RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 GPC1P35052 558 aa5.91□□□□□ -1.46
CHD9-207ENST00000562806 PTGIRP43119 386 aa5.91□□□□□ -1.46
CHD9-207ENST00000562806 OXLD1Q5BKU9 147 aa5.91□□□□□ -1.46
CHD9-207ENST00000562806 PPP1R12CQ9BZL4 782 aa5.91□□□□□ -1.46
CHD9-207ENST00000562806 ADD1P35611 737 aaKnown RBP5.9□□□□□ -1.46
CHD9-207ENST00000562806 CBLBQ13191 982 aa5.9□□□□□ -1.46
CHD9-207ENST00000562806 TRIM47Q96LD4 638 aa5.9□□□□□ -1.46
CHD9-207ENST00000562806 NLRP3Q96P20 1036 aa5.9□□□□□ -1.46
CHD9-207ENST00000562806 TFIP11Q9UBB9 837 aaKnown RBP5.9□□□□□ -1.46
CHD9-207ENST00000562806 USP17L3A6NCW0 530 aa5.89□□□□□ -1.47
CHD9-207ENST00000562806 USP17L4A6NCW7 530 aa5.89□□□□□ -1.47
CHD9-207ENST00000562806 PALM3A6NDB9 673 aaPredicted RBP5.89□□□□□ -1.47
CHD9-207ENST00000562806 NCOA4Q13772 614 aa5.89□□□□□ -1.47
CHD9-207ENST00000562806 USP17L2Q6R6M4 530 aa5.89□□□□□ -1.47
CHD9-207ENST00000562806 TBC1D9Q6ZT07 1266 aa5.89□□□□□ -1.47
CHD9-207ENST00000562806 USP17L1Q7RTZ2 530 aa5.89□□□□□ -1.47
CHD9-207ENST00000562806 TRIM46Q7Z4K8 759 aa5.89□□□□□ -1.47
CHD9-207ENST00000562806 ZFP42Q96MM3 310 aa5.89□□□□□ -1.47
CHD9-207ENST00000562806 UCN2Q96RP3 112 aa5.89□□□□□ -1.47
CHD9-207ENST00000562806 OSBPL3Q9H4L5 887 aa5.89□□□□□ -1.47
CHD9-207ENST00000562806 RBM19Q9Y4C8 960 aaKnown RBP5.89□□□□□ -1.47
CHD9-207ENST00000562806 C11orf95C9JLR9 678 aaPredicted RBP5.88□□□□□ -1.47
CHD9-207ENST00000562806 PIK3CDO00329 1044 aa5.88□□□□□ -1.47
CHD9-207ENST00000562806 WASLO00401 505 aaPredicted RBP5.88□□□□□ -1.47
CHD9-207ENST00000562806 GTF2E1P29083 439 aaPredicted RBP5.88□□□□□ -1.47
CHD9-207ENST00000562806 SCTRP47872 440 aa5.88□□□□□ -1.47
CHD9-207ENST00000562806 RELBQ01201 579 aa5.88□□□□□ -1.47
CHD9-207ENST00000562806 CLN3Q13286 438 aa5.88□□□□□ -1.47
CHD9-207ENST00000562806 PURBQ96QR8 312 aaKnown RBP5.88□□□□□ -1.47
CHD9-207ENST00000562806 CDCA7Q9BWT1 371 aaPredicted RBP5.88□□□□□ -1.47
CHD9-207ENST00000562806 MAFBQ9Y5Q3 323 aaPredicted RBP5.88□□□□□ -1.47
CHD9-207ENST00000562806 TTLL8A6PVC2 850 aa5.87□□□□□ -1.47
CHD9-207ENST00000562806 BACH1O14867 736 aa5.87□□□□□ -1.47
CHD9-207ENST00000562806 BMP1P13497 986 aa5.87□□□□□ -1.47
CHD9-207ENST00000562806 RNF144AP50876 292 aaPredicted RBP5.87□□□□□ -1.47
CHD9-207ENST00000562806 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.87□□□□□ -1.47
CHD9-207ENST00000562806 TSGA10IPQ3SY00 556 aa5.87□□□□□ -1.47
CHD9-207ENST00000562806 C6orf118Q5T5N4 469 aa5.87□□□□□ -1.47
CHD9-207ENST00000562806 ZNF787Q6DD87 383 aa5.87□□□□□ -1.47
CHD9-207ENST00000562806 LARGE2Q8N3Y3 721 aa5.87□□□□□ -1.47
CHD9-207ENST00000562806 ESYT1Q9BSJ8 1104 aa5.87□□□□□ -1.47
CHD9-207ENST00000562806 VRTNQ9H8Y1 702 aa5.87□□□□□ -1.47
CHD9-207ENST00000562806 GMPR2Q9P2T1 348 aaKnown RBP5.87□□□□□ -1.47
CHD9-207ENST00000562806 MKRN1Q9UHC7 482 aaKnown RBP5.87□□□□□ -1.47
CHD9-207ENST00000562806 SOS2Q07890 1332 aaPredicted RBP5.86□□□□□ -1.47
CHD9-207ENST00000562806 A0A1W2PRU2 124 aa5.86□□□□□ -1.47
CHD9-207ENST00000562806 LCE2BO14633 110 aa5.86□□□□□ -1.47
CHD9-207ENST00000562806 MAN1A2O60476 641 aa5.86□□□□□ -1.47
CHD9-207ENST00000562806 GTF2IP78347 998 aa5.86□□□□□ -1.47
CHD9-207ENST00000562806 LARP1Q6PKG0 1096 aaKnown RBP5.86□□□□□ -1.47
CHD9-207ENST00000562806 XAGE2Q96GT9 111 aa5.86□□□□□ -1.47
CHD9-207ENST00000562806 AGBL1Q96MI9 1066 aa5.86□□□□□ -1.47
CHD9-207ENST00000562806 POLMQ9NP87 494 aaPredicted RBP5.86□□□□□ -1.47
CHD9-207ENST00000562806 DACH1Q9UI36 760 aa5.86□□□□□ -1.47
CHD9-207ENST00000562806 MEN1O00255 615 aa5.85□□□□□ -1.47
CHD9-207ENST00000562806 LMOD1P29536 600 aaPredicted RBP5.85□□□□□ -1.47
CHD9-207ENST00000562806 PSME1Q06323 249 aa5.85□□□□□ -1.47
CHD9-207ENST00000562806 WDR44Q5JSH3 913 aa5.85□□□□□ -1.47
CHD9-207ENST00000562806 KDF1Q8NAX2 398 aaPredicted RBP5.85□□□□□ -1.47
CHD9-207ENST00000562806 ZNF395Q9H8N7 513 aaPredicted RBP5.85□□□□□ -1.47
CHD9-207ENST00000562806 DNAAF2Q9NVR5 837 aaKnown RBP5.85□□□□□ -1.47
CHD9-207ENST00000562806 TIMELESSQ9UNS1 1208 aa5.85□□□□□ -1.47
CHD9-207ENST00000562806 FAM196BA6NMK8 535 aa5.84□□□□□ -1.47
CHD9-207ENST00000562806 M0R2N6 131 aa5.84□□□□□ -1.47
CHD9-207ENST00000562806 INHAP05111 366 aa5.84□□□□□ -1.47
CHD9-207ENST00000562806 SLC27A3Q5K4L6 730 aa5.84□□□□□ -1.47
CHD9-207ENST00000562806 LYSMD3Q7Z3D4 306 aa5.84□□□□□ -1.47
CHD9-207ENST00000562806 NPAS3Q8IXF0 933 aa5.84□□□□□ -1.47
CHD9-207ENST00000562806 DEPDC4Q8N2C3 294 aa5.84□□□□□ -1.47
CHD9-207ENST00000562806 NBPF15Q8N660 670 aa5.84□□□□□ -1.47
CHD9-207ENST00000562806 CNKSR1Q969H4 720 aa5.84□□□□□ -1.47
CHD9-207ENST00000562806 INSM2Q96T92 566 aaPredicted RBP5.84□□□□□ -1.47
CHD9-207ENST00000562806 ARHGEF10LQ9HCE6 1279 aa5.84□□□□□ -1.47
CHD9-207ENST00000562806 PCDHGA11Q9Y5H2 935 aa5.84□□□□□ -1.47
CHD9-207ENST00000562806 PPP1R15AO75807 674 aaPredicted RBP5.83□□□□□ -1.48
CHD9-207ENST00000562806 RASA1P20936 1047 aa5.83□□□□□ -1.48
CHD9-207ENST00000562806 GDF10P55107 478 aa5.83□□□□□ -1.48
CHD9-207ENST00000562806 CFAP70Q5T0N1 1121 aa5.83□□□□□ -1.48
CHD9-207ENST00000562806 SIX5Q8N196 739 aa5.83□□□□□ -1.48
CHD9-207ENST00000562806 OGFOD1Q8N543 542 aa5.83□□□□□ -1.48
CHD9-207ENST00000562806 SLC4A9Q96Q91 983 aa5.83□□□□□ -1.48
CHD9-207ENST00000562806 CTSOP43234 321 aaPredicted RBP5.82□□□□□ -1.48
CHD9-207ENST00000562806 GNASQ5JWF2 1037 aa5.82□□□□□ -1.48
CHD9-207ENST00000562806 KANK4Q5T7N3 995 aaPredicted RBP5.82□□□□□ -1.48
CHD9-207ENST00000562806 CCDC102BQ68D86 513 aa5.82□□□□□ -1.48
CHD9-207ENST00000562806 RNF217Q8TC41 542 aa5.82□□□□□ -1.48
CHD9-207ENST00000562806 PBXIP1Q96AQ6 731 aa5.82□□□□□ -1.48
CHD9-207ENST00000562806 ZSCAN10Q96SZ4 725 aaPredicted RBP5.82□□□□□ -1.48
CHD9-207ENST00000562806 GRIP2Q9C0E4 1043 aa5.82□□□□□ -1.48
CHD9-207ENST00000562806 ARID3CA6NKF2 412 aa5.81□□□□□ -1.48
CHD9-207ENST00000562806 SPATA31C2B4DYI2 1134 aa5.81□□□□□ -1.48
CHD9-207ENST00000562806 IL2RAP01589 272 aa5.81□□□□□ -1.48
CHD9-207ENST00000562806 RFX1P22670 979 aa5.81□□□□□ -1.48
CHD9-207ENST00000562806 SCNN1DP51172 638 aa5.81□□□□□ -1.48
CHD9-207ENST00000562806 SMTNP53814 917 aa5.81□□□□□ -1.48
CHD9-207ENST00000562806 SEC13P55735 322 aa5.81□□□□□ -1.48
CHD9-207ENST00000562806 CENPCQ03188 943 aa5.81□□□□□ -1.48
CHD9-207ENST00000562806 ELOAQ14241 798 aaKnown RBP5.81□□□□□ -1.48
CHD9-207ENST00000562806 TLR1Q15399 786 aa5.81□□□□□ -1.48
CHD9-207ENST00000562806 ETNK1Q9HBU6 452 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms