RNA–Protein interactions for RNA: ENST00000559105.5

USP50-204, Transcript of ubiquitin specific peptidase 50, humanhuman

TSL 5

Gene USP50, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP50-204ENST00000559105 DACH1Q9UI36 760 aa11.43□□□□□ -0.58
USP50-204ENST00000559105 NOD1Q9Y239 953 aa11.43□□□□□ -0.58
USP50-204ENST00000559105 USP17L5A8MUK1 530 aa11.42□□□□□ -0.58
USP50-204ENST00000559105 PTGIRP43119 386 aa11.42□□□□□ -0.58
USP50-204ENST00000559105 SCTRP47872 440 aa11.42□□□□□ -0.58
USP50-204ENST00000559105 RELBQ01201 579 aa11.42□□□□□ -0.58
USP50-204ENST00000559105 PURBQ96QR8 312 aaKnown RBP11.42□□□□□ -0.58
USP50-204ENST00000559105 UCN2Q96RP3 112 aa11.42□□□□□ -0.58
USP50-204ENST00000559105 GNRH1P01148 92 aa11.41□□□□□ -0.58
USP50-204ENST00000559105 C6orf118Q5T5N4 469 aa11.41□□□□□ -0.58
USP50-204ENST00000559105 TBC1D9Q6ZT07 1266 aa11.41□□□□□ -0.58
USP50-204ENST00000559105 TRIM50Q86XT4 487 aa11.41□□□□□ -0.58
USP50-204ENST00000559105 ZFP42Q96MM3 310 aa11.41□□□□□ -0.58
USP50-204ENST00000559105 PPP1R12CQ9BZL4 782 aa11.41□□□□□ -0.58
USP50-204ENST00000559105 TFIP11Q9UBB9 837 aaKnown RBP11.41□□□□□ -0.58
USP50-204ENST00000559105 CCDC97Q96F63 343 aaPredicted RBP11.4□□□□□ -0.58
USP50-204ENST00000559105 AGBL1Q96MI9 1066 aa11.4□□□□□ -0.58
USP50-204ENST00000559105 OSBPL3Q9H4L5 887 aa11.4□□□□□ -0.58
USP50-204ENST00000559105 USP17L3A6NCW0 530 aa11.39□□□□□ -0.59
USP50-204ENST00000559105 USP17L4A6NCW7 530 aa11.39□□□□□ -0.59
USP50-204ENST00000559105 PALM3A6NDB9 673 aaPredicted RBP11.39□□□□□ -0.59
USP50-204ENST00000559105 C11orf95C9JLR9 678 aaPredicted RBP11.39□□□□□ -0.59
USP50-204ENST00000559105 SPINT1O43278 529 aa11.39□□□□□ -0.59
USP50-204ENST00000559105 NCOA4Q13772 614 aa11.39□□□□□ -0.59
USP50-204ENST00000559105 ESCO1Q5FWF5 840 aa11.39□□□□□ -0.59
USP50-204ENST00000559105 USP17L2Q6R6M4 530 aa11.39□□□□□ -0.59
USP50-204ENST00000559105 USP17L1Q7RTZ2 530 aa11.39□□□□□ -0.59
USP50-204ENST00000559105 TRIM47Q96LD4 638 aa11.39□□□□□ -0.59
USP50-204ENST00000559105 GMPR2Q9P2T1 348 aaKnown RBP11.39□□□□□ -0.59
USP50-204ENST00000559105 SERPINA10Q9UK55 444 aa11.39□□□□□ -0.59
USP50-204ENST00000559105 ZNF787Q6DD87 383 aa11.38□□□□□ -0.59
USP50-204ENST00000559105 NLRP3Q96P20 1036 aa11.38□□□□□ -0.59
USP50-204ENST00000559105 TIMELESSQ9UNS1 1208 aa11.38□□□□□ -0.59
USP50-204ENST00000559105 ATP1A2P50993 1020 aa11.37□□□□□ -0.59
USP50-204ENST00000559105 MAFBQ9Y5Q3 323 aaPredicted RBP11.37□□□□□ -0.59
USP50-204ENST00000559105 DEPDC4Q8N2C3 294 aa11.36□□□□□ -0.59
USP50-204ENST00000559105 ZNF395Q9H8N7 513 aaPredicted RBP11.36□□□□□ -0.59
USP50-204ENST00000559105 A0A1W2PRU2 124 aa11.35□□□□□ -0.59
USP50-204ENST00000559105 POLMQ9NP87 494 aaPredicted RBP11.35□□□□□ -0.59
USP50-204ENST00000559105 TTLL8A6PVC2 850 aa11.34□□□□□ -0.59
USP50-204ENST00000559105 MEN1O00255 615 aa11.34□□□□□ -0.59
USP50-204ENST00000559105 LMOD1P29536 600 aaPredicted RBP11.34□□□□□ -0.59
USP50-204ENST00000559105 GPC1P35052 558 aa11.34□□□□□ -0.59
USP50-204ENST00000559105 KDF1Q8NAX2 398 aaPredicted RBP11.34□□□□□ -0.59
USP50-204ENST00000559105 MKRN1Q9UHC7 482 aaKnown RBP11.34□□□□□ -0.59
USP50-204ENST00000559105 ARID3CA6NKF2 412 aa11.33□□□□□ -0.6
USP50-204ENST00000559105 MAN1A2O60476 641 aa11.33□□□□□ -0.6
USP50-204ENST00000559105 GTF2IP78347 998 aa11.33□□□□□ -0.6
USP50-204ENST00000559105 PSME1Q06323 249 aa11.33□□□□□ -0.6
USP50-204ENST00000559105 CLN3Q13286 438 aa11.33□□□□□ -0.6
USP50-204ENST00000559105 INSM2Q96T92 566 aaPredicted RBP11.33□□□□□ -0.6
USP50-204ENST00000559105 ARHGEF10LQ9HCE6 1279 aa11.33□□□□□ -0.6
USP50-204ENST00000559105 RBM19Q9Y4C8 960 aaKnown RBP11.33□□□□□ -0.6
USP50-204ENST00000559105 SOS2Q07890 1332 aaPredicted RBP11.33□□□□□ -0.6
USP50-204ENST00000559105 VRTNQ9H8Y1 702 aa11.32□□□□□ -0.6
USP50-204ENST00000559105 GTF2E1P29083 439 aaPredicted RBP11.31□□□□□ -0.6
USP50-204ENST00000559105 RNF144AP50876 292 aaPredicted RBP11.31□□□□□ -0.6
USP50-204ENST00000559105 XAGE2Q96GT9 111 aa11.31□□□□□ -0.6
USP50-204ENST00000559105 ESYT1Q9BSJ8 1104 aa11.31□□□□□ -0.6
USP50-204ENST00000559105 PCDHGA11Q9Y5H2 935 aa11.31□□□□□ -0.6
USP50-204ENST00000559105 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.3□□□□□ -0.6
USP50-204ENST00000559105 LARP1Q6PKG0 1096 aaKnown RBP11.3□□□□□ -0.6
USP50-204ENST00000559105 LARGE2Q8N3Y3 721 aa11.3□□□□□ -0.6
USP50-204ENST00000559105 CNKSR1Q969H4 720 aa11.3□□□□□ -0.6
USP50-204ENST00000559105 BACH1O14867 736 aa11.29□□□□□ -0.6
USP50-204ENST00000559105 CTSOP43234 321 aaPredicted RBP11.29□□□□□ -0.6
USP50-204ENST00000559105 DNAAF2Q9NVR5 837 aaKnown RBP11.29□□□□□ -0.6
USP50-204ENST00000559105 POTECB2RU33 542 aa11.28□□□□□ -0.6
USP50-204ENST00000559105 WASLO00401 505 aaPredicted RBP11.28□□□□□ -0.6
USP50-204ENST00000559105 INHAP05111 366 aa11.28□□□□□ -0.6
USP50-204ENST00000559105 SNRPBP14678 240 aaKnown RBP11.28□□□□□ -0.6
USP50-204ENST00000559105 RASA1P20936 1047 aa11.28□□□□□ -0.6
USP50-204ENST00000559105 GDF10P55107 478 aa11.28□□□□□ -0.6
USP50-204ENST00000559105 SLC27A3Q5K4L6 730 aa11.28□□□□□ -0.6
USP50-204ENST00000559105 CFAP70Q5T0N1 1121 aa11.28□□□□□ -0.6
USP50-204ENST00000559105 OGFOD1Q8N543 542 aa11.28□□□□□ -0.6
USP50-204ENST00000559105 RAB6BQ9NRW1 208 aa11.27□□□□□ -0.61
USP50-204ENST00000559105 IL2RAP01589 272 aa11.26□□□□□ -0.61
USP50-204ENST00000559105 LYSMD3Q7Z3D4 306 aa11.26□□□□□ -0.61
USP50-204ENST00000559105 RNF217Q8TC41 542 aa11.26□□□□□ -0.61
USP50-204ENST00000559105 ETNK1Q9HBU6 452 aa11.26□□□□□ -0.61
USP50-204ENST00000559105 FIGNL2A6NMB9 653 aa11.25□□□□□ -0.61
USP50-204ENST00000559105 RFX1P22670 979 aa11.25□□□□□ -0.61
USP50-204ENST00000559105 CENPCQ03188 943 aa11.25□□□□□ -0.61
USP50-204ENST00000559105 KANK4Q5T7N3 995 aaPredicted RBP11.25□□□□□ -0.61
USP50-204ENST00000559105 CCDC102BQ68D86 513 aa11.25□□□□□ -0.61
USP50-204ENST00000559105 SCNN1DP51172 638 aa11.24□□□□□ -0.61
USP50-204ENST00000559105 CCDC82Q8N4S0 544 aa11.24□□□□□ -0.61
USP50-204ENST00000559105 ZSCAN10Q96SZ4 725 aaPredicted RBP11.24□□□□□ -0.61
USP50-204ENST00000559105 DNMT3LQ9UJW3 386 aa11.24□□□□□ -0.61
USP50-204ENST00000559105 FAM196BA6NMK8 535 aa11.23□□□□□ -0.61
USP50-204ENST00000559105 SUPT5HO00267 1087 aaKnown RBP11.23□□□□□ -0.61
USP50-204ENST00000559105 CLDN10P78369 228 aa11.23□□□□□ -0.61
USP50-204ENST00000559105 FOXD4L5Q5VV16 416 aaPredicted RBP11.23□□□□□ -0.61
USP50-204ENST00000559105 TPCN2Q8NHX9 752 aa11.23□□□□□ -0.61
USP50-204ENST00000559105 SLC4A9Q96Q91 983 aa11.23□□□□□ -0.61
USP50-204ENST00000559105 GRIP2Q9C0E4 1043 aa11.23□□□□□ -0.61
USP50-204ENST00000559105 ZBTB7BO15156 539 aaPredicted RBP11.22□□□□□ -0.61
USP50-204ENST00000559105 TLR1Q15399 786 aa11.22□□□□□ -0.61
USP50-204ENST00000559105 GNASQ5JWF2 1037 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms