RNA–Protein interactions for RNA: ENST00000562173.1

UBR1-203, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-203ENST00000562173 PCF11O94913 1555 aaKnown RBP9.54□□□□□ -0.88
UBR1-203ENST00000562173 ZBBXA8MT70 800 aa9.54□□□□□ -0.88
UBR1-203ENST00000562173 RAPGEF3O95398 923 aa9.54□□□□□ -0.88
UBR1-203ENST00000562173 NR1H3Q13133 447 aa9.54□□□□□ -0.88
UBR1-203ENST00000562173 IRF5Q13568 498 aa9.54□□□□□ -0.88
UBR1-203ENST00000562173 SH3RF1Q7Z6J0 888 aa9.54□□□□□ -0.88
UBR1-203ENST00000562173 FNBP4Q8N3X1 1017 aaPredicted RBP9.54□□□□□ -0.88
UBR1-203ENST00000562173 ZNF330Q9Y3S2 320 aaPredicted RBP9.54□□□□□ -0.88
UBR1-203ENST00000562173 SOX11P35716 441 aa9.53□□□□□ -0.88
UBR1-203ENST00000562173 BAP1Q92560 729 aa9.53□□□□□ -0.88
UBR1-203ENST00000562173 MAGI3Q5TCQ9 1506 aa9.52□□□□□ -0.88
UBR1-203ENST00000562173 WNT7AO00755 349 aa9.52□□□□□ -0.89
UBR1-203ENST00000562173 SH3BP2P78314 561 aa9.52□□□□□ -0.89
UBR1-203ENST00000562173 LINC01559Q495D7 138 aa9.52□□□□□ -0.89
UBR1-203ENST00000562173 FBXO45P0C2W1 286 aa9.51□□□□□ -0.89
UBR1-203ENST00000562173 MCCD1P59942 119 aaPredicted RBP9.51□□□□□ -0.89
UBR1-203ENST00000562173 SKOR1P84550 965 aa9.51□□□□□ -0.89
UBR1-203ENST00000562173 ARHGAP9Q9BRR9 750 aa9.51□□□□□ -0.89
UBR1-203ENST00000562173 C1QTNF2Q9BXJ5 285 aa9.51□□□□□ -0.89
UBR1-203ENST00000562173 TRAK2O60296 914 aa9.5□□□□□ -0.89
UBR1-203ENST00000562173 VARSP26640 1264 aaKnown RBP9.5□□□□□ -0.89
UBR1-203ENST00000562173 TRMT44Q8IYL2 757 aaKnown RBP9.5□□□□□ -0.89
UBR1-203ENST00000562173 CYP4X1Q8N118 509 aa9.49□□□□□ -0.89
UBR1-203ENST00000562173 MRGPRX2Q96LB1 330 aa9.49□□□□□ -0.89
UBR1-203ENST00000562173 CDV3Q9UKY7 258 aaKnown RBP9.49□□□□□ -0.89
UBR1-203ENST00000562173 STRCQ7RTU9 1775 aa9.49□□□□□ -0.89
UBR1-203ENST00000562173 RICTORQ6R327 1708 aa9.48□□□□□ -0.89
UBR1-203ENST00000562173 ST8SIA5O15466 376 aa9.48□□□□□ -0.89
UBR1-203ENST00000562173 EIF4G2P78344 907 aaKnown RBP eCLIP9.48□□□□□ -0.89
UBR1-203ENST00000562173 AGERQ15109 404 aa9.48□□□□□ -0.89
UBR1-203ENST00000562173 DISP3Q9P2K9 1392 aa9.48□□□□□ -0.89
UBR1-203ENST00000562173 ABCA9Q8IUA7 1624 aa9.47□□□□□ -0.89
UBR1-203ENST00000562173 AVPP01185 164 aa9.47□□□□□ -0.89
UBR1-203ENST00000562173 ZBTB33Q86T24 672 aa9.47□□□□□ -0.89
UBR1-203ENST00000562173 MPNDQ8N594 471 aa9.47□□□□□ -0.89
UBR1-203ENST00000562173 EHBP1Q8NDI1 1231 aa9.47□□□□□ -0.89
UBR1-203ENST00000562173 FAM174AQ8TBP5 190 aa9.47□□□□□ -0.89
UBR1-203ENST00000562173 ADAM32Q8TC27 787 aa9.47□□□□□ -0.89
UBR1-203ENST00000562173 FOXJ1Q92949 421 aa9.47□□□□□ -0.89
UBR1-203ENST00000562173 OCSTAMPQ9BR26 566 aa9.47□□□□□ -0.89
UBR1-203ENST00000562173 AAASQ9NRG9 546 aa9.47□□□□□ -0.89
UBR1-203ENST00000562173 MAP4K5Q9Y4K4 846 aa9.47□□□□□ -0.89
UBR1-203ENST00000562173 FER1L4A9Z1Z3 1794 aa9.47□□□□□ -0.89
UBR1-203ENST00000562173 ATP10BO94823 1461 aa9.47□□□□□ -0.89
UBR1-203ENST00000562173 RAPGEF2Q9Y4G8 1499 aa9.47□□□□□ -0.89
UBR1-203ENST00000562173 ARAP3Q8WWN8 1544 aa9.46□□□□□ -0.89
UBR1-203ENST00000562173 ERFEQ4G0M1 354 aa9.46□□□□□ -0.9
UBR1-203ENST00000562173 RC3H1Q5TC82 1133 aaKnown RBP9.46□□□□□ -0.9
UBR1-203ENST00000562173 SLC10A4Q96EP9 437 aa9.46□□□□□ -0.9
UBR1-203ENST00000562173 MAGEB6P1A0A0J9YX57 407 aa9.45□□□□□ -0.9
UBR1-203ENST00000562173 SMPD1P17405 629 aa9.45□□□□□ -0.9
UBR1-203ENST00000562173 MLECQ14165 292 aa9.45□□□□□ -0.9
UBR1-203ENST00000562173 C4orf48Q5BLP8 95 aa9.45□□□□□ -0.9
UBR1-203ENST00000562173 ZNF787Q6DD87 383 aa9.45□□□□□ -0.9
UBR1-203ENST00000562173 CRIPAKQ8N1N5 446 aa9.45□□□□□ -0.9
UBR1-203ENST00000562173 SNIP1Q8TAD8 396 aaKnown RBP9.45□□□□□ -0.9
UBR1-203ENST00000562173 CARD14Q9BXL6 1004 aa9.45□□□□□ -0.9
UBR1-203ENST00000562173 YEATS2Q9ULM3 1422 aa9.45□□□□□ -0.9
UBR1-203ENST00000562173 TTC24A2A3L6 582 aaPredicted RBP9.44□□□□□ -0.9
UBR1-203ENST00000562173 VAC14Q08AM6 782 aa9.44□□□□□ -0.9
UBR1-203ENST00000562173 NBPF20Q3BBV1 942 aa9.44□□□□□ -0.9
UBR1-203ENST00000562173 ARID4BQ4LE39 1312 aaPredicted RBP9.44□□□□□ -0.9
UBR1-203ENST00000562173 ARHGEF40Q8TER5 1519 aa9.44□□□□□ -0.9
UBR1-203ENST00000562173 SPATA31D1Q6ZQQ2 1576 aa9.44□□□□□ -0.9
UBR1-203ENST00000562173 POTECB2RU33 542 aa9.43□□□□□ -0.9
UBR1-203ENST00000562173 J3QL48 77 aa9.43□□□□□ -0.9
UBR1-203ENST00000562173 TTC37Q6PGP7 1564 aa9.42□□□□□ -0.9
UBR1-203ENST00000562173 CEBPAP49715 358 aaPredicted RBP9.42□□□□□ -0.9
UBR1-203ENST00000562173 CCDC125Q86Z20 511 aa9.42□□□□□ -0.9
UBR1-203ENST00000562173 RANGAP1P46060 587 aaPredicted RBP9.41□□□□□ -0.9
UBR1-203ENST00000562173 CDK15Q96Q40 435 aa9.41□□□□□ -0.9
UBR1-203ENST00000562173 DACH1Q9UI36 760 aa9.41□□□□□ -0.9
UBR1-203ENST00000562173 PCDHB9Q9Y5E1 797 aa9.41□□□□□ -0.9
UBR1-203ENST00000562173 SIAH2O43255 324 aa9.4□□□□□ -0.9
UBR1-203ENST00000562173 SMCPP49901 116 aaPredicted RBP9.4□□□□□ -0.9
UBR1-203ENST00000562173 DZIP3Q86Y13 1208 aaKnown RBP9.4□□□□□ -0.9
UBR1-203ENST00000562173 SEPT12Q8IYM1 358 aa9.4□□□□□ -0.9
UBR1-203ENST00000562173 GLMNQ92990 594 aa9.4□□□□□ -0.9
UBR1-203ENST00000562173 RAPGEF6Q8TEU7 1601 aa9.39□□□□□ -0.91
UBR1-203ENST00000562173 POM121CA8CG34 1229 aa9.39□□□□□ -0.91
UBR1-203ENST00000562173 SEMA3FQ13275 785 aa9.39□□□□□ -0.91
UBR1-203ENST00000562173 CTC1Q2NKJ3 1217 aa9.39□□□□□ -0.91
UBR1-203ENST00000562173 ALG2Q9H553 416 aa9.39□□□□□ -0.91
UBR1-203ENST00000562173 AXIN1O15169 862 aa9.38□□□□□ -0.91
UBR1-203ENST00000562173 HECW1Q76N89 1606 aa9.38□□□□□ -0.91
UBR1-203ENST00000562173 PREX1Q8TCU6 1659 aa9.37□□□□□ -0.91
UBR1-203ENST00000562173 ADH1CP00326 375 aa9.37□□□□□ -0.91
UBR1-203ENST00000562173 NFATC2IPQ8NCF5 419 aa9.37□□□□□ -0.91
UBR1-203ENST00000562173 HPS1Q92902 700 aa9.37□□□□□ -0.91
UBR1-203ENST00000562173 TRIM52Q96A61 297 aa9.37□□□□□ -0.91
UBR1-203ENST00000562173 ESPNB1AK53 854 aa9.36□□□□□ -0.91
UBR1-203ENST00000562173 RNF20Q5VTR2 975 aa9.36□□□□□ -0.91
UBR1-203ENST00000562173 ADAMTS19Q8TE59 1207 aa9.36□□□□□ -0.91
UBR1-203ENST00000562173 CALR3Q96L12 384 aaKnown RBP9.36□□□□□ -0.91
UBR1-203ENST00000562173 TLL2Q9Y6L7 1015 aa9.36□□□□□ -0.91
UBR1-203ENST00000562173 SAMD9Q5K651 1589 aa9.36□□□□□ -0.91
UBR1-203ENST00000562173 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.36□□□□□ -0.91
UBR1-203ENST00000562173 NUP153P49790 1475 aaKnown RBP9.35□□□□□ -0.91
UBR1-203ENST00000562173 VASH1Q7L8A9 365 aaPredicted RBP9.35□□□□□ -0.91
UBR1-203ENST00000562173 FHOD3Q2V2M9 1422 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms