RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 TCP11L2Q8N4U5 519 aa12.23□□□□□ -0.45
HMG20A-209ENST00000559728 USHBP1Q8N6Y0 703 aa12.23□□□□□ -0.45
HMG20A-209ENST00000559728 USP35Q9P2H5 1018 aa12.23□□□□□ -0.45
HMG20A-209ENST00000559728 SSUH2Q9Y2M2 353 aa12.23□□□□□ -0.45
HMG20A-209ENST00000559728 SOCS7O14512 581 aa12.22□□□□□ -0.45
HMG20A-209ENST00000559728 FAM98CQ17RN3 349 aaKnown RBP12.22□□□□□ -0.45
HMG20A-209ENST00000559728 CCDC184Q52MB2 194 aa12.22□□□□□ -0.45
HMG20A-209ENST00000559728 NLRP2Q9NX02 1062 aa12.22□□□□□ -0.45
HMG20A-209ENST00000559728 THRAP3Q9Y2W1 955 aaKnown RBP12.22□□□□□ -0.45
HMG20A-209ENST00000559728 FAM208AQ9UK61 1670 aaKnown RBP12.22□□□□□ -0.45
HMG20A-209ENST00000559728 MAP2P11137 1827 aaKnown RBP12.21□□□□□ -0.45
HMG20A-209ENST00000559728 THSD7AQ9UPZ6 1657 aa12.2□□□□□ -0.46
HMG20A-209ENST00000559728 AEBP1Q8IUX7 1158 aa12.2□□□□□ -0.46
HMG20A-209ENST00000559728 CCDC9Q9Y3X0 531 aaKnown RBP12.2□□□□□ -0.46
HMG20A-209ENST00000559728 MEGF6O75095 1541 aa12.2□□□□□ -0.46
HMG20A-209ENST00000559728 RGPD1P0DJD0 1748 aa12.2□□□□□ -0.46
HMG20A-209ENST00000559728 KDRP35968 1356 aa12.19□□□□□ -0.46
HMG20A-209ENST00000559728 DIAPH1O60610 1272 aaKnown RBP12.19□□□□□ -0.46
HMG20A-209ENST00000559728 SEPT12Q8IYM1 358 aa12.19□□□□□ -0.46
HMG20A-209ENST00000559728 AKT1S1Q96B36 256 aa12.19□□□□□ -0.46
HMG20A-209ENST00000559728 ANP32CO43423 234 aa12.17□□□□□ -0.46
HMG20A-209ENST00000559728 IL2RBP14784 551 aa12.17□□□□□ -0.46
HMG20A-209ENST00000559728 SULT6B1Q6IMI4 303 aa12.16□□□□□ -0.46
HMG20A-209ENST00000559728 OVOS2A0A0G2JMS6 1433 aa12.16□□□□□ -0.46
HMG20A-209ENST00000559728 RGPD2P0DJD1 1756 aa12.15□□□□□ -0.46
HMG20A-209ENST00000559728 DIEXFQ68CQ4 756 aaKnown RBP12.15□□□□□ -0.46
HMG20A-209ENST00000559728 CFAP53Q96M91 514 aa12.15□□□□□ -0.46
HMG20A-209ENST00000559728 CDCA7Q9BWT1 371 aaPredicted RBP12.15□□□□□ -0.46
HMG20A-209ENST00000559728 HMOX1P09601 288 aa12.14□□□□□ -0.47
HMG20A-209ENST00000559728 MARCH10Q8NA82 808 aaPredicted RBP12.14□□□□□ -0.47
HMG20A-209ENST00000559728 RSPH6AQ9H0K4 717 aa12.14□□□□□ -0.47
HMG20A-209ENST00000559728 LRRC37A3O60309 1634 aa12.14□□□□□ -0.47
HMG20A-209ENST00000559728 TNS2Q63HR2 1409 aa12.13□□□□□ -0.47
HMG20A-209ENST00000559728 U2SURPO15042 1029 aaKnown RBP12.13□□□□□ -0.47
HMG20A-209ENST00000559728 FAM182BQ5T319 152 aa12.13□□□□□ -0.47
HMG20A-209ENST00000559728 PARP4Q9UKK3 1724 aaKnown RBP12.13□□□□□ -0.47
HMG20A-209ENST00000559728 WNK3Q9BYP7 1800 aa12.12□□□□□ -0.47
HMG20A-209ENST00000559728 CYP27B1O15528 508 aa12.12□□□□□ -0.47
HMG20A-209ENST00000559728 TATP17735 454 aaPredicted RBP12.12□□□□□ -0.47
HMG20A-209ENST00000559728 DDB1Q16531 1140 aa12.12□□□□□ -0.47
HMG20A-209ENST00000559728 KRT27Q7Z3Y8 459 aa12.12□□□□□ -0.47
HMG20A-209ENST00000559728 RAPGEF4Q8WZA2 1011 aa12.12□□□□□ -0.47
HMG20A-209ENST00000559728 PHACTR3Q96KR7 559 aa12.12□□□□□ -0.47
HMG20A-209ENST00000559728 PLEKHF1Q96S99 279 aa12.12□□□□□ -0.47
HMG20A-209ENST00000559728 PLEKHG2Q9H7P9 1386 aa12.12□□□□□ -0.47
HMG20A-209ENST00000559728 EXOC5O00471 708 aa12.11□□□□□ -0.47
HMG20A-209ENST00000559728 U2AF1L5P0DN76 240 aaPredicted RBP12.11□□□□□ -0.47
HMG20A-209ENST00000559728 U2AF1Q01081 240 aaKnown RBP eCLIP12.11□□□□□ -0.47
HMG20A-209ENST00000559728 MIER1Q8N108 512 aa12.11□□□□□ -0.47
HMG20A-209ENST00000559728 ZCRB1Q8TBF4 217 aaKnown RBP12.11□□□□□ -0.47
HMG20A-209ENST00000559728 PNISRQ8TF01 805 aaKnown RBP12.11□□□□□ -0.47
HMG20A-209ENST00000559728 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.11□□□□□ -0.47
HMG20A-209ENST00000559728 FCHSD2O94868 740 aa12.1□□□□□ -0.47
HMG20A-209ENST00000559728 REM2Q8IYK8 340 aaPredicted RBP12.1□□□□□ -0.47
HMG20A-209ENST00000559728 ADAMTS8Q9UP79 889 aa12.1□□□□□ -0.47
HMG20A-209ENST00000559728 NUDCQ9Y266 331 aa12.1□□□□□ -0.47
HMG20A-209ENST00000559728 BCL9O00512 1426 aa12.1□□□□□ -0.47
HMG20A-209ENST00000559728 EP400Q96L91 3159 aa12.09□□□□□ -0.47
HMG20A-209ENST00000559728 A0A0G2JS52 829 aa12.09□□□□□ -0.47
HMG20A-209ENST00000559728 PRKAR2BP31323 418 aa12.09□□□□□ -0.47
HMG20A-209ENST00000559728 MYT1Q01538 1121 aa12.09□□□□□ -0.47
HMG20A-209ENST00000559728 MTHFSDQ2M296 383 aaKnown RBP12.09□□□□□ -0.47
HMG20A-209ENST00000559728 SHANK3Q9BYB0 1731 aa12.08□□□□□ -0.47
HMG20A-209ENST00000559728 PHKG2P15735 406 aa12.08□□□□□ -0.48
HMG20A-209ENST00000559728 PDE3BQ13370 1112 aa12.08□□□□□ -0.48
HMG20A-209ENST00000559728 NKX1-1Q15270 411 aaPredicted RBP12.08□□□□□ -0.48
HMG20A-209ENST00000559728 PTF1AQ7RTS3 328 aa12.08□□□□□ -0.48
HMG20A-209ENST00000559728 DDX54Q8TDD1 881 aaKnown RBP12.08□□□□□ -0.48
HMG20A-209ENST00000559728 PKD1L3Q7Z443 1732 aa12.08□□□□□ -0.48
HMG20A-209ENST00000559728 BRWD3Q6RI45 1802 aa12.07□□□□□ -0.48
HMG20A-209ENST00000559728 MRS2Q9HD23 443 aa12.07□□□□□ -0.48
HMG20A-209ENST00000559728 CCER2I3L3R5 266 aa12.06□□□□□ -0.48
HMG20A-209ENST00000559728 AMOTQ4VCS5 1084 aa12.06□□□□□ -0.48
HMG20A-209ENST00000559728 PLEKHO1Q53GL0 409 aaPredicted RBP12.06□□□□□ -0.48
HMG20A-209ENST00000559728 SPG7Q9UQ90 795 aa12.06□□□□□ -0.48
HMG20A-209ENST00000559728 CLEC11AQ9Y240 323 aa12.06□□□□□ -0.48
HMG20A-209ENST00000559728 PCDH11XQ9BZA7 1347 aa12.06□□□□□ -0.48
HMG20A-209ENST00000559728 PCDH11YQ9BZA8 1340 aa12.06□□□□□ -0.48
HMG20A-209ENST00000559728 KDM6AO15550 1401 aaPredicted RBP12.05□□□□□ -0.48
HMG20A-209ENST00000559728 PROM2Q8N271 834 aa12.05□□□□□ -0.48
HMG20A-209ENST00000559728 KCNQ2O43526 872 aa12.04□□□□□ -0.48
HMG20A-209ENST00000559728 ZNF530Q6P9A1 599 aaPredicted RBP12.04□□□□□ -0.48
HMG20A-209ENST00000559728 FAM196AQ6ZSG2 479 aa12.04□□□□□ -0.48
HMG20A-209ENST00000559728 CCDC146Q8IYE0 955 aa12.04□□□□□ -0.48
HMG20A-209ENST00000559728 IFNL2Q8IZJ0 200 aa12.04□□□□□ -0.48
HMG20A-209ENST00000559728 WDR43Q15061 677 aaKnown RBP eCLIP12.03□□□□□ -0.48
HMG20A-209ENST00000559728 AKAP4Q5JQC9 854 aa12.03□□□□□ -0.48
HMG20A-209ENST00000559728 UPF1Q92900 1129 aaKnown RBP eCLIP12.03□□□□□ -0.48
HMG20A-209ENST00000559728 LGR6Q9HBX8 967 aa12.03□□□□□ -0.48
HMG20A-209ENST00000559728 IL17REQ8NFR9 667 aa12.02□□□□□ -0.49
HMG20A-209ENST00000559728 RUNDC1Q96C34 613 aa12.02□□□□□ -0.49
HMG20A-209ENST00000559728 ACSBG1Q96GR2 724 aa12.02□□□□□ -0.49
HMG20A-209ENST00000559728 TRIM37O94972 964 aa12.01□□□□□ -0.49
HMG20A-209ENST00000559728 NFE2L2Q16236 605 aa12.01□□□□□ -0.49
HMG20A-209ENST00000559728 MPRIPQ6WCQ1 1025 aa12.01□□□□□ -0.49
HMG20A-209ENST00000559728 SPDYE1Q8NFV5 336 aaPredicted RBP12.01□□□□□ -0.49
HMG20A-209ENST00000559728 GAS2L2Q8NHY3 880 aa12.01□□□□□ -0.49
HMG20A-209ENST00000559728 TOGARAM1Q9Y4F4 1720 aa12□□□□□ -0.49
HMG20A-209ENST00000559728 RNMTO43148 476 aaKnown RBP12□□□□□ -0.49
HMG20A-209ENST00000559728 TMPOP42166 694 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms