RNA–Protein interactions for RNA: ENST00000562882.5

CDH11-205, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-205ENST00000562882 MYT1Q01538 1121 aa17■□□□□ 0.31
CDH11-205ENST00000562882 DDB1Q16531 1140 aa17■□□□□ 0.31
CDH11-205ENST00000562882 MIER1Q8N108 512 aa17■□□□□ 0.31
CDH11-205ENST00000562882 MRS2Q9HD23 443 aa17■□□□□ 0.31
CDH11-205ENST00000562882 ZCRB1Q8TBF4 217 aaKnown RBP16.99■□□□□ 0.31
CDH11-205ENST00000562882 PNISRQ8TF01 805 aaKnown RBP16.99■□□□□ 0.31
CDH11-205ENST00000562882 PNNQ9H307 717 aaKnown RBP16.99■□□□□ 0.31
CDH11-205ENST00000562882 OVOS2A0A0G2JMS6 1433 aa16.98■□□□□ 0.31
CDH11-205ENST00000562882 MEGF6O75095 1541 aa16.98■□□□□ 0.31
CDH11-205ENST00000562882 PDE3BQ13370 1112 aa16.98■□□□□ 0.31
CDH11-205ENST00000562882 WDR43Q15061 677 aaKnown RBP eCLIP16.98■□□□□ 0.31
CDH11-205ENST00000562882 AMOTQ4VCS5 1084 aa16.98■□□□□ 0.31
CDH11-205ENST00000562882 RSPH6AQ9H0K4 717 aa16.98■□□□□ 0.31
CDH11-205ENST00000562882 PARP4Q9UKK3 1724 aaKnown RBP16.98■□□□□ 0.31
CDH11-205ENST00000562882 BRWD3Q6RI45 1802 aa16.98■□□□□ 0.31
CDH11-205ENST00000562882 WNK3Q9BYP7 1800 aa16.98■□□□□ 0.31
CDH11-205ENST00000562882 ADAMTS8Q9UP79 889 aa16.97■□□□□ 0.31
CDH11-205ENST00000562882 SPG7Q9UQ90 795 aa16.97■□□□□ 0.31
CDH11-205ENST00000562882 PLEKHO1Q53GL0 409 aaPredicted RBP16.96■□□□□ 0.31
CDH11-205ENST00000562882 KRT27Q7Z3Y8 459 aa16.96■□□□□ 0.31
CDH11-205ENST00000562882 PRKAR2BP31323 418 aa16.95■□□□□ 0.3
CDH11-205ENST00000562882 PLEKHF1Q96S99 279 aa16.95■□□□□ 0.3
CDH11-205ENST00000562882 TNS2Q63HR2 1409 aa16.94■□□□□ 0.3
CDH11-205ENST00000562882 LRRC37A3O60309 1634 aa16.93■□□□□ 0.3
CDH11-205ENST00000562882 MARCH10Q8NA82 808 aaPredicted RBP16.93■□□□□ 0.3
CDH11-205ENST00000562882 DDX54Q8TDD1 881 aaKnown RBP16.93■□□□□ 0.3
CDH11-205ENST00000562882 PHACTR3Q96KR7 559 aa16.93■□□□□ 0.3
CDH11-205ENST00000562882 PCDH11XQ9BZA7 1347 aa16.93■□□□□ 0.3
CDH11-205ENST00000562882 PCDH11YQ9BZA8 1340 aa16.93■□□□□ 0.3
CDH11-205ENST00000562882 NEFMP07197 916 aa16.92■□□□□ 0.3
CDH11-205ENST00000562882 PKD1L3Q7Z443 1732 aa16.91■□□□□ 0.3
CDH11-205ENST00000562882 BCL9O00512 1426 aa16.91■□□□□ 0.3
CDH11-205ENST00000562882 CYP27B1O15528 508 aa16.91■□□□□ 0.3
CDH11-205ENST00000562882 MTHFSDQ2M296 383 aaKnown RBP16.91■□□□□ 0.3
CDH11-205ENST00000562882 IFNL2Q8IZJ0 200 aa16.91■□□□□ 0.3
CDH11-205ENST00000562882 UPF1Q92900 1129 aaKnown RBP eCLIP16.91■□□□□ 0.3
CDH11-205ENST00000562882 NKX1-1Q15270 411 aaPredicted RBP16.9■□□□□ 0.3
CDH11-205ENST00000562882 FAM196AQ6ZSG2 479 aa16.9■□□□□ 0.3
CDH11-205ENST00000562882 GAS2L2Q8NHY3 880 aa16.9■□□□□ 0.3
CDH11-205ENST00000562882 RUNDC1Q96C34 613 aa16.9■□□□□ 0.3
CDH11-205ENST00000562882 PHKG2P15735 406 aa16.89■□□□□ 0.29
CDH11-205ENST00000562882 ZNF530Q6P9A1 599 aaPredicted RBP16.89■□□□□ 0.29
CDH11-205ENST00000562882 HSP90AB1P08238 724 aaKnown RBP16.88■□□□□ 0.29
CDH11-205ENST00000562882 AKAP4Q5JQC9 854 aa16.88■□□□□ 0.29
CDH11-205ENST00000562882 C1orf141Q5JVX7 400 aa16.88■□□□□ 0.29
CDH11-205ENST00000562882 MAPK8IP3Q9UPT6 1336 aa16.88■□□□□ 0.29
CDH11-205ENST00000562882 SHANK3Q9BYB0 1731 aa16.87■□□□□ 0.29
CDH11-205ENST00000562882 FAM182BQ5T319 152 aa16.87■□□□□ 0.29
CDH11-205ENST00000562882 FAM9BQ8IZU0 186 aa16.87■□□□□ 0.29
CDH11-205ENST00000562882 CCDC146Q8IYE0 955 aa16.86■□□□□ 0.29
CDH11-205ENST00000562882 DCAF5Q96JK2 942 aa16.86■□□□□ 0.29
CDH11-205ENST00000562882 GNAT3A8MTJ3 354 aa16.85■□□□□ 0.29
CDH11-205ENST00000562882 NFE2L2Q16236 605 aa16.85■□□□□ 0.29
CDH11-205ENST00000562882 HTATSF1O43719 755 aaKnown RBP16.84■□□□□ 0.29
CDH11-205ENST00000562882 TMPOP42166 694 aaKnown RBP16.83■□□□□ 0.28
CDH11-205ENST00000562882 MAP3K5Q99683 1374 aa16.82■□□□□ 0.28
CDH11-205ENST00000562882 ERVV-2B6SEH9 535 aa16.82■□□□□ 0.28
CDH11-205ENST00000562882 MPRIPQ6WCQ1 1025 aa16.82■□□□□ 0.28
CDH11-205ENST00000562882 APAF1O14727 1248 aa16.81■□□□□ 0.28
CDH11-205ENST00000562882 RIPK4P57078 832 aa16.81■□□□□ 0.28
CDH11-205ENST00000562882 RTF1Q92541 710 aaKnown RBP16.81■□□□□ 0.28
CDH11-205ENST00000562882 BCL11BQ9C0K0 894 aaPredicted RBP16.81■□□□□ 0.28
CDH11-205ENST00000562882 PRIM1P49642 420 aaKnown RBP16.8■□□□□ 0.28
CDH11-205ENST00000562882 NCBP3Q53F19 620 aaKnown RBP16.8■□□□□ 0.28
CDH11-205ENST00000562882 CCDC125Q86Z20 511 aa16.8■□□□□ 0.28
CDH11-205ENST00000562882 IL17REQ8NFR9 667 aa16.8■□□□□ 0.28
CDH11-205ENST00000562882 LGR6Q9HBX8 967 aa16.8■□□□□ 0.28
CDH11-205ENST00000562882 RNMTO43148 476 aaKnown RBP16.79■□□□□ 0.28
CDH11-205ENST00000562882 KCNQ2O43526 872 aa16.79■□□□□ 0.28
CDH11-205ENST00000562882 ACSBG1Q96GR2 724 aa16.79■□□□□ 0.28
CDH11-205ENST00000562882 KDM6AO15550 1401 aaPredicted RBP16.79■□□□□ 0.28
CDH11-205ENST00000562882 TRIM37O94972 964 aa16.78■□□□□ 0.28
CDH11-205ENST00000562882 LMOD3Q0VAK6 560 aa16.78■□□□□ 0.28
CDH11-205ENST00000562882 NEUROD2Q15784 382 aa16.78■□□□□ 0.28
CDH11-205ENST00000562882 TNS1Q9HBL0 1735 aaKnown RBP16.78■□□□□ 0.28
CDH11-205ENST00000562882 CEMIPQ8WUJ3 1361 aa16.77■□□□□ 0.28
CDH11-205ENST00000562882 SBF2Q86WG5 1849 aa16.77■□□□□ 0.28
CDH11-205ENST00000562882 NGEFQ8N5V2 710 aa16.77■□□□□ 0.28
CDH11-205ENST00000562882 SYTL4Q96C24 671 aaPredicted RBP16.77■□□□□ 0.28
CDH11-205ENST00000562882 RRP7AQ9Y3A4 280 aaKnown RBP16.77■□□□□ 0.28
CDH11-205ENST00000562882 ADAMTS7Q9UKP4 1686 aa16.76■□□□□ 0.27
CDH11-205ENST00000562882 CABP4P57796 275 aa16.76■□□□□ 0.27
CDH11-205ENST00000562882 MCM10Q7L590 875 aa16.76■□□□□ 0.27
CDH11-205ENST00000562882 NFATC2IPQ8NCF5 419 aa16.76■□□□□ 0.27
CDH11-205ENST00000562882 TMOD3Q9NYL9 352 aa16.76■□□□□ 0.27
CDH11-205ENST00000562882 TRIM35Q9UPQ4 493 aa16.76■□□□□ 0.27
CDH11-205ENST00000562882 SCN11AQ9UI33 1791 aa16.75■□□□□ 0.27
CDH11-205ENST00000562882 DLG5Q8TDM6 1919 aa16.75■□□□□ 0.27
CDH11-205ENST00000562882 CCDC27Q2M243 656 aa16.75■□□□□ 0.27
CDH11-205ENST00000562882 PTF1AQ7RTS3 328 aa16.75■□□□□ 0.27
CDH11-205ENST00000562882 PIGBQ92521 554 aa16.75■□□□□ 0.27
CDH11-205ENST00000562882 SLC52A2Q9HAB3 445 aa16.75■□□□□ 0.27
CDH11-205ENST00000562882 TEFQ10587 303 aa16.74■□□□□ 0.27
CDH11-205ENST00000562882 DCTN1Q14203 1278 aa16.74■□□□□ 0.27
CDH11-205ENST00000562882 NHSQ6T4R5 1651 aa16.74■□□□□ 0.27
CDH11-205ENST00000562882 DOT1LQ8TEK3 1739 aa16.73■□□□□ 0.27
CDH11-205ENST00000562882 TOGARAM1Q9Y4F4 1720 aa16.73■□□□□ 0.27
CDH11-205ENST00000562882 SF3B2Q13435 895 aaKnown RBP16.73■□□□□ 0.27
CDH11-205ENST00000562882 ITGB4P16144 1822 aa16.73■□□□□ 0.27
CDH11-205ENST00000562882 PLSCR1O15162 318 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms