RNA–Protein interactions for RNA: ENST00000560379.1

USP8-210, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-210ENST00000560379 ZNF428Q96B54 188 aa9.38□□□□□ -0.91
USP8-210ENST00000560379 DIXDC1Q155Q3 683 aa9.37□□□□□ -0.91
USP8-210ENST00000560379 MTMR14Q8NCE2 650 aa9.37□□□□□ -0.91
USP8-210ENST00000560379 ABCA10Q8WWZ4 1543 aa9.36□□□□□ -0.91
USP8-210ENST00000560379 ABCA5Q8WWZ7 1642 aa9.36□□□□□ -0.91
USP8-210ENST00000560379 PPFIA3O75145 1194 aa9.36□□□□□ -0.91
USP8-210ENST00000560379 HMGB1P09429 215 aaKnown RBP9.36□□□□□ -0.91
USP8-210ENST00000560379 PPP2R2DQ66LE6 453 aa9.36□□□□□ -0.91
USP8-210ENST00000560379 LINC00528Q8N1L1 170 aa9.36□□□□□ -0.91
USP8-210ENST00000560379 DNMT3LQ9UJW3 386 aa9.36□□□□□ -0.91
USP8-210ENST00000560379 POM121CA8CG34 1229 aa9.35□□□□□ -0.91
USP8-210ENST00000560379 BPHLQ86WA6 291 aaPredicted RBP9.35□□□□□ -0.91
USP8-210ENST00000560379 GLMNQ92990 594 aa9.35□□□□□ -0.91
USP8-210ENST00000560379 SOS2Q07890 1332 aaPredicted RBP9.34□□□□□ -0.91
USP8-210ENST00000560379 SOGA1O94964 1423 aa9.34□□□□□ -0.91
USP8-210ENST00000560379 PATL2C9JE40 543 aaKnown RBP9.34□□□□□ -0.91
USP8-210ENST00000560379 MAN1A2O60476 641 aa9.34□□□□□ -0.91
USP8-210ENST00000560379 LILRB3O75022 631 aa9.34□□□□□ -0.91
USP8-210ENST00000560379 IGSF3O75054 1194 aa9.34□□□□□ -0.91
USP8-210ENST00000560379 FSHRP23945 695 aa9.34□□□□□ -0.91
USP8-210ENST00000560379 ABL2P42684 1182 aa9.34□□□□□ -0.91
USP8-210ENST00000560379 GSK3AP49840 483 aa9.34□□□□□ -0.91
USP8-210ENST00000560379 AGERQ15109 404 aa9.34□□□□□ -0.91
USP8-210ENST00000560379 SH3BP5LQ7L8J4 393 aa9.34□□□□□ -0.91
USP8-210ENST00000560379 PBRM1Q86U86 1689 aa9.34□□□□□ -0.91
USP8-210ENST00000560379 ZNF608Q9ULD9 1512 aaPredicted RBP9.34□□□□□ -0.91
USP8-210ENST00000560379 CDK11BP21127 795 aaKnown RBP9.33□□□□□ -0.92
USP8-210ENST00000560379 KRT76Q01546 638 aa9.33□□□□□ -0.92
USP8-210ENST00000560379 RTL5Q5HYW3 569 aaPredicted RBP9.33□□□□□ -0.92
USP8-210ENST00000560379 CDK11AQ9UQ88 783 aaPredicted RBP9.33□□□□□ -0.92
USP8-210ENST00000560379 LOC100996750A0A140TA64 210 aa9.32□□□□□ -0.92
USP8-210ENST00000560379 BMP2P12643 396 aa9.32□□□□□ -0.92
USP8-210ENST00000560379 TUSC1Q2TAM9 212 aa9.32□□□□□ -0.92
USP8-210ENST00000560379 KRTAP4-6Q9BYQ5 205 aa9.32□□□□□ -0.92
USP8-210ENST00000560379 MAP4K5Q9Y4K4 846 aa9.32□□□□□ -0.92
USP8-210ENST00000560379 RAD54L2Q9Y4B4 1467 aa9.32□□□□□ -0.92
USP8-210ENST00000560379 TRMT44Q8IYL2 757 aaKnown RBP9.31□□□□□ -0.92
USP8-210ENST00000560379 TSC1Q92574 1164 aa9.31□□□□□ -0.92
USP8-210ENST00000560379 PRM3Q9NNZ6 103 aa9.31□□□□□ -0.92
USP8-210ENST00000560379 MAGI1Q96QZ7 1491 aaPredicted RBP9.3□□□□□ -0.92
USP8-210ENST00000560379 BRD1O95696 1058 aa9.3□□□□□ -0.92
USP8-210ENST00000560379 KCNA1Q09470 495 aa9.3□□□□□ -0.92
USP8-210ENST00000560379 GPR161Q8N6U8 529 aaKnown RBP9.3□□□□□ -0.92
USP8-210ENST00000560379 PBXIP1Q96AQ6 731 aa9.3□□□□□ -0.92
USP8-210ENST00000560379 TBC1D2BQ9UPU7 963 aa9.3□□□□□ -0.92
USP8-210ENST00000560379 GRIN2BQ13224 1484 aa9.28□□□□□ -0.92
USP8-210ENST00000560379 ERICH3Q5RHP9 1530 aa9.28□□□□□ -0.92
USP8-210ENST00000560379 E9PSI1 815 aa9.28□□□□□ -0.92
USP8-210ENST00000560379 SOCS7O14512 581 aa9.28□□□□□ -0.92
USP8-210ENST00000560379 HSP90B1P14625 803 aaKnown RBP9.28□□□□□ -0.92
USP8-210ENST00000560379 GAPVD1Q14C86 1478 aa9.28□□□□□ -0.92
USP8-210ENST00000560379 MAGEB6P1A0A0J9YX57 407 aa9.27□□□□□ -0.93
USP8-210ENST00000560379 NUTM2BA6NNL0 878 aaPredicted RBP9.27□□□□□ -0.93
USP8-210ENST00000560379 NUTM2EB1AL46 878 aaPredicted RBP9.27□□□□□ -0.93
USP8-210ENST00000560379 ERFEQ4G0M1 354 aa9.27□□□□□ -0.93
USP8-210ENST00000560379 NUTM2DQ5VT03 806 aaPredicted RBP9.27□□□□□ -0.93
USP8-210ENST00000560379 VASH1Q7L8A9 365 aaPredicted RBP9.27□□□□□ -0.93
USP8-210ENST00000560379 NUTM2AQ8IVF1 878 aaPredicted RBP9.27□□□□□ -0.93
USP8-210ENST00000560379 USTQ9Y2C2 406 aa9.27□□□□□ -0.93
USP8-210ENST00000560379 ADAMTS12P58397 1594 aa9.27□□□□□ -0.93
USP8-210ENST00000560379 AQRO60306 1485 aaKnown RBP eCLIP9.27□□□□□ -0.93
USP8-210ENST00000560379 CHD1O14646 1710 aa9.26□□□□□ -0.93
USP8-210ENST00000560379 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.26□□□□□ -0.93
USP8-210ENST00000560379 RFX1P22670 979 aa9.26□□□□□ -0.93
USP8-210ENST00000560379 NBPF14Q5TI25 921 aa9.26□□□□□ -0.93
USP8-210ENST00000560379 CCDC116Q8IYX3 515 aa9.26□□□□□ -0.93
USP8-210ENST00000560379 CSB-PGBD3P0DP91 1061 aa9.25□□□□□ -0.93
USP8-210ENST00000560379 CBLBQ13191 982 aa9.25□□□□□ -0.93
USP8-210ENST00000560379 ARMC2Q8NEN0 867 aa9.25□□□□□ -0.93
USP8-210ENST00000560379 CARD14Q9BXL6 1004 aa9.25□□□□□ -0.93
USP8-210ENST00000560379 SNAPC4Q5SXM2 1469 aa9.25□□□□□ -0.93
USP8-210ENST00000560379 CUL7Q14999 1698 aa9.25□□□□□ -0.93
USP8-210ENST00000560379 AP1G2O75843 785 aa9.24□□□□□ -0.93
USP8-210ENST00000560379 UPP2O95045 317 aa9.24□□□□□ -0.93
USP8-210ENST00000560379 HDGFL1Q5TGJ6 251 aa9.24□□□□□ -0.93
USP8-210ENST00000560379 TSEN34Q9BSV6 310 aaKnown RBP9.24□□□□□ -0.93
USP8-210ENST00000560379 EMILIN1Q9Y6C2 1016 aa9.24□□□□□ -0.93
USP8-210ENST00000560379 TDRD9Q8NDG6 1382 aaKnown RBP9.24□□□□□ -0.93
USP8-210ENST00000560379 SYNJ2O15056 1496 aa9.23□□□□□ -0.93
USP8-210ENST00000560379 TTLL8A6PVC2 850 aa9.23□□□□□ -0.93
USP8-210ENST00000560379 PTSQ03393 145 aa9.23□□□□□ -0.93
USP8-210ENST00000560379 KCNMA1Q12791 1236 aa9.23□□□□□ -0.93
USP8-210ENST00000560379 PPP1R26Q5T8A7 1209 aaPredicted RBP9.23□□□□□ -0.93
USP8-210ENST00000560379 Q6ZVU0 165 aa9.23□□□□□ -0.93
USP8-210ENST00000560379 SRPK2P78362 688 aaKnown RBP9.22□□□□□ -0.93
USP8-210ENST00000560379 CTDSPL2Q05D32 466 aa9.22□□□□□ -0.93
USP8-210ENST00000560379 CFAP70Q5T0N1 1121 aa9.22□□□□□ -0.93
USP8-210ENST00000560379 HELBQ8NG08 1087 aaPredicted RBP9.22□□□□□ -0.93
USP8-210ENST00000560379 ADAMTS19Q8TE59 1207 aa9.22□□□□□ -0.93
USP8-210ENST00000560379 OCSTAMPQ9BR26 566 aa9.22□□□□□ -0.93
USP8-210ENST00000560379 KIF27Q86VH2 1401 aa9.22□□□□□ -0.93
USP8-210ENST00000560379 CARNS1A5YM72 827 aa9.21□□□□□ -0.94
USP8-210ENST00000560379 FIGNL2A6NMB9 653 aa9.21□□□□□ -0.94
USP8-210ENST00000560379 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.21□□□□□ -0.94
USP8-210ENST00000560379 RNFT1Q5M7Z0 435 aa9.21□□□□□ -0.94
USP8-210ENST00000560379 CNTNAP3BQ96NU0 1288 aa9.21□□□□□ -0.94
USP8-210ENST00000560379 PUS7Q96PZ0 661 aaKnown RBP9.21□□□□□ -0.94
USP8-210ENST00000560379 CNTNAP3Q9BZ76 1288 aa9.21□□□□□ -0.94
USP8-210ENST00000560379 SPINT1O43278 529 aa9.2□□□□□ -0.94
USP8-210ENST00000560379 USP17L8P0C7I0 530 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms