RNA–Protein interactions for RNA: ENST00000563455.1

SMPD3-205, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-205ENST00000563455 RRS1Q15050 365 aaKnown RBP18.04■□□□□ 0.48
SMPD3-205ENST00000563455 FAM182BQ5T319 152 aa18.04■□□□□ 0.48
SMPD3-205ENST00000563455 CDCA7LQ96GN5 454 aa18.04■□□□□ 0.48
SMPD3-205ENST00000563455 BRWD3Q6RI45 1802 aa18.04■□□□□ 0.48
SMPD3-205ENST00000563455 TRIM37O94972 964 aa18.03■□□□□ 0.48
SMPD3-205ENST00000563455 APBA3O96018 575 aa18.03■□□□□ 0.48
SMPD3-205ENST00000563455 PPP4R2Q9NY27 417 aa18.03■□□□□ 0.48
SMPD3-205ENST00000563455 MAP3K19Q56UN5 1328 aa18.02■□□□□ 0.48
SMPD3-205ENST00000563455 ZBTB7CA1YPR0 619 aa18.02■□□□□ 0.48
SMPD3-205ENST00000563455 CDCA7Q9BWT1 371 aaPredicted RBP18.02■□□□□ 0.48
SMPD3-205ENST00000563455 DISP2A7MBM2 1401 aa18.01■□□□□ 0.47
SMPD3-205ENST00000563455 PRKAR2BP31323 418 aa18.01■□□□□ 0.47
SMPD3-205ENST00000563455 NFE2L2Q16236 605 aa18.01■□□□□ 0.47
SMPD3-205ENST00000563455 NBPF14Q5TI25 921 aa18.01■□□□□ 0.47
SMPD3-205ENST00000563455 PIK3C2AO00443 1686 aa18■□□□□ 0.47
SMPD3-205ENST00000563455 RRP1P56182 461 aaKnown RBP18■□□□□ 0.47
SMPD3-205ENST00000563455 RIPK4P57078 832 aa18■□□□□ 0.47
SMPD3-205ENST00000563455 EIF4A2Q14240 407 aaKnown RBP18■□□□□ 0.47
SMPD3-205ENST00000563455 TOM1L2Q6ZVM7 507 aa18■□□□□ 0.47
SMPD3-205ENST00000563455 CRYBG1Q9Y4K1 1723 aa17.99■□□□□ 0.47
SMPD3-205ENST00000563455 ZNF428Q96B54 188 aa17.99■□□□□ 0.47
SMPD3-205ENST00000563455 CAMKK2Q96RR4 588 aa17.99■□□□□ 0.47
SMPD3-205ENST00000563455 CRB1P82279 1406 aa17.98■□□□□ 0.47
SMPD3-205ENST00000563455 PHRF1Q9P1Y6 1649 aaKnown RBP17.98■□□□□ 0.47
SMPD3-205ENST00000563455 PSDA5PKW4 1024 aaPredicted RBP17.98■□□□□ 0.47
SMPD3-205ENST00000563455 EZH2Q15910 746 aaKnown RBP17.98■□□□□ 0.47
SMPD3-205ENST00000563455 IP6K1Q92551 441 aa17.98■□□□□ 0.47
SMPD3-205ENST00000563455 CAMTA1Q9Y6Y1 1673 aa17.98■□□□□ 0.47
SMPD3-205ENST00000563455 THSD7AQ9UPZ6 1657 aa17.97■□□□□ 0.47
SMPD3-205ENST00000563455 NEUROD2Q15784 382 aa17.97■□□□□ 0.47
SMPD3-205ENST00000563455 DDB1Q16531 1140 aa17.97■□□□□ 0.47
SMPD3-205ENST00000563455 KDRP35968 1356 aa17.96■□□□□ 0.47
SMPD3-205ENST00000563455 HOXC9P31274 260 aa17.96■□□□□ 0.47
SMPD3-205ENST00000563455 R3HDM1Q15032 1099 aaKnown RBP17.96■□□□□ 0.47
SMPD3-205ENST00000563455 HSP90AB2PQ58FF8 381 aa17.96■□□□□ 0.47
SMPD3-205ENST00000563455 COL5A2P05997 1499 aaPredicted RBP17.95■□□□□ 0.46
SMPD3-205ENST00000563455 HTATSF1O43719 755 aaKnown RBP17.95■□□□□ 0.46
SMPD3-205ENST00000563455 CSB-PGBD3P0DP91 1061 aa17.95■□□□□ 0.46
SMPD3-205ENST00000563455 FBLN1P23142 703 aa17.95■□□□□ 0.46
SMPD3-205ENST00000563455 ARHGEF25Q86VW2 580 aa17.95■□□□□ 0.46
SMPD3-205ENST00000563455 TRIM35Q9UPQ4 493 aa17.95■□□□□ 0.46
SMPD3-205ENST00000563455 RGPD1P0DJD0 1748 aa17.95■□□□□ 0.46
SMPD3-205ENST00000563455 GNAI1P63096 354 aa17.94■□□□□ 0.46
SMPD3-205ENST00000563455 AAMPQ13685 434 aa17.94■□□□□ 0.46
SMPD3-205ENST00000563455 RRP7AQ9Y3A4 280 aaKnown RBP17.94■□□□□ 0.46
SMPD3-205ENST00000563455 WDR17Q8IZU2 1322 aa17.94■□□□□ 0.46
SMPD3-205ENST00000563455 IGSF1Q8N6C5 1336 aa17.94■□□□□ 0.46
SMPD3-205ENST00000563455 MS4A1P11836 297 aa17.93■□□□□ 0.46
SMPD3-205ENST00000563455 SULT6B1Q6IMI4 303 aa17.93■□□□□ 0.46
SMPD3-205ENST00000563455 GAS2L2Q8NHY3 880 aa17.93■□□□□ 0.46
SMPD3-205ENST00000563455 SLIT3O75094 1523 aa17.93■□□□□ 0.46
SMPD3-205ENST00000563455 PLEKHG2Q9H7P9 1386 aa17.92■□□□□ 0.46
SMPD3-205ENST00000563455 HMOX1P09601 288 aa17.92■□□□□ 0.46
SMPD3-205ENST00000563455 CARD10Q9BWT7 1032 aa17.92■□□□□ 0.46
SMPD3-205ENST00000563455 IFT57Q9NWB7 429 aa17.92■□□□□ 0.46
SMPD3-205ENST00000563455 SENP3-EIF4A1A0A087X0R7 540 aa17.91■□□□□ 0.46
SMPD3-205ENST00000563455 EXOC5O00471 708 aa17.91■□□□□ 0.46
SMPD3-205ENST00000563455 PLSCR1O15162 318 aa17.91■□□□□ 0.46
SMPD3-205ENST00000563455 SRCAPQ6ZRS2 3230 aa17.91■□□□□ 0.46
SMPD3-205ENST00000563455 NFAT5O94916 1531 aa17.9■□□□□ 0.46
SMPD3-205ENST00000563455 AXIN2Q9Y2T1 843 aa17.9■□□□□ 0.46
SMPD3-205ENST00000563455 LMO7Q8WWI1 1683 aa17.9■□□□□ 0.46
SMPD3-205ENST00000563455 OVOS2A0A0G2JMS6 1433 aa17.89■□□□□ 0.46
SMPD3-205ENST00000563455 ABCC6O95255 1503 aa17.89■□□□□ 0.45
SMPD3-205ENST00000563455 SOX12O15370 315 aa17.89■□□□□ 0.45
SMPD3-205ENST00000563455 PDE3AQ14432 1141 aa17.89■□□□□ 0.45
SMPD3-205ENST00000563455 PHACTR3Q96KR7 559 aa17.89■□□□□ 0.45
SMPD3-205ENST00000563455 BCL11BQ9C0K0 894 aaPredicted RBP17.89■□□□□ 0.45
SMPD3-205ENST00000563455 SPINK5Q9NQ38 1064 aaPredicted RBP17.89■□□□□ 0.45
SMPD3-205ENST00000563455 CFAP44Q96MT7 982 aa17.88■□□□□ 0.45
SMPD3-205ENST00000563455 EYA1Q99502 592 aa17.88■□□□□ 0.45
SMPD3-205ENST00000563455 PEAK1Q9H792 1746 aa17.87■□□□□ 0.45
SMPD3-205ENST00000563455 BABAM1Q9NWV8 329 aa17.87■□□□□ 0.45
SMPD3-205ENST00000563455 RTF1Q92541 710 aaKnown RBP17.86■□□□□ 0.45
SMPD3-205ENST00000563455 LRP5O75197 1615 aa17.85■□□□□ 0.45
SMPD3-205ENST00000563455 ALDH1L2Q3SY69 923 aa17.85■□□□□ 0.45
SMPD3-205ENST00000563455 CHMP4AQ9BY43 222 aa17.85■□□□□ 0.45
SMPD3-205ENST00000563455 FANCIQ9NVI1 1328 aa17.85■□□□□ 0.45
SMPD3-205ENST00000563455 ZNF853P0CG23 659 aa17.84■□□□□ 0.45
SMPD3-205ENST00000563455 RARSP54136 660 aaKnown RBP17.84■□□□□ 0.45
SMPD3-205ENST00000563455 AMOTQ4VCS5 1084 aa17.84■□□□□ 0.45
SMPD3-205ENST00000563455 SOS1Q07889 1333 aaPredicted RBP17.83■□□□□ 0.44
SMPD3-205ENST00000563455 DCAF8L1A6NGE4 600 aa17.83■□□□□ 0.44
SMPD3-205ENST00000563455 BRPF1P55201 1214 aaPredicted RBP17.83■□□□□ 0.44
SMPD3-205ENST00000563455 SPON1Q9HCB6 807 aa17.83■□□□□ 0.44
SMPD3-205ENST00000563455 BCL9O00512 1426 aa17.82■□□□□ 0.44
SMPD3-205ENST00000563455 IPO8O15397 1037 aaKnown RBP17.82■□□□□ 0.44
SMPD3-205ENST00000563455 MARCH10Q8NA82 808 aaPredicted RBP17.82■□□□□ 0.44
SMPD3-205ENST00000563455 NLRP2Q9NX02 1062 aa17.82■□□□□ 0.44
SMPD3-205ENST00000563455 IRX6P78412 446 aaPredicted RBP17.81■□□□□ 0.44
SMPD3-205ENST00000563455 AEBP1Q8IUX7 1158 aa17.81■□□□□ 0.44
SMPD3-205ENST00000563455 CCDC136Q96JN2 1154 aa17.81■□□□□ 0.44
SMPD3-205ENST00000563455 PPP1R1BQ9UD71 204 aaPredicted RBP17.81■□□□□ 0.44
SMPD3-205ENST00000563455 GNAT3A8MTJ3 354 aa17.8■□□□□ 0.44
SMPD3-205ENST00000563455 CANXP27824 592 aaKnown RBP17.8■□□□□ 0.44
SMPD3-205ENST00000563455 TNS1Q9HBL0 1735 aaKnown RBP17.8■□□□□ 0.44
SMPD3-205ENST00000563455 PARP4Q9UKK3 1724 aaKnown RBP17.8■□□□□ 0.44
SMPD3-205ENST00000563455 NCAPD2Q15021 1401 aa17.8■□□□□ 0.44
SMPD3-205ENST00000563455 KIF16BQ96L93 1317 aa17.79■□□□□ 0.44
SMPD3-205ENST00000563455 KCNQ2O43526 872 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms