RNA–Protein interactions for RNA: ENST00000559177.5

TRPM1-209, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 5

Gene TRPM1, Length 1,627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-209ENST00000559177 EYA1Q99502 592 aa13.97□□□□□ -0.17
TRPM1-209ENST00000559177 TNS2Q63HR2 1409 aa13.97□□□□□ -0.17
TRPM1-209ENST00000559177 NEFLP07196 543 aa13.97□□□□□ -0.17
TRPM1-209ENST00000559177 MEGF6O75095 1541 aa13.97□□□□□ -0.17
TRPM1-209ENST00000559177 OVOS2A0A0G2JMS6 1433 aa13.96□□□□□ -0.17
TRPM1-209ENST00000559177 MTHFSP49914 203 aa13.96□□□□□ -0.17
TRPM1-209ENST00000559177 DDX54Q8TDD1 881 aaKnown RBP13.96□□□□□ -0.17
TRPM1-209ENST00000559177 HNRNPUQ00839 825 aaKnown RBP eCLIP13.95□□□□□ -0.18
TRPM1-209ENST00000559177 RAPGEF4Q8WZA2 1011 aa13.95□□□□□ -0.18
TRPM1-209ENST00000559177 TATP17735 454 aaPredicted RBP13.94□□□□□ -0.18
TRPM1-209ENST00000559177 MRS2Q9HD23 443 aa13.94□□□□□ -0.18
TRPM1-209ENST00000559177 RGPD1P0DJD0 1748 aa13.94□□□□□ -0.18
TRPM1-209ENST00000559177 PTF1AQ7RTS3 328 aa13.93□□□□□ -0.18
TRPM1-209ENST00000559177 ZCRB1Q8TBF4 217 aaKnown RBP13.93□□□□□ -0.18
TRPM1-209ENST00000559177 APBA3O96018 575 aa13.93□□□□□ -0.18
TRPM1-209ENST00000559177 EN1Q05925 392 aaPredicted RBP13.93□□□□□ -0.18
TRPM1-209ENST00000559177 TNS1Q9HBL0 1735 aaKnown RBP13.92□□□□□ -0.18
TRPM1-209ENST00000559177 BAG6P46379 1132 aa13.92□□□□□ -0.18
TRPM1-209ENST00000559177 ACSBG1Q96GR2 724 aa13.92□□□□□ -0.18
TRPM1-209ENST00000559177 NCAPD2Q15021 1401 aa13.91□□□□□ -0.18
TRPM1-209ENST00000559177 IL13P35225 146 aa13.91□□□□□ -0.18
TRPM1-209ENST00000559177 IGSF1Q8N6C5 1336 aa13.91□□□□□ -0.18
TRPM1-209ENST00000559177 SBF2Q86WG5 1849 aa13.91□□□□□ -0.18
TRPM1-209ENST00000559177 KCNQ2O43526 872 aa13.9□□□□□ -0.18
TRPM1-209ENST00000559177 BCL9O00512 1426 aa13.9□□□□□ -0.18
TRPM1-209ENST00000559177 ZBED9Q6R2W3 1325 aa13.9□□□□□ -0.18
TRPM1-209ENST00000559177 EZH2Q15910 746 aaKnown RBP13.9□□□□□ -0.19
TRPM1-209ENST00000559177 AEBP1Q8IUX7 1158 aa13.9□□□□□ -0.19
TRPM1-209ENST00000559177 BCL11BQ9C0K0 894 aaPredicted RBP13.9□□□□□ -0.19
TRPM1-209ENST00000559177 SHANK3Q9BYB0 1731 aa13.9□□□□□ -0.19
TRPM1-209ENST00000559177 PPP2R1AP30153 589 aa13.89□□□□□ -0.19
TRPM1-209ENST00000559177 DIAPH1O60610 1272 aaKnown RBP13.88□□□□□ -0.19
TRPM1-209ENST00000559177 FKBP8Q14318 412 aa13.88□□□□□ -0.19
TRPM1-209ENST00000559177 RALBP1Q15311 655 aa13.88□□□□□ -0.19
TRPM1-209ENST00000559177 CCDC184Q52MB2 194 aa13.88□□□□□ -0.19
TRPM1-209ENST00000559177 SULT6B1Q6IMI4 303 aa13.88□□□□□ -0.19
TRPM1-209ENST00000559177 CYP27B1O15528 508 aa13.87□□□□□ -0.19
TRPM1-209ENST00000559177 CAMKK2Q96RR4 588 aa13.87□□□□□ -0.19
TRPM1-209ENST00000559177 PCDH11XQ9BZA7 1347 aa13.87□□□□□ -0.19
TRPM1-209ENST00000559177 PCDH11YQ9BZA8 1340 aa13.87□□□□□ -0.19
TRPM1-209ENST00000559177 SPG7Q9UQ90 795 aa13.86□□□□□ -0.19
TRPM1-209ENST00000559177 HMOX1P09601 288 aa13.86□□□□□ -0.19
TRPM1-209ENST00000559177 PRIM1P49642 420 aaKnown RBP13.86□□□□□ -0.19
TRPM1-209ENST00000559177 SYTL4Q96C24 671 aaPredicted RBP13.86□□□□□ -0.19
TRPM1-209ENST00000559177 COL3A1P02461 1466 aaPredicted RBP13.86□□□□□ -0.19
TRPM1-209ENST00000559177 NHSQ6T4R5 1651 aa13.85□□□□□ -0.19
TRPM1-209ENST00000559177 PKD1L3Q7Z443 1732 aa13.85□□□□□ -0.19
TRPM1-209ENST00000559177 ERICH6BQ5W0A0 696 aa13.85□□□□□ -0.19
TRPM1-209ENST00000559177 FAM9BQ8IZU0 186 aa13.85□□□□□ -0.19
TRPM1-209ENST00000559177 PARD3Q8TEW0 1356 aa13.85□□□□□ -0.19
TRPM1-209ENST00000559177 U2SURPO15042 1029 aaKnown RBP13.84□□□□□ -0.19
TRPM1-209ENST00000559177 CFAP53Q96M91 514 aa13.84□□□□□ -0.19
TRPM1-209ENST00000559177 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.84□□□□□ -0.19
TRPM1-209ENST00000559177 KAT6BQ8WYB5 2073 aa13.84□□□□□ -0.19
TRPM1-209ENST00000559177 MYBBP1AQ9BQG0 1328 aaKnown RBP13.83□□□□□ -0.2
TRPM1-209ENST00000559177 DOT1LQ8TEK3 1739 aa13.83□□□□□ -0.2
TRPM1-209ENST00000559177 KDRP35968 1356 aa13.83□□□□□ -0.2
TRPM1-209ENST00000559177 PLSCR1O15162 318 aa13.82□□□□□ -0.2
TRPM1-209ENST00000559177 PHKG2P15735 406 aa13.82□□□□□ -0.2
TRPM1-209ENST00000559177 PLEKHO1Q53GL0 409 aaPredicted RBP13.82□□□□□ -0.2
TRPM1-209ENST00000559177 IFNL2Q8IZJ0 200 aa13.82□□□□□ -0.2
TRPM1-209ENST00000559177 ZNF530Q6P9A1 599 aaPredicted RBP13.81□□□□□ -0.2
TRPM1-209ENST00000559177 PROM2Q8N271 834 aa13.81□□□□□ -0.2
TRPM1-209ENST00000559177 BTAF1O14981 1849 aa13.81□□□□□ -0.2
TRPM1-209ENST00000559177 NKX1-1Q15270 411 aaPredicted RBP13.8□□□□□ -0.2
TRPM1-209ENST00000559177 AMOTQ4VCS5 1084 aa13.8□□□□□ -0.2
TRPM1-209ENST00000559177 MPRIPQ6WCQ1 1025 aa13.8□□□□□ -0.2
TRPM1-209ENST00000559177 RREB1Q92766 1687 aa13.8□□□□□ -0.2
TRPM1-209ENST00000559177 PSDA5PKW4 1024 aaPredicted RBP13.79□□□□□ -0.2
TRPM1-209ENST00000559177 TXNRD1Q16881 649 aa13.79□□□□□ -0.2
TRPM1-209ENST00000559177 PNISRQ8TF01 805 aaKnown RBP13.79□□□□□ -0.2
TRPM1-209ENST00000559177 PPP4R3CPQ6ZMV5 832 aa13.79□□□□□ -0.2
TRPM1-209ENST00000559177 NUDCQ9Y266 331 aa13.79□□□□□ -0.2
TRPM1-209ENST00000559177 TOGARAM1Q9Y4F4 1720 aa13.79□□□□□ -0.2
TRPM1-209ENST00000559177 PLEKHG2Q9H7P9 1386 aa13.78□□□□□ -0.2
TRPM1-209ENST00000559177 NUP188Q5SRE5 1749 aa13.78□□□□□ -0.2
TRPM1-209ENST00000559177 U2AF1L5P0DN76 240 aaPredicted RBP13.78□□□□□ -0.2
TRPM1-209ENST00000559177 U2AF1Q01081 240 aaKnown RBP eCLIP13.78□□□□□ -0.2
TRPM1-209ENST00000559177 RGPD3A6NKT7 1758 aaPredicted RBP13.77□□□□□ -0.2
TRPM1-209ENST00000559177 RGPD4Q7Z3J3 1758 aa13.77□□□□□ -0.2
TRPM1-209ENST00000559177 R3HDM1Q15032 1099 aaKnown RBP13.77□□□□□ -0.21
TRPM1-209ENST00000559177 MTHFSDQ2M296 383 aaKnown RBP13.77□□□□□ -0.21
TRPM1-209ENST00000559177 C1orf141Q5JVX7 400 aa13.77□□□□□ -0.21
TRPM1-209ENST00000559177 KCNQ4P56696 695 aa13.76□□□□□ -0.21
TRPM1-209ENST00000559177 PIGBQ92521 554 aa13.76□□□□□ -0.21
TRPM1-209ENST00000559177 PRKAR2BP31323 418 aa13.75□□□□□ -0.21
TRPM1-209ENST00000559177 NBPF14Q5TI25 921 aa13.75□□□□□ -0.21
TRPM1-209ENST00000559177 DCAF5Q96JK2 942 aa13.75□□□□□ -0.21
TRPM1-209ENST00000559177 RSPH6AQ9H0K4 717 aa13.75□□□□□ -0.21
TRPM1-209ENST00000559177 LRRC4BQ9NT99 713 aa13.75□□□□□ -0.21
TRPM1-209ENST00000559177 ITGB4P16144 1822 aa13.75□□□□□ -0.21
TRPM1-209ENST00000559177 HSP90AB1P08238 724 aaKnown RBP13.75□□□□□ -0.21
TRPM1-209ENST00000559177 ANO8Q9HCE9 1232 aaPredicted RBP13.75□□□□□ -0.21
TRPM1-209ENST00000559177 TMOD3Q9NYL9 352 aa13.75□□□□□ -0.21
TRPM1-209ENST00000559177 KDM6AO15550 1401 aaPredicted RBP13.75□□□□□ -0.21
TRPM1-209ENST00000559177 AKAP4Q5JQC9 854 aa13.74□□□□□ -0.21
TRPM1-209ENST00000559177 PHACTR3Q96KR7 559 aa13.74□□□□□ -0.21
TRPM1-209ENST00000559177 LGR6Q9HBX8 967 aa13.73□□□□□ -0.21
TRPM1-209ENST00000559177 ERVV-2B6SEH9 535 aa13.72□□□□□ -0.21
TRPM1-209ENST00000559177 CABP4P57796 275 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms