RNA–Protein interactions for RNA: ENST00000561211.5

USP8-217, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-217ENST00000561211 CNTNAP3BQ96NU0 1288 aa6.6□□□□□ -1.35
USP8-217ENST00000561211 CNTNAP3Q9BZ76 1288 aa6.6□□□□□ -1.35
USP8-217ENST00000561211 TMPRSS4Q9NRS4 437 aa6.6□□□□□ -1.35
USP8-217ENST00000561211 SLC35F4A4IF30 521 aa6.59□□□□□ -1.35
USP8-217ENST00000561211 WASHC4Q2M389 1173 aa6.59□□□□□ -1.35
USP8-217ENST00000561211 HDGFL1Q5TGJ6 251 aa6.59□□□□□ -1.35
USP8-217ENST00000561211 WWC1Q8IX03 1113 aa6.59□□□□□ -1.35
USP8-217ENST00000561211 RNF217Q8TC41 542 aa6.59□□□□□ -1.35
USP8-217ENST00000561211 NANOS1Q8WY41 292 aaKnown RBP6.59□□□□□ -1.35
USP8-217ENST00000561211 POLMQ9NP87 494 aaPredicted RBP6.59□□□□□ -1.35
USP8-217ENST00000561211 ADH1AP07327 375 aa6.58□□□□□ -1.36
USP8-217ENST00000561211 ITGA6P23229 1130 aa6.58□□□□□ -1.36
USP8-217ENST00000561211 RNFT1Q5M7Z0 435 aa6.58□□□□□ -1.36
USP8-217ENST00000561211 DZIP3Q86Y13 1208 aaKnown RBP6.58□□□□□ -1.36
USP8-217ENST00000561211 GLMNQ92990 594 aa6.58□□□□□ -1.36
USP8-217ENST00000561211 ARID3AQ99856 593 aa6.58□□□□□ -1.36
USP8-217ENST00000561211 COL25A1Q9BXS0 654 aaPredicted RBP6.58□□□□□ -1.36
USP8-217ENST00000561211 ALG2Q9H553 416 aa6.58□□□□□ -1.36
USP8-217ENST00000561211 ZNF395Q9H8N7 513 aaPredicted RBP6.58□□□□□ -1.36
USP8-217ENST00000561211 ERVH48-1M5A8F1 160 aa6.57□□□□□ -1.36
USP8-217ENST00000561211 LILRA1O75019 489 aa6.57□□□□□ -1.36
USP8-217ENST00000561211 PCDHB9Q9Y5E1 797 aa6.57□□□□□ -1.36
USP8-217ENST00000561211 SENP3-EIF4A1A0A087X0R7 540 aa6.56□□□□□ -1.36
USP8-217ENST00000561211 CDC14CA4D256 554 aa6.56□□□□□ -1.36
USP8-217ENST00000561211 ESPNB1AK53 854 aa6.56□□□□□ -1.36
USP8-217ENST00000561211 ADD1P35611 737 aaKnown RBP6.56□□□□□ -1.36
USP8-217ENST00000561211 FOXD4L5Q5VV16 416 aaPredicted RBP6.56□□□□□ -1.36
USP8-217ENST00000561211 KDF1Q8NAX2 398 aaPredicted RBP6.56□□□□□ -1.36
USP8-217ENST00000561211 CALR3Q96L12 384 aaKnown RBP6.56□□□□□ -1.36
USP8-217ENST00000561211 GSK3AP49840 483 aa6.55□□□□□ -1.36
USP8-217ENST00000561211 KCNMA1Q12791 1236 aa6.55□□□□□ -1.36
USP8-217ENST00000561211 SEMA3FQ13275 785 aa6.55□□□□□ -1.36
USP8-217ENST00000561211 VWA5B2Q8N398 1253 aa6.55□□□□□ -1.36
USP8-217ENST00000561211 CCDC82Q8N4S0 544 aa6.55□□□□□ -1.36
USP8-217ENST00000561211 PIK3CDO00329 1044 aa6.54□□□□□ -1.36
USP8-217ENST00000561211 PTGIRP43119 386 aa6.54□□□□□ -1.36
USP8-217ENST00000561211 EIF4G2P78344 907 aaKnown RBP eCLIP6.54□□□□□ -1.36
USP8-217ENST00000561211 ZNF385CQ66K41 422 aaPredicted RBP6.54□□□□□ -1.36
USP8-217ENST00000561211 SV2AQ7L0J3 742 aa6.54□□□□□ -1.36
USP8-217ENST00000561211 SVOPQ8N4V2 548 aa6.54□□□□□ -1.36
USP8-217ENST00000561211 UCN2Q96RP3 112 aa6.54□□□□□ -1.36
USP8-217ENST00000561211 CYLDQ9NQC7 956 aa6.54□□□□□ -1.36
USP8-217ENST00000561211 TSGA10IPQ3SY00 556 aa6.53□□□□□ -1.36
USP8-217ENST00000561211 CEP126Q9P2H0 1117 aa6.53□□□□□ -1.36
USP8-217ENST00000561211 ADAMTS8Q9UP79 889 aa6.53□□□□□ -1.36
USP8-217ENST00000561211 GIGYF1O75420 1035 aaPredicted RBP6.52□□□□□ -1.37
USP8-217ENST00000561211 SLURP2P0DP57 97 aa6.52□□□□□ -1.37
USP8-217ENST00000561211 SEPT12Q8IYM1 358 aa6.52□□□□□ -1.37
USP8-217ENST00000561211 WHAMMQ8TF30 809 aa6.52□□□□□ -1.37
USP8-217ENST00000561211 TBC1D9Q6ZT07 1266 aa6.51□□□□□ -1.37
USP8-217ENST00000561211 LYSMD3Q7Z3D4 306 aa6.51□□□□□ -1.37
USP8-217ENST00000561211 KCTD17Q8N5Z5 321 aa6.51□□□□□ -1.37
USP8-217ENST00000561211 CUEDC1Q9NWM3 386 aaPredicted RBP6.51□□□□□ -1.37
USP8-217ENST00000561211 RNF225M0QZC1 329 aaPredicted RBP6.5□□□□□ -1.37
USP8-217ENST00000561211 SOX11P35716 441 aa6.5□□□□□ -1.37
USP8-217ENST00000561211 RASSF7Q02833 373 aa6.5□□□□□ -1.37
USP8-217ENST00000561211 PHTF2Q8N3S3 785 aa6.5□□□□□ -1.37
USP8-217ENST00000561211 TFIP11Q9UBB9 837 aaKnown RBP6.5□□□□□ -1.37
USP8-217ENST00000561211 ATP5J2-PTCD1G3V325 749 aa6.49□□□□□ -1.37
USP8-217ENST00000561211 RHOQP17081 205 aa6.49□□□□□ -1.37
USP8-217ENST00000561211 RFX1P22670 979 aa6.49□□□□□ -1.37
USP8-217ENST00000561211 PRICKLE2Q7Z3G6 844 aa6.49□□□□□ -1.37
USP8-217ENST00000561211 CCDC97Q96F63 343 aaPredicted RBP6.49□□□□□ -1.37
USP8-217ENST00000561211 PPP1R12CQ9BZL4 782 aa6.49□□□□□ -1.37
USP8-217ENST00000561211 PALM3A6NDB9 673 aaPredicted RBP6.48□□□□□ -1.37
USP8-217ENST00000561211 ARHGEF15O94989 841 aa6.48□□□□□ -1.37
USP8-217ENST00000561211 GDF11O95390 407 aa6.48□□□□□ -1.37
USP8-217ENST00000561211 ADAMTS2O95450 1211 aa6.48□□□□□ -1.37
USP8-217ENST00000561211 RNF144AP50876 292 aaPredicted RBP6.48□□□□□ -1.37
USP8-217ENST00000561211 GAS6Q14393 721 aa6.48□□□□□ -1.37
USP8-217ENST00000561211 TMEM151AQ8N4L1 468 aa6.48□□□□□ -1.37
USP8-217ENST00000561211 CCDC85AQ96PX6 553 aaPredicted RBP6.48□□□□□ -1.37
USP8-217ENST00000561211 SERPINA10Q9UK55 444 aa6.48□□□□□ -1.37
USP8-217ENST00000561211 MEN1O00255 615 aa6.47□□□□□ -1.37
USP8-217ENST00000561211 SKIP12755 728 aa6.47□□□□□ -1.37
USP8-217ENST00000561211 MCCD1P59942 119 aaPredicted RBP6.47□□□□□ -1.37
USP8-217ENST00000561211 SLFNL1Q499Z3 407 aa6.47□□□□□ -1.37
USP8-217ENST00000561211 CFAP70Q5T0N1 1121 aa6.47□□□□□ -1.37
USP8-217ENST00000561211 RNF135Q8IUD6 432 aa6.47□□□□□ -1.37
USP8-217ENST00000561211 DEPDC4Q8N2C3 294 aa6.47□□□□□ -1.37
USP8-217ENST00000561211 TRIM52Q96A61 297 aa6.47□□□□□ -1.37
USP8-217ENST00000561211 CDCA7Q9BWT1 371 aaPredicted RBP6.47□□□□□ -1.37
USP8-217ENST00000561211 LMOD1P29536 600 aaPredicted RBP6.46□□□□□ -1.38
USP8-217ENST00000561211 ERVK-9P63128 1117 aa6.46□□□□□ -1.38
USP8-217ENST00000561211 SRSF11Q05519 484 aaKnown RBP6.46□□□□□ -1.38
USP8-217ENST00000561211 CDCA8Q53HL2 280 aa6.46□□□□□ -1.38
USP8-217ENST00000561211 A0A1W2PRU2 124 aa6.45□□□□□ -1.38
USP8-217ENST00000561211 GPC1P35052 558 aa6.45□□□□□ -1.38
USP8-217ENST00000561211 IRS1P35568 1242 aa6.45□□□□□ -1.38
USP8-217ENST00000561211 CC2D2BQ6DHV5 1058 aa6.45□□□□□ -1.38
USP8-217ENST00000561211 LYPD4Q6UWN0 246 aa6.45□□□□□ -1.38
USP8-217ENST00000561211 ZNF837Q96EG3 531 aaPredicted RBP6.45□□□□□ -1.38
USP8-217ENST00000561211 MAFBQ9Y5Q3 323 aaPredicted RBP6.45□□□□□ -1.38
USP8-217ENST00000561211 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.44□□□□□ -1.38
USP8-217ENST00000561211 LOC100996750A0A140TA64 210 aa6.44□□□□□ -1.38
USP8-217ENST00000561211 GPR25O00155 361 aa6.44□□□□□ -1.38
USP8-217ENST00000561211 ATP9BO43861 1147 aa6.44□□□□□ -1.38
USP8-217ENST00000561211 SCTRP47872 440 aa6.44□□□□□ -1.38
USP8-217ENST00000561211 RNF20Q5VTR2 975 aa6.44□□□□□ -1.38
USP8-217ENST00000561211 RIPOR1Q6ZS17 1223 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms