa12.29□□□□□ -0.44
NSMCE1-205ENST00000563512 PRR20EP86478 221 aa12.28□□□□□ -0.44
NSMCE1-205ENST00000563512 PRR20CP86479 221 aa12.28□□□□□ -0.44
NSMCE1-205ENST00000563512 PRR20DP86480 221 aa12.28□□□□□ -0.44
NSMCE1-205ENST00000563512 PRR20BP86481 221 aa12.28□□□□□ -0.44
NSMCE1-205ENST00000563512 PRR20AP86496 221 aa12.28□□□□□ -0.44
NSMCE1-205ENST00000563512 MYO3AQ8NEV4 1616 aa12.27□□□□□ -0.44
NSMCE1-205ENST00000563512 GDF9O60383 454 aa12.27□□□□□ -0.45
NSMCE1-205ENST00000563512 F12P00748 615 aaPredicted RBP12.27□□□□□ -0.45
NSMCE1-205ENST00000563512 FBXO31Q5XUX0 539 aaPredicted RBP12.27□□□□□ -0.45
NSMCE1-205ENST00000563512 TRIM67Q6ZTA4 783 aa12.27□□□□□ -0.45
NSMCE1-205ENST00000563512 RRBP1Q9P2E9 1410 aaKnown RBP12.27□□□□□ -0.45
NSMCE1-205ENST00000563512 WNT7AO00755 349 aa12.26□□□□□ -0.45
NSMCE1-205ENST00000563512 LINC01559Q495D7 138 aa12.26□□□□□ -0.45
NSMCE1-205ENST00000563512 PKD2L1Q9P0L9 805 aa12.26□□□□□ -0.45
NSMCE1-205ENST00000563512 UNC13BO14795 1591 aa12.26□□□□□ -0.45
NSMCE1-205ENST00000563512 TMEM259Q4ZIN3 620 aa12.25□□□□□ -0.45
NSMCE1-205ENST00000563512 Q6ZNB5 142 aa12.25□□□□□ -0.45
NSMCE1-205ENST00000563512 CYP4X1Q8N118 509 aa12.25□□□□□ -0.45
NSMCE1-205ENST00000563512 ARMC2Q8NEN0 867 aa12.25□□□□□ -0.45
NSMCE1-205ENST00000563512 BAP1Q92560 729 aa12.25□□□□□ -0.45
NSMCE1-205ENST00000563512 NPATQ14207 1427 aa12.24□□□□□ -0.45
NSMCE1-205ENST00000563512 RC3H1Q5TC82 1133 aaKnown RBP12.24□□□□□ -0.45
NSMCE1-205ENST00000563512 ANKRD30AQ9BXX3 1397 aa12.24□□□□□ -0.45
NSMCE1-205ENST00000563512 KIF15Q9NS87 1388 aa12.24□□□□□ -0.45
NSMCE1-205ENST00000563512 POLR1AO95602 1720 aaPredicted RBP12.23□□□□□ -0.45
NSMCE1-205ENST00000563512 TET3O43151 1660 aa12.23□□□□□ -0.45
NSMCE1-205ENST00000563512 VWDEQ8N2E2 1590 aa12.23□□□□□ -0.45
NSMCE1-205ENST00000563512 LMTK3Q96Q04 1460 aa12.23□□□□□ -0.45
NSMCE1-205ENST00000563512 NCOA1Q15788 1441 aa12.23□□□□□ -0.45
NSMCE1-205ENST00000563512 SKOR1P84550 965 aa12.23□□□□□ -0.45
NSMCE1-205ENST00000563512 EHBP1Q8NDI1 1231 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms