RNA–Protein interactions for RNA: ENST00000561116.5

FAM227B-213, Transcript of family with sequence similarity 227 member B, humanhuman

TSL 3

Gene FAM227B, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM227B-213ENST00000561116 AEBP2Q6ZN18 517 aaPredicted RBP20.3■□□□□ 0.84
FAM227B-213ENST00000561116 CHIC1Q5VXU3 224 aa19.28■□□□□ 0.68
FAM227B-213ENST00000561116 SENP3Q9H4L4 574 aaPredicted RBP17.41■□□□□ 0.38
FAM227B-213ENST00000561116 PHF23Q9BUL5 403 aaPredicted RBP17.19■□□□□ 0.34
FAM227B-213ENST00000561116 FOXD1Q16676 465 aa16.18■□□□□ 0.18
FAM227B-213ENST00000561116 POTEDQ86YR6 584 aa15.67■□□□□ 0.1
FAM227B-213ENST00000561116 PLPPR3Q6T4P5 718 aa15.45■□□□□ 0.06
FAM227B-213ENST00000561116 MSH5O43196 834 aa15.23■□□□□ 0.03
FAM227B-213ENST00000561116 PIAS4Q8N2W9 510 aaPredicted RBP15.17■□□□□ 0.02
FAM227B-213ENST00000561116 PPP6R1Q9UPN7 881 aa15.1■□□□□ 0.01
FAM227B-213ENST00000561116 ADRA2BP18089 450 aa15.09■□□□□ 0.01
FAM227B-213ENST00000561116 SCAF1Q9H7N4 1312 aaKnown RBP13.91□□□□□ -0.18
FAM227B-213ENST00000561116 MAPK8IP2Q13387 824 aaPredicted RBP13.87□□□□□ -0.19
FAM227B-213ENST00000561116 DMRT2Q9Y5R5 561 aa13.76□□□□□ -0.21
FAM227B-213ENST00000561116 PPP4R3CPQ6ZMV5 832 aa13.52□□□□□ -0.25
FAM227B-213ENST00000561116 DCAF8L1A6NGE4 600 aa13.34□□□□□ -0.27
FAM227B-213ENST00000561116 CNKSR2Q8WXI2 1034 aa13.29□□□□□ -0.28
FAM227B-213ENST00000561116 HOXD11P31277 338 aaPredicted RBP13.23□□□□□ -0.29
FAM227B-213ENST00000561116 RNF216Q9NWF9 866 aaPredicted RBP13.16□□□□□ -0.3
FAM227B-213ENST00000561116 CACNB1Q02641 598 aaPredicted RBP13.14□□□□□ -0.31
FAM227B-213ENST00000561116 NCBP3Q53F19 620 aaKnown RBP13.07□□□□□ -0.32
FAM227B-213ENST00000561116 RNF39Q9H2S5 420 aa12.93□□□□□ -0.34
FAM227B-213ENST00000561116 C1QBPQ07021 282 aaKnown RBP12.8□□□□□ -0.36
FAM227B-213ENST00000561116 DNAJC5BQ9UF47 199 aa12.78□□□□□ -0.36
FAM227B-213ENST00000561116 NPM3O75607 178 aaKnown RBP12.77□□□□□ -0.37
FAM227B-213ENST00000561116 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.73□□□□□ -0.37
FAM227B-213ENST00000561116 KCNA4P22459 653 aa12.71□□□□□ -0.37
FAM227B-213ENST00000561116 U3KPZ7 1027 aaPredicted RBP12.33□□□□□ -0.44
FAM227B-213ENST00000561116 CAPN15O75808 1086 aa12.26□□□□□ -0.45
FAM227B-213ENST00000561116 SLC4A1APQ9BWU0 796 aaKnown RBP12.23□□□□□ -0.45
FAM227B-213ENST00000561116 EHMT2Q96KQ7 1210 aa12.19□□□□□ -0.46
FAM227B-213ENST00000561116 SPINK5Q9NQ38 1064 aaPredicted RBP12.19□□□□□ -0.46
FAM227B-213ENST00000561116 SLC4A2P04920 1241 aa12.17□□□□□ -0.46
FAM227B-213ENST00000561116 APLP2Q06481 763 aa12.13□□□□□ -0.47
FAM227B-213ENST00000561116 DSG3P32926 999 aa12.11□□□□□ -0.47
FAM227B-213ENST00000561116 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.09□□□□□ -0.47
FAM227B-213ENST00000561116 HNRNPUL2Q1KMD3 747 aaKnown RBP12.09□□□□□ -0.47
FAM227B-213ENST00000561116 TRHP20396 242 aaPredicted RBP12.06□□□□□ -0.48
FAM227B-213ENST00000561116 POTEHQ6S545 545 aa12.06□□□□□ -0.48
FAM227B-213ENST00000561116 ZNF219Q9P2Y4 722 aaPredicted RBP12□□□□□ -0.49
FAM227B-213ENST00000561116 SAMD1Q6SPF0 538 aaPredicted RBP11.99□□□□□ -0.49
FAM227B-213ENST00000561116 ABCB7O75027 752 aa11.93□□□□□ -0.5
FAM227B-213ENST00000561116 CSRNP3Q8WYN3 585 aa11.87□□□□□ -0.51
FAM227B-213ENST00000561116 MYCNP04198 464 aaPredicted RBP11.84□□□□□ -0.51
FAM227B-213ENST00000561116 POLA2Q14181 598 aa11.7□□□□□ -0.54
FAM227B-213ENST00000561116 FOXD4L1Q9NU39 408 aa11.7□□□□□ -0.54
FAM227B-213ENST00000561116 ZBTB22O15209 634 aa11.62□□□□□ -0.55
FAM227B-213ENST00000561116 RBM42Q9BTD8 480 aaKnown RBP11.62□□□□□ -0.55
FAM227B-213ENST00000561116 ATF5Q9Y2D1 282 aaPredicted RBP11.52□□□□□ -0.57
FAM227B-213ENST00000561116 ZBTB12Q9Y330 459 aaPredicted RBP11.47□□□□□ -0.57
FAM227B-213ENST00000561116 ATXN8OSP0DMR3 200 aa11.35□□□□□ -0.59
FAM227B-213ENST00000561116 CHRDL2Q6WN34 429 aa11.35□□□□□ -0.59
FAM227B-213ENST00000561116 AKT1S1Q96B36 256 aa11.33□□□□□ -0.6
FAM227B-213ENST00000561116 OSCARQ8IYS5 282 aa11.27□□□□□ -0.61
FAM227B-213ENST00000561116 REM2Q8IYK8 340 aaPredicted RBP11.21□□□□□ -0.61
FAM227B-213ENST00000561116 FBLN2P98095 1184 aa11.2□□□□□ -0.62
FAM227B-213ENST00000561116 SPDYE2BA6NHP3 402 aa11.08□□□□□ -0.64
FAM227B-213ENST00000561116 SPDYE6P0CI01 402 aa11.08□□□□□ -0.64
FAM227B-213ENST00000561116 SPDYE2Q495Y8 402 aa11.08□□□□□ -0.64
FAM227B-213ENST00000561116 PITPNM1O00562 1244 aa11.06□□□□□ -0.64
FAM227B-213ENST00000561116 PIP4P2Q8N4L2 257 aa11.05□□□□□ -0.64
FAM227B-213ENST00000561116 ZNF692Q9BU19 519 aaPredicted RBP11□□□□□ -0.65
FAM227B-213ENST00000561116 FXR2P51116 673 aaKnown RBP eCLIP10.97□□□□□ -0.65
FAM227B-213ENST00000561116 MKRN4PQ13434 485 aaPredicted RBP10.97□□□□□ -0.65
FAM227B-213ENST00000561116 HAX1O00165 279 aa10.96□□□□□ -0.65
FAM227B-213ENST00000561116 CLEC11AQ9Y240 323 aa10.96□□□□□ -0.65
FAM227B-213ENST00000561116 SPDYE1Q8NFV5 336 aaPredicted RBP10.93□□□□□ -0.66
FAM227B-213ENST00000561116 SP7Q8TDD2 431 aaPredicted RBP10.93□□□□□ -0.66
FAM227B-213ENST00000561116 SSUH2Q9Y2M2 353 aa10.86□□□□□ -0.67
FAM227B-213ENST00000561116 PRKAR2AP13861 404 aaKnown RBP10.83□□□□□ -0.68
FAM227B-213ENST00000561116 PABPN1Q86U42 306 aaKnown RBP eCLIP10.8□□□□□ -0.68
FAM227B-213ENST00000561116 FKBP8Q14318 412 aa10.78□□□□□ -0.68
FAM227B-213ENST00000561116 PRR29P0C7W0 189 aa10.77□□□□□ -0.69
FAM227B-213ENST00000561116 EVX2Q03828 476 aa10.7□□□□□ -0.7
FAM227B-213ENST00000561116 CHADLQ6NUI6 762 aa10.69□□□□□ -0.7
FAM227B-213ENST00000561116 C19orf67A6NJJ6 358 aa10.62□□□□□ -0.71
FAM227B-213ENST00000561116 STAG3Q9UJ98 1225 aa10.55□□□□□ -0.72
FAM227B-213ENST00000561116 SPDYE4A6NLX3 237 aa10.53□□□□□ -0.72
FAM227B-213ENST00000561116 FARP1Q9Y4F1 1045 aaPredicted RBP10.52□□□□□ -0.73
FAM227B-213ENST00000561116 GABBR2O75899 941 aa10.51□□□□□ -0.73
FAM227B-213ENST00000561116 CD44P16070 742 aaKnown RBP10.48□□□□□ -0.73
FAM227B-213ENST00000561116 PLSCR2Q9NRY7 297 aa10.46□□□□□ -0.73
FAM227B-213ENST00000561116 FBXO3Q9UK99 471 aa10.42□□□□□ -0.74
FAM227B-213ENST00000561116 CREBZFQ9NS37 354 aa10.39□□□□□ -0.75
FAM227B-213ENST00000561116 CLCN6P51797 869 aa10.38□□□□□ -0.75
FAM227B-213ENST00000561116 AMER1Q5JTC6 1135 aaPredicted RBP10.38□□□□□ -0.75
FAM227B-213ENST00000561116 ZRANB1Q9UGI0 708 aa10.35□□□□□ -0.75
FAM227B-213ENST00000561116 PAK3O75914 559 aaPredicted RBP10.31□□□□□ -0.76
FAM227B-213ENST00000561116 NPM1P06748 294 aaKnown RBP eCLIP10.31□□□□□ -0.76
FAM227B-213ENST00000561116 DCBLD2Q96PD2 775 aa10.3□□□□□ -0.76
FAM227B-213ENST00000561116 LHX8Q68G74 356 aa10.29□□□□□ -0.76
FAM227B-213ENST00000561116 PROM2Q8N271 834 aa10.27□□□□□ -0.77
FAM227B-213ENST00000561116 ZNF579Q8NAF0 562 aaKnown RBP10.26□□□□□ -0.77
FAM227B-213ENST00000561116 RTN4Q9NQC3 1192 aaKnown RBP10.25□□□□□ -0.77
FAM227B-213ENST00000561116 POTEIP0CG38 1075 aa10.22□□□□□ -0.77
FAM227B-213ENST00000561116 PLEKHG5O94827 1062 aa10.17□□□□□ -0.78
FAM227B-213ENST00000561116 VASPP50552 380 aaPredicted RBP10.16□□□□□ -0.78
FAM227B-213ENST00000561116 GALR2O43603 387 aaPredicted RBP10.15□□□□□ -0.78
FAM227B-213ENST00000561116 MNX1P50219 401 aaPredicted RBP10.15□□□□□ -0.78
FAM227B-213ENST00000561116 PHF12Q96QT6 1004 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms