RNA–Protein interactions for RNA: ENST00000561722.5

FANCA-208, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-208ENST00000561722 COL3A1P02461 1466 aaPredicted RBP16.63■□□□□ 0.25
FANCA-208ENST00000561722 AEBP1Q8IUX7 1158 aa16.63■□□□□ 0.25
FANCA-208ENST00000561722 RAPGEF4Q8WZA2 1011 aa16.63■□□□□ 0.25
FANCA-208ENST00000561722 PRKRIP1Q9H875 184 aaPredicted RBP16.63■□□□□ 0.25
FANCA-208ENST00000561722 HMOX1P09601 288 aa16.62■□□□□ 0.25
FANCA-208ENST00000561722 TATP17735 454 aaPredicted RBP16.62■□□□□ 0.25
FANCA-208ENST00000561722 CDCA7Q9BWT1 371 aaPredicted RBP16.62■□□□□ 0.25
FANCA-208ENST00000561722 MYBBP1AQ9BQG0 1328 aaKnown RBP16.62■□□□□ 0.25
FANCA-208ENST00000561722 EXOC5O00471 708 aa16.61■□□□□ 0.25
FANCA-208ENST00000561722 SULT6B1Q6IMI4 303 aa16.61■□□□□ 0.25
FANCA-208ENST00000561722 IGSF1Q8N6C5 1336 aa16.61■□□□□ 0.25
FANCA-208ENST00000561722 TNS2Q63HR2 1409 aa16.61■□□□□ 0.25
FANCA-208ENST00000561722 EP400Q96L91 3159 aa16.61■□□□□ 0.25
FANCA-208ENST00000561722 RGPD1P0DJD0 1748 aa16.6■□□□□ 0.25
FANCA-208ENST00000561722 ANP32CO43423 234 aa16.6■□□□□ 0.25
FANCA-208ENST00000561722 SLC4A2P04920 1241 aa16.6■□□□□ 0.25
FANCA-208ENST00000561722 DDX54Q8TDD1 881 aaKnown RBP16.6■□□□□ 0.25
FANCA-208ENST00000561722 OVOS2A0A0G2JMS6 1433 aa16.59■□□□□ 0.25
FANCA-208ENST00000561722 MARCH10Q8NA82 808 aaPredicted RBP16.58■□□□□ 0.24
FANCA-208ENST00000561722 ZCRB1Q8TBF4 217 aaKnown RBP16.58■□□□□ 0.24
FANCA-208ENST00000561722 NCAPD2Q15021 1401 aa16.58■□□□□ 0.24
FANCA-208ENST00000561722 SHANK3Q9BYB0 1731 aa16.56■□□□□ 0.24
FANCA-208ENST00000561722 U2AF1L5P0DN76 240 aaPredicted RBP16.56■□□□□ 0.24
FANCA-208ENST00000561722 U2AF1Q01081 240 aaKnown RBP eCLIP16.56■□□□□ 0.24
FANCA-208ENST00000561722 NUDCQ9Y266 331 aa16.56■□□□□ 0.24
FANCA-208ENST00000561722 ACSBG1Q96GR2 724 aa16.54■□□□□ 0.24
FANCA-208ENST00000561722 PKD1L3Q7Z443 1732 aa16.53■□□□□ 0.24
FANCA-208ENST00000561722 FAM196AQ6ZSG2 479 aa16.53■□□□□ 0.24
FANCA-208ENST00000561722 SPG7Q9UQ90 795 aa16.53■□□□□ 0.24
FANCA-208ENST00000561722 PCDH11XQ9BZA7 1347 aa16.52■□□□□ 0.24
FANCA-208ENST00000561722 PCDH11YQ9BZA8 1340 aa16.52■□□□□ 0.24
FANCA-208ENST00000561722 TRIM37O94972 964 aa16.52■□□□□ 0.24
FANCA-208ENST00000561722 KDRP35968 1356 aa16.51■□□□□ 0.23
FANCA-208ENST00000561722 PRKAR2BP31323 418 aa16.51■□□□□ 0.23
FANCA-208ENST00000561722 CCDC184Q52MB2 194 aa16.51■□□□□ 0.23
FANCA-208ENST00000561722 PLEKHO1Q53GL0 409 aaPredicted RBP16.51■□□□□ 0.23
FANCA-208ENST00000561722 CYP27B1O15528 508 aa16.5■□□□□ 0.23
FANCA-208ENST00000561722 ZNF530Q6P9A1 599 aaPredicted RBP16.5■□□□□ 0.23
FANCA-208ENST00000561722 KAT6BQ8WYB5 2073 aa16.5■□□□□ 0.23
FANCA-208ENST00000561722 PTF1AQ7RTS3 328 aa16.49■□□□□ 0.23
FANCA-208ENST00000561722 DOT1LQ8TEK3 1739 aa16.49■□□□□ 0.23
FANCA-208ENST00000561722 SYTL4Q96C24 671 aaPredicted RBP16.49■□□□□ 0.23
FANCA-208ENST00000561722 RSPH6AQ9H0K4 717 aa16.49■□□□□ 0.23
FANCA-208ENST00000561722 SBF2Q86WG5 1849 aa16.48■□□□□ 0.23
FANCA-208ENST00000561722 KCNQ2O43526 872 aa16.48■□□□□ 0.23
FANCA-208ENST00000561722 SF3B2Q13435 895 aaKnown RBP16.48■□□□□ 0.23
FANCA-208ENST00000561722 WDR43Q15061 677 aaKnown RBP eCLIP16.48■□□□□ 0.231e-5■■■■□ 24.6
FANCA-208ENST00000561722 DIEXFQ68CQ4 756 aaKnown RBP16.48■□□□□ 0.23
FANCA-208ENST00000561722 PHKG2P15735 406 aa16.47■□□□□ 0.23
FANCA-208ENST00000561722 AMOTQ4VCS5 1084 aa16.47■□□□□ 0.23
FANCA-208ENST00000561722 MRS2Q9HD23 443 aa16.47■□□□□ 0.23
FANCA-208ENST00000561722 TNS1Q9HBL0 1735 aaKnown RBP16.46■□□□□ 0.23
FANCA-208ENST00000561722 DCAF8L1A6NGE4 600 aa16.46■□□□□ 0.23
FANCA-208ENST00000561722 MTHFSDQ2M296 383 aaKnown RBP16.46■□□□□ 0.23
FANCA-208ENST00000561722 C1orf141Q5JVX7 400 aa16.46■□□□□ 0.23
FANCA-208ENST00000561722 IFNL2Q8IZJ0 200 aa16.46■□□□□ 0.23
FANCA-208ENST00000561722 PHACTR3Q96KR7 559 aa16.46■□□□□ 0.23
FANCA-208ENST00000561722 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.46■□□□□ 0.232e-17■□□□□ 9.5
FANCA-208ENST00000561722 DEFB132Q7Z7B7 95 aa16.45■□□□□ 0.22
FANCA-208ENST00000561722 CCDC146Q8IYE0 955 aa16.45■□□□□ 0.22
FANCA-208ENST00000561722 TOGARAM1Q9Y4F4 1720 aa16.45■□□□□ 0.22
FANCA-208ENST00000561722 NHSQ6T4R5 1651 aa16.44■□□□□ 0.22
FANCA-208ENST00000561722 FCHSD2O94868 740 aa16.44■□□□□ 0.22
FANCA-208ENST00000561722 APBA3O96018 575 aa16.44■□□□□ 0.22
FANCA-208ENST00000561722 PRIM1P49642 420 aaKnown RBP16.44■□□□□ 0.22
FANCA-208ENST00000561722 NEFMP07197 916 aa16.43■□□□□ 0.22
FANCA-208ENST00000561722 MPRIPQ6WCQ1 1025 aa16.43■□□□□ 0.22
FANCA-208ENST00000561722 EN1Q05925 392 aaPredicted RBP16.42■□□□□ 0.22
FANCA-208ENST00000561722 BCL11BQ9C0K0 894 aaPredicted RBP16.42■□□□□ 0.22
FANCA-208ENST00000561722 ADAMTS8Q9UP79 889 aa16.42■□□□□ 0.22
FANCA-208ENST00000561722 BCL9O00512 1426 aa16.42■□□□□ 0.22
FANCA-208ENST00000561722 MAPK8IP3Q9UPT6 1336 aa16.42■□□□□ 0.22
FANCA-208ENST00000561722 BTAF1O14981 1849 aa16.41■□□□□ 0.22
FANCA-208ENST00000561722 BAG6P46379 1132 aa16.41■□□□□ 0.22
FANCA-208ENST00000561722 GAS2L2Q8NHY3 880 aa16.41■□□□□ 0.22
FANCA-208ENST00000561722 PLEKHG2Q9H7P9 1386 aa16.4■□□□□ 0.22
FANCA-208ENST00000561722 KDM6AO15550 1401 aaPredicted RBP16.4■□□□□ 0.22
FANCA-208ENST00000561722 SENP3-EIF4A1A0A087X0R7 540 aa16.4■□□□□ 0.22
FANCA-208ENST00000561722 HSP90AB1P08238 724 aaKnown RBP16.4■□□□□ 0.22
FANCA-208ENST00000561722 AKAP4Q5JQC9 854 aa16.4■□□□□ 0.22
FANCA-208ENST00000561722 CCDC125Q86Z20 511 aa16.4■□□□□ 0.22
FANCA-208ENST00000561722 ITGB4P16144 1822 aa16.4■□□□□ 0.22
FANCA-208ENST00000561722 NKX1-1Q15270 411 aaPredicted RBP16.39■□□□□ 0.21
FANCA-208ENST00000561722 PLEKHF1Q96S99 279 aa16.39■□□□□ 0.21
FANCA-208ENST00000561722 MAP3K5Q99683 1374 aa16.38■□□□□ 0.21
FANCA-208ENST00000561722 VIRMAQ69YN4 1812 aaKnown RBP16.38■□□□□ 0.21
FANCA-208ENST00000561722 EZH2Q15910 746 aaKnown RBP16.38■□□□□ 0.21
FANCA-208ENST00000561722 DCAF5Q96JK2 942 aa16.38■□□□□ 0.21
FANCA-208ENST00000561722 PNNQ9H307 717 aaKnown RBP16.38■□□□□ 0.21
FANCA-208ENST00000561722 LGR6Q9HBX8 967 aa16.38■□□□□ 0.21
FANCA-208ENST00000561722 TMOD3Q9NYL9 352 aa16.38■□□□□ 0.21
FANCA-208ENST00000561722 RRP7AQ9Y3A4 280 aaKnown RBP16.38■□□□□ 0.21
FANCA-208ENST00000561722 GNAT3A8MTJ3 354 aa16.37■□□□□ 0.21
FANCA-208ENST00000561722 CABP4P57796 275 aa16.37■□□□□ 0.21
FANCA-208ENST00000561722 FAM9BQ8IZU0 186 aa16.37■□□□□ 0.21
FANCA-208ENST00000561722 MIER1Q8N108 512 aa16.37■□□□□ 0.21
FANCA-208ENST00000561722 SCN11AQ9UI33 1791 aa16.36■□□□□ 0.21
FANCA-208ENST00000561722 RNMTO43148 476 aaKnown RBP16.36■□□□□ 0.21
FANCA-208ENST00000561722 MYCNP04198 464 aaPredicted RBP16.36■□□□□ 0.21
FANCA-208ENST00000561722 DCTN1Q14203 1278 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms