RNA–Protein interactions for RNA: ENST00000559201.5

LRRC49-215, Transcript of leucine rich repeat containing 49, human

TSL 3

Gene LRRC49, Length 938 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-215	ENST00000559201	PEAK1	Q9H792	1746 aa		13.62	□□□□□ -0.23
LRRC49-215	ENST00000559201	TMEM94	Q12767	1356 aa		13.62	□□□□□ -0.23
LRRC49-215	ENST00000559201	HDAC1	Q13547	482 aa	Predicted RBP	13.62	□□□□□ -0.23
LRRC49-215	ENST00000559201	AMOT	Q4VCS5	1084 aa		13.62	□□□□□ -0.23
LRRC49-215	ENST00000559201	ARHGEF25	Q86VW2	580 aa		13.62	□□□□□ -0.23
LRRC49-215	ENST00000559201	THUMPD2	Q9BTF0	503 aa	Known RBP	13.62	□□□□□ -0.23
LRRC49-215	ENST00000559201	USP19	O94966	1318 aa		13.62	□□□□□ -0.23
LRRC49-215	ENST00000559201	RBM33	Q96EV2	1170 aa	Known RBP	13.61	□□□□□ -0.23
LRRC49-215	ENST00000559201	KIF1A	Q12756	1690 aa		13.6	□□□□□ -0.23
LRRC49-215	ENST00000559201	FAM83G	A6ND36	823 aa		13.6	□□□□□ -0.23
LRRC49-215	ENST00000559201	ANP32A	P39687	249 aa	Known RBP	13.6	□□□□□ -0.23
LRRC49-215	ENST00000559201	CRB1	P82279	1406 aa		13.6	□□□□□ -0.23
LRRC49-215	ENST00000559201	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.6	□□□□□ -0.23
LRRC49-215	ENST00000559201	ITPRIP	Q8IWB1	547 aa		13.6	□□□□□ -0.23
LRRC49-215	ENST00000559201	C8orf58	Q8NAV2	365 aa		13.6	□□□□□ -0.23
LRRC49-215	ENST00000559201	PTPRC	P08575	1304 aa		13.6	□□□□□ -0.23
LRRC49-215	ENST00000559201	NPHP3	Q7Z494	1330 aa		13.6	□□□□□ -0.23
LRRC49-215	ENST00000559201	MSH6	P52701	1360 aa		13.59	□□□□□ -0.23
LRRC49-215	ENST00000559201	RGPD8	O14715	1765 aa	Predicted RBP	13.59	□□□□□ -0.23
LRRC49-215	ENST00000559201	IGHD	P01880	384 aa		13.59	□□□□□ -0.23
LRRC49-215	ENST00000559201	DCTN1	Q14203	1278 aa		13.59	□□□□□ -0.23
LRRC49-215	ENST00000559201	FAM161A	Q3B820	660 aa		13.59	□□□□□ -0.23
LRRC49-215	ENST00000559201	ILDR2	Q71H61	639 aa		13.59	□□□□□ -0.23
LRRC49-215	ENST00000559201	TMEM57	Q8N5G2	664 aa		13.59	□□□□□ -0.23
LRRC49-215	ENST00000559201	ZBTB40	Q9NUA8	1239 aa		13.59	□□□□□ -0.23
LRRC49-215	ENST00000559201	TAF7	Q15545	349 aa	Predicted RBP	13.58	□□□□□ -0.24
LRRC49-215	ENST00000559201	MCM10	Q7L590	875 aa		13.58	□□□□□ -0.24
LRRC49-215	ENST00000559201	TSPYL6	Q8N831	410 aa		13.58	□□□□□ -0.24
LRRC49-215	ENST00000559201	TSPYL4	Q9UJ04	414 aa		13.58	□□□□□ -0.24
LRRC49-215	ENST00000559201	PCDHB15	Q9Y5E8	787 aa		13.58	□□□□□ -0.24
LRRC49-215	ENST00000559201	SLIT3	O75094	1523 aa		13.58	□□□□□ -0.24
LRRC49-215	ENST00000559201	NFAT5	O94916	1531 aa		13.58	□□□□□ -0.24
LRRC49-215	ENST00000559201	MAP3K5	Q99683	1374 aa		13.58	□□□□□ -0.24
LRRC49-215	ENST00000559201	PLEKHG2	Q9H7P9	1386 aa		13.58	□□□□□ -0.24
LRRC49-215	ENST00000559201	LTV1	Q96GA3	475 aa	Predicted RBP	13.57	□□□□□ -0.24
LRRC49-215	ENST00000559201	TNN	Q9UQP3	1299 aa		13.56	□□□□□ -0.24
LRRC49-215	ENST00000559201	ABCC4	O15439	1325 aa		13.56	□□□□□ -0.24
LRRC49-215	ENST00000559201	PHRF1	Q9P1Y6	1649 aa	Known RBP	13.55	□□□□□ -0.24
LRRC49-215	ENST00000559201	ELL2	O00472	640 aa	Predicted RBP	13.55	□□□□□ -0.24
LRRC49-215	ENST00000559201	ZBTB7B	O15156	539 aa	Predicted RBP	13.55	□□□□□ -0.24
LRRC49-215	ENST00000559201	AKAP4	Q5JQC9	854 aa		13.55	□□□□□ -0.24
LRRC49-215	ENST00000559201	NBPF6	Q5VWK0	638 aa		13.55	□□□□□ -0.24
LRRC49-215	ENST00000559201	LMOD2	Q6P5Q4	547 aa		13.55	□□□□□ -0.24
LRRC49-215	ENST00000559201	NBPF4	Q96M43	638 aa		13.55	□□□□□ -0.24
LRRC49-215	ENST00000559201	CCDC30	Q5VVM6	783 aa		13.54	□□□□□ -0.24
LRRC49-215	ENST00000559201	INTS3	Q68E01	1043 aa	Known RBP	13.54	□□□□□ -0.24
LRRC49-215	ENST00000559201	ANKRD24	Q8TF21	1146 aa		13.54	□□□□□ -0.24
LRRC49-215	ENST00000559201	HOXB7	P09629	217 aa		13.53	□□□□□ -0.24
LRRC49-215	ENST00000559201	SMC5	Q8IY18	1101 aa		13.53	□□□□□ -0.24
LRRC49-215	ENST00000559201	GCC1	Q96CN9	775 aa		13.53	□□□□□ -0.24
LRRC49-215	ENST00000559201	STK31	Q9BXU1	1019 aa		13.53	□□□□□ -0.24
LRRC49-215	ENST00000559201	NCAPD2	Q15021	1401 aa		13.53	□□□□□ -0.24
LRRC49-215	ENST00000559201	HSPA2	P54652	639 aa		13.52	□□□□□ -0.25
LRRC49-215	ENST00000559201	IL17RE	Q8NFR9	667 aa		13.52	□□□□□ -0.25
LRRC49-215	ENST00000559201	IPO9	Q96P70	1041 aa	Known RBP	13.52	□□□□□ -0.25
LRRC49-215	ENST00000559201	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
LRRC49-215	ENST00000559201	MARF1	Q9Y4F3	1742 aa	Known RBP	13.51	□□□□□ -0.25
LRRC49-215	ENST00000559201	OVOS2	A0A0G2JMS6	1433 aa		13.51	□□□□□ -0.25
LRRC49-215	ENST00000559201	CEMIP	Q8WUJ3	1361 aa		13.51	□□□□□ -0.25
LRRC49-215	ENST00000559201	RGS3	P49796	1198 aa		13.51	□□□□□ -0.25
LRRC49-215	ENST00000559201	CCT4	P50991	539 aa	Known RBP	13.51	□□□□□ -0.25
LRRC49-215	ENST00000559201	C1orf141	Q5JVX7	400 aa		13.51	□□□□□ -0.25
LRRC49-215	ENST00000559201	DDRGK1	Q96HY6	314 aa		13.51	□□□□□ -0.25
LRRC49-215	ENST00000559201	PDZRN3	Q9UPQ7	1066 aa		13.51	□□□□□ -0.25
LRRC49-215	ENST00000559201	SPATA31A3	Q5VYP0	1347 aa		13.5	□□□□□ -0.25
LRRC49-215	ENST00000559201	ZBTB7C	A1YPR0	619 aa		13.5	□□□□□ -0.25
LRRC49-215	ENST00000559201	EIF5B	O60841	1220 aa	Known RBP	13.5	□□□□□ -0.25
LRRC49-215	ENST00000559201	SLC4A2	P04920	1241 aa		13.5	□□□□□ -0.25
LRRC49-215	ENST00000559201	XPC	Q01831	940 aa	Predicted RBP	13.5	□□□□□ -0.25
LRRC49-215	ENST00000559201	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.5	□□□□□ -0.25
LRRC49-215	ENST00000559201	ABCC6	O95255	1503 aa		13.49	□□□□□ -0.25
LRRC49-215	ENST00000559201	TNS3	Q68CZ2	1445 aa		13.49	□□□□□ -0.25
LRRC49-215	ENST00000559201	TEF	Q10587	303 aa		13.49	□□□□□ -0.25
LRRC49-215	ENST00000559201	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.49	□□□□□ -0.25
LRRC49-215	ENST00000559201	ERICH6	Q7L0X2	663 aa		13.49	□□□□□ -0.25
LRRC49-215	ENST00000559201	CPD	O75976	1380 aa		13.48	□□□□□ -0.25
LRRC49-215	ENST00000559201	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.48	□□□□□ -0.25
LRRC49-215	ENST00000559201	SLAIN2	Q9P270	581 aa		13.48	□□□□□ -0.25
LRRC49-215	ENST00000559201	DLG5	Q8TDM6	1919 aa		13.47	□□□□□ -0.25
LRRC49-215	ENST00000559201	TAT	P17735	454 aa	Predicted RBP	13.47	□□□□□ -0.25
LRRC49-215	ENST00000559201	NUCB1	Q02818	461 aa		13.47	□□□□□ -0.25
LRRC49-215	ENST00000559201	C8orf34	Q49A92	452 aa		13.47	□□□□□ -0.25
LRRC49-215	ENST00000559201	USHBP1	Q8N6Y0	703 aa		13.47	□□□□□ -0.25
LRRC49-215	ENST00000559201	RAPGEF4	Q8WZA2	1011 aa		13.47	□□□□□ -0.25
LRRC49-215	ENST00000559201	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.47	□□□□□ -0.25
LRRC49-215	ENST00000559201	SPG7	Q9UQ90	795 aa		13.47	□□□□□ -0.25
LRRC49-215	ENST00000559201	ERBB3	P21860	1342 aa		13.46	□□□□□ -0.25
LRRC49-215	ENST00000559201	RNMT	O43148	476 aa	Known RBP	13.46	□□□□□ -0.25
LRRC49-215	ENST00000559201	MIS18A	Q9NYP9	233 aa		13.46	□□□□□ -0.25
LRRC49-215	ENST00000559201	SOS2	Q07890	1332 aa	Predicted RBP	13.45	□□□□□ -0.26
LRRC49-215	ENST00000559201	HSP90AB1	P08238	724 aa	Known RBP	13.45	□□□□□ -0.26
LRRC49-215	ENST00000559201	ZC3H6	P61129	1189 aa	Known RBP	13.45	□□□□□ -0.26
LRRC49-215	ENST00000559201	BRINP3	Q76B58	766 aa		13.45	□□□□□ -0.26
LRRC49-215	ENST00000559201	LRRC59	Q96AG4	307 aa	Known RBP	13.45	□□□□□ -0.26
LRRC49-215	ENST00000559201	UPF2	Q9HAU5	1272 aa	Known RBP	13.45	□□□□□ -0.26
LRRC49-215	ENST00000559201	AXIN2	Q9Y2T1	843 aa		13.45	□□□□□ -0.26
LRRC49-215	ENST00000559201	HMMR	O75330	724 aa		13.44	□□□□□ -0.26
LRRC49-215	ENST00000559201	GNAI3	P08754	354 aa		13.44	□□□□□ -0.26
LRRC49-215	ENST00000559201	EIF4A1	P60842	406 aa	Known RBP	13.44	□□□□□ -0.26
LRRC49-215	ENST00000559201	PXDN	Q92626	1479 aa		13.43	□□□□□ -0.26

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