RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 SCARF1Q14162 830 aa8.56□□□□□ -1.04
CNOT1-205ENST00000563283 MEIOBQ8N635 442 aa8.56□□□□□ -1.04
CNOT1-205ENST00000563283 PRXQ9BXM0 1461 aa8.56□□□□□ -1.04
CNOT1-205ENST00000563283 LCE2AQ5TA79 106 aaPredicted RBP8.55□□□□□ -1.04
CNOT1-205ENST00000563283 TREML4Q6UXN2 200 aa8.55□□□□□ -1.04
CNOT1-205ENST00000563283 PURBQ96QR8 312 aaKnown RBP8.55□□□□□ -1.04
CNOT1-205ENST00000563283 KIAA0586Q9BVV6 1533 aa8.54□□□□□ -1.04
CNOT1-205ENST00000563283 RAPGEF2Q9Y4G8 1499 aa8.54□□□□□ -1.04
CNOT1-205ENST00000563283 NBPF20Q3BBV1 942 aa8.54□□□□□ -1.04
CNOT1-205ENST00000563283 INTS6LQ5JSJ4 861 aaKnown RBP8.54□□□□□ -1.04
CNOT1-205ENST00000563283 PPP1R26Q5T8A7 1209 aaPredicted RBP8.54□□□□□ -1.04
CNOT1-205ENST00000563283 MTMR14Q8NCE2 650 aa8.54□□□□□ -1.04
CNOT1-205ENST00000563283 PRG4Q92954 1404 aaPredicted RBP8.54□□□□□ -1.04
CNOT1-205ENST00000563283 DHX9Q08211 1270 aaKnown RBP8.53□□□□□ -1.04
CNOT1-205ENST00000563283 NFX1Q12986 1120 aaKnown RBP8.53□□□□□ -1.04
CNOT1-205ENST00000563283 LINC00528Q8N1L1 170 aa8.53□□□□□ -1.04
CNOT1-205ENST00000563283 PGPEP1Q9NXJ5 209 aa8.53□□□□□ -1.04
CNOT1-205ENST00000563283 ZBBXA8MT70 800 aa8.52□□□□□ -1.05
CNOT1-205ENST00000563283 DZIP3Q86Y13 1208 aaKnown RBP8.52□□□□□ -1.05
CNOT1-205ENST00000563283 ESPNB1AK53 854 aa8.51□□□□□ -1.05
CNOT1-205ENST00000563283 APBB1O00213 710 aa8.51□□□□□ -1.05
CNOT1-205ENST00000563283 TERTO14746 1132 aaKnown RBP8.51□□□□□ -1.05
CNOT1-205ENST00000563283 GPR37L1O60883 481 aa8.51□□□□□ -1.05
CNOT1-205ENST00000563283 WFS1O76024 890 aa8.51□□□□□ -1.05
CNOT1-205ENST00000563283 FBXO45P0C2W1 286 aa8.51□□□□□ -1.05
CNOT1-205ENST00000563283 SNRKQ9NRH2 765 aa8.51□□□□□ -1.05
CNOT1-205ENST00000563283 NDUFB9Q9Y6M9 179 aa8.51□□□□□ -1.05
CNOT1-205ENST00000563283 UPP2O95045 317 aa8.5□□□□□ -1.05
CNOT1-205ENST00000563283 C6orf118Q5T5N4 469 aa8.5□□□□□ -1.05
CNOT1-205ENST00000563283 Q6ZVU0 165 aa8.5□□□□□ -1.05
CNOT1-205ENST00000563283 FAM9AQ8IZU1 332 aaPredicted RBP8.5□□□□□ -1.05
CNOT1-205ENST00000563283 TSEN34Q9BSV6 310 aaKnown RBP8.5□□□□□ -1.05
CNOT1-205ENST00000563283 BMP2P12643 396 aa8.49□□□□□ -1.05
CNOT1-205ENST00000563283 CBLBQ13191 982 aa8.49□□□□□ -1.05
CNOT1-205ENST00000563283 DISP1Q96F81 1524 aa8.49□□□□□ -1.05
CNOT1-205ENST00000563283 IQGAP2Q13576 1575 aa8.48□□□□□ -1.05
CNOT1-205ENST00000563283 NR1H3Q13133 447 aa8.48□□□□□ -1.05
CNOT1-205ENST00000563283 SEPT12Q8IYM1 358 aa8.48□□□□□ -1.05
CNOT1-205ENST00000563283 NXF1Q9UBU9 619 aaKnown RBP8.48□□□□□ -1.05
CNOT1-205ENST00000563283 CTTNBP2Q8WZ74 1663 aa8.47□□□□□ -1.05
CNOT1-205ENST00000563283 NPAS3Q8IXF0 933 aa8.47□□□□□ -1.05
CNOT1-205ENST00000563283 PCDHB9Q9Y5E1 797 aa8.47□□□□□ -1.05
CNOT1-205ENST00000563283 UGGT2Q9NYU1 1516 aa8.47□□□□□ -1.05
CNOT1-205ENST00000563283 SOS2Q07890 1332 aaPredicted RBP8.47□□□□□ -1.05
CNOT1-205ENST00000563283 SOBPA7XYQ1 873 aa8.46□□□□□ -1.06
CNOT1-205ENST00000563283 ERVH48-1M5A8F1 160 aa8.46□□□□□ -1.06
CNOT1-205ENST00000563283 LCE2CQ5TA81 110 aa8.46□□□□□ -1.06
CNOT1-205ENST00000563283 TMPRSS4Q9NRS4 437 aa8.46□□□□□ -1.06
CNOT1-205ENST00000563283 EEA1Q15075 1411 aa8.46□□□□□ -1.06
CNOT1-205ENST00000563283 RAB15P59190 212 aa8.45□□□□□ -1.06
CNOT1-205ENST00000563283 MCCD1P59942 119 aaPredicted RBP8.45□□□□□ -1.06
CNOT1-205ENST00000563283 ZNF784Q8NCA9 323 aaPredicted RBP8.45□□□□□ -1.06
CNOT1-205ENST00000563283 ADCY10Q96PN6 1610 aa8.44□□□□□ -1.06
CNOT1-205ENST00000563283 SPINT1O43278 529 aa8.44□□□□□ -1.06
CNOT1-205ENST00000563283 MAN1A2O60476 641 aa8.44□□□□□ -1.06
CNOT1-205ENST00000563283 SLC16A10Q8TF71 515 aa8.44□□□□□ -1.06
CNOT1-205ENST00000563283 ZNF592Q92610 1267 aa8.44□□□□□ -1.06
CNOT1-205ENST00000563283 ZNF330Q9Y3S2 320 aaPredicted RBP8.44□□□□□ -1.06
CNOT1-205ENST00000563283 KIF21BO75037 1637 aa8.43□□□□□ -1.06
CNOT1-205ENST00000563283 H3BM21 787 aa8.43□□□□□ -1.06
CNOT1-205ENST00000563283 LILRA1O75019 489 aa8.43□□□□□ -1.06
CNOT1-205ENST00000563283 GIGYF1O75420 1035 aaPredicted RBP8.43□□□□□ -1.06
CNOT1-205ENST00000563283 DNMT3LQ9UJW3 386 aa8.43□□□□□ -1.06
CNOT1-205ENST00000563283 WIPF1O43516 503 aa8.42□□□□□ -1.06
CNOT1-205ENST00000563283 ADH1AP07327 375 aa8.42□□□□□ -1.06
CNOT1-205ENST00000563283 CCDC125Q86Z20 511 aa8.42□□□□□ -1.06
CNOT1-205ENST00000563283 TRIM52Q96A61 297 aa8.42□□□□□ -1.06
CNOT1-205ENST00000563283 AGBL1Q96MI9 1066 aa8.42□□□□□ -1.06
CNOT1-205ENST00000563283 TBC1D2BQ9UPU7 963 aa8.42□□□□□ -1.06
CNOT1-205ENST00000563283 KIAA0556O60303 1618 aa8.42□□□□□ -1.06
CNOT1-205ENST00000563283 PTPRGP23470 1445 aa8.41□□□□□ -1.06
CNOT1-205ENST00000563283 TNIKQ9UKE5 1360 aa8.41□□□□□ -1.06
CNOT1-205ENST00000563283 TTLL8A6PVC2 850 aa8.41□□□□□ -1.06
CNOT1-205ENST00000563283 PRM3Q9NNZ6 103 aa8.41□□□□□ -1.06
CNOT1-205ENST00000563283 ADD1P35611 737 aaKnown RBP8.4□□□□□ -1.06
CNOT1-205ENST00000563283 VEGFBP49765 207 aa8.4□□□□□ -1.06
CNOT1-205ENST00000563283 RELBQ01201 579 aa8.4□□□□□ -1.06
CNOT1-205ENST00000563283 RNF20Q5VTR2 975 aa8.4□□□□□ -1.06
CNOT1-205ENST00000563283 SAMD9Q5K651 1589 aa8.39□□□□□ -1.07
CNOT1-205ENST00000563283 CARMIL2Q6F5E8 1435 aa8.39□□□□□ -1.07
CNOT1-205ENST00000563283 TTBK1Q5TCY1 1321 aaPredicted RBP8.39□□□□□ -1.07
CNOT1-205ENST00000563283 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.39□□□□□ -1.07
CNOT1-205ENST00000563283 IRF7Q92985 503 aa8.39□□□□□ -1.07
CNOT1-205ENST00000563283 CYLDQ9NQC7 956 aa8.39□□□□□ -1.07
CNOT1-205ENST00000563283 IRF5Q13568 498 aa8.38□□□□□ -1.07
CNOT1-205ENST00000563283 MCM6Q14566 821 aa8.38□□□□□ -1.07
CNOT1-205ENST00000563283 KDF1Q8NAX2 398 aaPredicted RBP8.38□□□□□ -1.07
CNOT1-205ENST00000563283 PTGIRP43119 386 aa8.37□□□□□ -1.07
CNOT1-205ENST00000563283 CTSOP43234 321 aaPredicted RBP8.37□□□□□ -1.07
CNOT1-205ENST00000563283 ERVK-9P63128 1117 aa8.37□□□□□ -1.07
CNOT1-205ENST00000563283 INSM2Q96T92 566 aaPredicted RBP8.37□□□□□ -1.07
CNOT1-205ENST00000563283 KIF13AQ9H1H9 1805 aa8.37□□□□□ -1.07
CNOT1-205ENST00000563283 UHRF1BP1LA0JNW5 1464 aa8.37□□□□□ -1.07
CNOT1-205ENST00000563283 PLB1Q6P1J6 1458 aa8.37□□□□□ -1.07
CNOT1-205ENST00000563283 ABCA8O94911 1581 aa8.36□□□□□ -1.07
CNOT1-205ENST00000563283 ERBB4Q15303 1308 aa8.36□□□□□ -1.07
CNOT1-205ENST00000563283 FIGNL2A6NMB9 653 aa8.36□□□□□ -1.07
CNOT1-205ENST00000563283 PPFIA3O75145 1194 aa8.36□□□□□ -1.07
CNOT1-205ENST00000563283 VSIG8P0DPA2 414 aa8.36□□□□□ -1.07
CNOT1-205ENST00000563283 ZNF395Q9H8N7 513 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms