RNA–Protein interactions for RNA: ENST00000561116.5

FAM227B-213, Transcript of family with sequence similarity 227 member B, humanhuman

TSL 3

Gene FAM227B, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM227B-213ENST00000561116 TRIM50Q86XT4 487 aa7.18□□□□□ -1.26
FAM227B-213ENST00000561116 PHTF2Q8N3S3 785 aa7.18□□□□□ -1.26
FAM227B-213ENST00000561116 KCTD15Q96SI1 283 aaPredicted RBP7.18□□□□□ -1.26
FAM227B-213ENST00000561116 C1QTNF2Q9BXJ5 285 aa7.18□□□□□ -1.26
FAM227B-213ENST00000561116 MKRN1Q9UHC7 482 aaKnown RBP7.18□□□□□ -1.26
FAM227B-213ENST00000561116 DOLKQ9UPQ8 538 aa7.18□□□□□ -1.26
FAM227B-213ENST00000561116 RBM19Q9Y4C8 960 aaKnown RBP7.18□□□□□ -1.26
FAM227B-213ENST00000561116 DEPDC4Q8N2C3 294 aa7.17□□□□□ -1.26
FAM227B-213ENST00000561116 IRF7Q92985 503 aa7.17□□□□□ -1.26
FAM227B-213ENST00000561116 NOD1Q9Y239 953 aa7.17□□□□□ -1.26
FAM227B-213ENST00000561116 ATG7O95352 703 aa7.16□□□□□ -1.26
FAM227B-213ENST00000561116 ATP1A2P50993 1020 aa7.16□□□□□ -1.26
FAM227B-213ENST00000561116 DHX9Q08211 1270 aaKnown RBP7.16□□□□□ -1.26
FAM227B-213ENST00000561116 NCOA4Q13772 614 aa7.16□□□□□ -1.26
FAM227B-213ENST00000561116 SCARF1Q14162 830 aa7.16□□□□□ -1.26
FAM227B-213ENST00000561116 TRIM46Q7Z4K8 759 aa7.16□□□□□ -1.26
FAM227B-213ENST00000561116 NPAS3Q8IXF0 933 aa7.16□□□□□ -1.26
FAM227B-213ENST00000561116 MAP4K5Q9Y4K4 846 aa7.16□□□□□ -1.26
FAM227B-213ENST00000561116 MYCP01106 439 aaPredicted RBP7.15□□□□□ -1.26
FAM227B-213ENST00000561116 RASA1P20936 1047 aa7.15□□□□□ -1.26
FAM227B-213ENST00000561116 RAB15P59190 212 aa7.15□□□□□ -1.26
FAM227B-213ENST00000561116 SRPK2P78362 688 aaKnown RBP7.15□□□□□ -1.26
FAM227B-213ENST00000561116 MPNDQ8N594 471 aa7.15□□□□□ -1.26
FAM227B-213ENST00000561116 ZFP42Q96MM3 310 aa7.15□□□□□ -1.26
FAM227B-213ENST00000561116 PCDHB11Q9Y5F2 797 aa7.15□□□□□ -1.26
FAM227B-213ENST00000561116 VEGFBP49765 207 aa7.14□□□□□ -1.27
FAM227B-213ENST00000561116 NNTQ13423 1086 aa7.14□□□□□ -1.27
FAM227B-213ENST00000561116 OXLD1Q5BKU9 147 aa7.14□□□□□ -1.27
FAM227B-213ENST00000561116 KANK4Q5T7N3 995 aaPredicted RBP7.14□□□□□ -1.27
FAM227B-213ENST00000561116 RETREG2Q8NC44 543 aa7.14□□□□□ -1.27
FAM227B-213ENST00000561116 CDK15Q96Q40 435 aa7.14□□□□□ -1.27
FAM227B-213ENST00000561116 TRAIPQ9BWF2 469 aa7.14□□□□□ -1.27
FAM227B-213ENST00000561116 CHIC2Q9UKJ5 165 aa7.14□□□□□ -1.27
FAM227B-213ENST00000561116 TLL2Q9Y6L7 1015 aa7.14□□□□□ -1.27
FAM227B-213ENST00000561116 ZBTB7CA1YPR0 619 aa7.13□□□□□ -1.27
FAM227B-213ENST00000561116 ESPNB1AK53 854 aa7.13□□□□□ -1.27
FAM227B-213ENST00000561116 GMPRP36959 345 aa7.13□□□□□ -1.27
FAM227B-213ENST00000561116 WDR4P57081 412 aaKnown RBP7.13□□□□□ -1.27
FAM227B-213ENST00000561116 NR5A1Q13285 461 aa7.13□□□□□ -1.27
FAM227B-213ENST00000561116 LCE2CQ5TA81 110 aa7.13□□□□□ -1.27
FAM227B-213ENST00000561116 KCTD17Q8N5Z5 321 aa7.13□□□□□ -1.27
FAM227B-213ENST00000561116 USTQ9Y2C2 406 aa7.13□□□□□ -1.27
FAM227B-213ENST00000561116 FAM196BA6NMK8 535 aa7.12□□□□□ -1.27
FAM227B-213ENST00000561116 ELOAQ14241 798 aaKnown RBP7.12□□□□□ -1.27
FAM227B-213ENST00000561116 TSGA10IPQ3SY00 556 aa7.12□□□□□ -1.27
FAM227B-213ENST00000561116 ZSCAN1Q8NBB4 408 aa7.12□□□□□ -1.27
FAM227B-213ENST00000561116 FAM200AQ8TCP9 573 aa7.12□□□□□ -1.27
FAM227B-213ENST00000561116 CCDC85AQ96PX6 553 aaPredicted RBP7.12□□□□□ -1.27
FAM227B-213ENST00000561116 PSME1Q06323 249 aa7.11□□□□□ -1.27
FAM227B-213ENST00000561116 MRPL14Q6P1L8 145 aaKnown RBP7.11□□□□□ -1.27
FAM227B-213ENST00000561116 LARGE2Q8N3Y3 721 aa7.11□□□□□ -1.27
FAM227B-213ENST00000561116 OGFOD1Q8N543 542 aa7.11□□□□□ -1.27
FAM227B-213ENST00000561116 PURBQ96QR8 312 aaKnown RBP7.11□□□□□ -1.27
FAM227B-213ENST00000561116 CDCA7Q9BWT1 371 aaPredicted RBP7.11□□□□□ -1.27
FAM227B-213ENST00000561116 DNAAF2Q9NVR5 837 aaKnown RBP7.11□□□□□ -1.27
FAM227B-213ENST00000561116 NOVA2Q9UNW9 492 aaKnown RBP7.11□□□□□ -1.27
FAM227B-213ENST00000561116 PATL2C9JE40 543 aaKnown RBP7.1□□□□□ -1.27
FAM227B-213ENST00000561116 ERVH48-1M5A8F1 160 aa7.1□□□□□ -1.27
FAM227B-213ENST00000561116 ADH1CP00326 375 aa7.1□□□□□ -1.27
FAM227B-213ENST00000561116 FSHRP23945 695 aa7.1□□□□□ -1.27
FAM227B-213ENST00000561116 INTS6LQ5JSJ4 861 aaKnown RBP7.1□□□□□ -1.27
FAM227B-213ENST00000561116 PGPEP1Q9NXJ5 209 aa7.1□□□□□ -1.27
FAM227B-213ENST00000561116 USP17L15C9J2P7 530 aa7.09□□□□□ -1.27
FAM227B-213ENST00000561116 USP17L10C9JJH3 530 aa7.09□□□□□ -1.27
FAM227B-213ENST00000561116 USP17L13C9JLJ4 530 aa7.09□□□□□ -1.27
FAM227B-213ENST00000561116 USP17L12C9JPN9 530 aa7.09□□□□□ -1.27
FAM227B-213ENST00000561116 USP17L11C9JVI0 530 aa7.09□□□□□ -1.27
FAM227B-213ENST00000561116 USP17L21D6R901 530 aa7.09□□□□□ -1.27
FAM227B-213ENST00000561116 USP17L18D6R9N7 530 aa7.09□□□□□ -1.27
FAM227B-213ENST00000561116 USP17L22D6RA61 530 aa7.09□□□□□ -1.27
FAM227B-213ENST00000561116 USP17L17D6RBQ6 530 aa7.09□□□□□ -1.27
FAM227B-213ENST00000561116 USP17L19D6RCP7 530 aa7.09□□□□□ -1.27
FAM227B-213ENST00000561116 USP17L20D6RJB6 530 aa7.09□□□□□ -1.27
FAM227B-213ENST00000561116 H3BM21 787 aa7.09□□□□□ -1.27
FAM227B-213ENST00000561116 GRM5P41594 1212 aa7.09□□□□□ -1.27
FAM227B-213ENST00000561116 USP17L24Q0WX57 530 aa7.09□□□□□ -1.27
FAM227B-213ENST00000561116 B4GALNT3Q6L9W6 998 aa7.09□□□□□ -1.27
FAM227B-213ENST00000561116 CCDC116Q8IYX3 515 aa7.09□□□□□ -1.27
FAM227B-213ENST00000561116 UPP2O95045 317 aa7.08□□□□□ -1.28
FAM227B-213ENST00000561116 TIMP2P16035 220 aa7.08□□□□□ -1.28
FAM227B-213ENST00000561116 GTF2IP78347 998 aa7.08□□□□□ -1.28
FAM227B-213ENST00000561116 PTK7Q13308 1070 aa7.08□□□□□ -1.28
FAM227B-213ENST00000561116 CC2D2BQ6DHV5 1058 aa7.08□□□□□ -1.28
FAM227B-213ENST00000561116 AEBP1Q8IUX7 1158 aa7.08□□□□□ -1.28
FAM227B-213ENST00000561116 ANKMY2Q8IV38 441 aa7.08□□□□□ -1.28
FAM227B-213ENST00000561116 ZNF594Q96JF6 807 aaPredicted RBP7.08□□□□□ -1.28
FAM227B-213ENST00000561116 EMILIN1Q9Y6C2 1016 aa7.08□□□□□ -1.28
FAM227B-213ENST00000561116 SEC13P55735 322 aa7.07□□□□□ -1.28
FAM227B-213ENST00000561116 CRTC2Q53ET0 693 aaPredicted RBP7.07□□□□□ -1.28
FAM227B-213ENST00000561116 CCDC102BQ68D86 513 aa7.07□□□□□ -1.28
FAM227B-213ENST00000561116 MAN1A2O60476 641 aa7.06□□□□□ -1.28
FAM227B-213ENST00000561116 ZIC2O95409 532 aaPredicted RBP7.06□□□□□ -1.28
FAM227B-213ENST00000561116 C6orf118Q5T5N4 469 aa7.06□□□□□ -1.28
FAM227B-213ENST00000561116 PPP1R26Q5T8A7 1209 aaPredicted RBP7.06□□□□□ -1.28
FAM227B-213ENST00000561116 SOBPA7XYQ1 873 aa7.05□□□□□ -1.28
FAM227B-213ENST00000561116 BRD1O95696 1058 aa7.05□□□□□ -1.28
FAM227B-213ENST00000561116 ERVK-9P63128 1117 aa7.05□□□□□ -1.28
FAM227B-213ENST00000561116 CLDN10P78369 228 aa7.05□□□□□ -1.28
FAM227B-213ENST00000561116 DPYDQ12882 1025 aa7.05□□□□□ -1.28
FAM227B-213ENST00000561116 TPCN2Q8NHX9 752 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms