RNA–Protein interactions for RNA: ENST00000559105.5

USP50-204, Transcript of ubiquitin specific peptidase 50, humanhuman

TSL 5

Gene USP50, Length 725 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP50-204ENST00000559105 AEBP2Q6ZN18 517 aaPredicted RBP30.7■■■□□ 2.51
USP50-204ENST00000559105 CHIC1Q5VXU3 224 aa30.14■■■□□ 2.42
USP50-204ENST00000559105 PHF23Q9BUL5 403 aaPredicted RBP26.4■■□□□ 1.82
USP50-204ENST00000559105 SENP3Q9H4L4 574 aaPredicted RBP26.24■■□□□ 1.79
USP50-204ENST00000559105 PLPPR3Q6T4P5 718 aa24.56■■□□□ 1.52
USP50-204ENST00000559105 FOXD1Q16676 465 aa24.23■■□□□ 1.47
USP50-204ENST00000559105 ADRA2BP18089 450 aa23.29■■□□□ 1.32
USP50-204ENST00000559105 PPP6R1Q9UPN7 881 aa23.27■■□□□ 1.32
USP50-204ENST00000559105 PIAS4Q8N2W9 510 aaPredicted RBP22.92■■□□□ 1.26
USP50-204ENST00000559105 MSH5O43196 834 aa22.49■■□□□ 1.19
USP50-204ENST00000559105 PPP4R3CPQ6ZMV5 832 aa21.58■■□□□ 1.05
USP50-204ENST00000559105 SCAF1Q9H7N4 1312 aaKnown RBP21.55■■□□□ 1.04
USP50-204ENST00000559105 NCBP3Q53F19 620 aaKnown RBP21.17■□□□□ 0.98
USP50-204ENST00000559105 MAPK8IP2Q13387 824 aaPredicted RBP21.1■□□□□ 0.97
USP50-204ENST00000559105 KCNA4P22459 653 aa21.04■□□□□ 0.96
USP50-204ENST00000559105 CNKSR2Q8WXI2 1034 aa21.03■□□□□ 0.96
USP50-204ENST00000559105 DMRT2Q9Y5R5 561 aa20.9■□□□□ 0.94
USP50-204ENST00000559105 NPM3O75607 178 aaKnown RBP20.68■□□□□ 0.9
USP50-204ENST00000559105 RNF216Q9NWF9 866 aaPredicted RBP20.61■□□□□ 0.89
USP50-204ENST00000559105 HOXD11P31277 338 aaPredicted RBP20.48■□□□□ 0.87
USP50-204ENST00000559105 POTEDQ86YR6 584 aa20.29■□□□□ 0.84
USP50-204ENST00000559105 DNAJC5BQ9UF47 199 aa20.17■□□□□ 0.82
USP50-204ENST00000559105 SLC4A1APQ9BWU0 796 aaKnown RBP20.13■□□□□ 0.81
USP50-204ENST00000559105 DCAF8L1A6NGE4 600 aa20.02■□□□□ 0.8
USP50-204ENST00000559105 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.58■□□□□ 0.72
USP50-204ENST00000559105 EHMT2Q96KQ7 1210 aa19.52■□□□□ 0.72
USP50-204ENST00000559105 SLC4A2P04920 1241 aa19.48■□□□□ 0.71
USP50-204ENST00000559105 FOXD4L1Q9NU39 408 aa19.46■□□□□ 0.71
USP50-204ENST00000559105 ZBTB22O15209 634 aa19.28■□□□□ 0.68
USP50-204ENST00000559105 CSRNP3Q8WYN3 585 aa19.27■□□□□ 0.68
USP50-204ENST00000559105 MYCNP04198 464 aaPredicted RBP19.2■□□□□ 0.66
USP50-204ENST00000559105 RNF39Q9H2S5 420 aa19.18■□□□□ 0.66
USP50-204ENST00000559105 U3KPZ7 1027 aaPredicted RBP19.16■□□□□ 0.66
USP50-204ENST00000559105 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.14■□□□□ 0.65
USP50-204ENST00000559105 HNRNPUL2Q1KMD3 747 aaKnown RBP19.14■□□□□ 0.65
USP50-204ENST00000559105 C1QBPQ07021 282 aaKnown RBP19.04■□□□□ 0.64
USP50-204ENST00000559105 SAMD1Q6SPF0 538 aaPredicted RBP19.02■□□□□ 0.64
USP50-204ENST00000559105 APLP2Q06481 763 aa18.98■□□□□ 0.63
USP50-204ENST00000559105 ATXN8OSP0DMR3 200 aa18.84■□□□□ 0.61
USP50-204ENST00000559105 CACNB1Q02641 598 aaPredicted RBP18.71■□□□□ 0.59
USP50-204ENST00000559105 CAPN15O75808 1086 aa18.62■□□□□ 0.57
USP50-204ENST00000559105 ZNF219Q9P2Y4 722 aaPredicted RBP18.59■□□□□ 0.57
USP50-204ENST00000559105 SPINK5Q9NQ38 1064 aaPredicted RBP18.58■□□□□ 0.56
USP50-204ENST00000559105 TRHP20396 242 aaPredicted RBP18.51■□□□□ 0.55
USP50-204ENST00000559105 ATF5Q9Y2D1 282 aaPredicted RBP18.51■□□□□ 0.55
USP50-204ENST00000559105 DSG3P32926 999 aa18.24■□□□□ 0.51
USP50-204ENST00000559105 POLA2Q14181 598 aa18.22■□□□□ 0.51
USP50-204ENST00000559105 ABCB7O75027 752 aa18.18■□□□□ 0.5
USP50-204ENST00000559105 ZBTB12Q9Y330 459 aaPredicted RBP18.06■□□□□ 0.48
USP50-204ENST00000559105 FBLN2P98095 1184 aa17.97■□□□□ 0.47
USP50-204ENST00000559105 MKRN4PQ13434 485 aaPredicted RBP17.73■□□□□ 0.43
USP50-204ENST00000559105 OSCARQ8IYS5 282 aa17.55■□□□□ 0.4
USP50-204ENST00000559105 RBM42Q9BTD8 480 aaKnown RBP17.53■□□□□ 0.4
USP50-204ENST00000559105 SPDYE2BA6NHP3 402 aa17.5■□□□□ 0.39
USP50-204ENST00000559105 SPDYE6P0CI01 402 aa17.5■□□□□ 0.39
USP50-204ENST00000559105 SPDYE2Q495Y8 402 aa17.5■□□□□ 0.39
USP50-204ENST00000559105 SPDYE4A6NLX3 237 aa17.47■□□□□ 0.39
USP50-204ENST00000559105 FKBP8Q14318 412 aa17.47■□□□□ 0.39
USP50-204ENST00000559105 ZNF692Q9BU19 519 aaPredicted RBP17.42■□□□□ 0.38
USP50-204ENST00000559105 SSUH2Q9Y2M2 353 aa17.3■□□□□ 0.36
USP50-204ENST00000559105 AKT1S1Q96B36 256 aa17.27■□□□□ 0.36
USP50-204ENST00000559105 PABPN1Q86U42 306 aaKnown RBP eCLIP17.15■□□□□ 0.34
USP50-204ENST00000559105 PROM2Q8N271 834 aa17.13■□□□□ 0.33
USP50-204ENST00000559105 REM2Q8IYK8 340 aaPredicted RBP17.04■□□□□ 0.32
USP50-204ENST00000559105 STAG3Q9UJ98 1225 aa17.01■□□□□ 0.31
USP50-204ENST00000559105 SPDYE1Q8NFV5 336 aaPredicted RBP17■□□□□ 0.31
USP50-204ENST00000559105 FBXO3Q9UK99 471 aa17■□□□□ 0.31
USP50-204ENST00000559105 CLEC11AQ9Y240 323 aa16.86■□□□□ 0.29
USP50-204ENST00000559105 PITPNM1O00562 1244 aa16.81■□□□□ 0.28
USP50-204ENST00000559105 PRR29P0C7W0 189 aa16.76■□□□□ 0.27
USP50-204ENST00000559105 CHRDL2Q6WN34 429 aa16.69■□□□□ 0.26
USP50-204ENST00000559105 PLEKHG5O94827 1062 aa16.65■□□□□ 0.26
USP50-204ENST00000559105 VASPP50552 380 aaPredicted RBP16.64■□□□□ 0.25
USP50-204ENST00000559105 MIER1Q8N108 512 aa16.6■□□□□ 0.25
USP50-204ENST00000559105 PLCD3Q8N3E9 789 aa16.59■□□□□ 0.25
USP50-204ENST00000559105 FXR2P51116 673 aaKnown RBP eCLIP16.52■□□□□ 0.24
USP50-204ENST00000559105 ZBTB47Q9UFB7 747 aaPredicted RBP16.5■□□□□ 0.23
USP50-204ENST00000559105 PIP4P2Q8N4L2 257 aa16.45■□□□□ 0.22
USP50-204ENST00000559105 CREBZFQ9NS37 354 aa16.45■□□□□ 0.22
USP50-204ENST00000559105 PRKAR2AP13861 404 aaKnown RBP16.43■□□□□ 0.22
USP50-204ENST00000559105 KLHL34Q8N239 644 aa16.42■□□□□ 0.22
USP50-204ENST00000559105 IFNLR1Q8IU57 520 aaPredicted RBP16.36■□□□□ 0.21
USP50-204ENST00000559105 CHADLQ6NUI6 762 aa16.35■□□□□ 0.21
USP50-204ENST00000559105 NPM1P06748 294 aaKnown RBP eCLIP16.34■□□□□ 0.21
USP50-204ENST00000559105 FARP1Q9Y4F1 1045 aaPredicted RBP16.3■□□□□ 0.2
USP50-204ENST00000559105 SPOCK2Q92563 424 aa16.27■□□□□ 0.2
USP50-204ENST00000559105 MNX1P50219 401 aaPredicted RBP16.24■□□□□ 0.19
USP50-204ENST00000559105 POTEHQ6S545 545 aa16.12■□□□□ 0.17
USP50-204ENST00000559105 NUBP1P53384 320 aa16.09■□□□□ 0.17
USP50-204ENST00000559105 PAK3O75914 559 aaPredicted RBP16.07■□□□□ 0.16
USP50-204ENST00000559105 FAM212AQ96EL1 285 aa16.07■□□□□ 0.16
USP50-204ENST00000559105 GSE1Q14687 1217 aa16.05■□□□□ 0.16
USP50-204ENST00000559105 AMER1Q5JTC6 1135 aaPredicted RBP16.05■□□□□ 0.16
USP50-204ENST00000559105 DCAF8Q5TAQ9 597 aa16.02■□□□□ 0.16
USP50-204ENST00000559105 RASEFQ8IZ41 740 aa16■□□□□ 0.15
USP50-204ENST00000559105 CIZ1Q9ULV3 898 aaPredicted RBP15.99■□□□□ 0.15
USP50-204ENST00000559105 HAX1O00165 279 aa15.98■□□□□ 0.15
USP50-204ENST00000559105 CD44P16070 742 aaKnown RBP15.97■□□□□ 0.15
USP50-204ENST00000559105 C19orf67A6NJJ6 358 aa15.96■□□□□ 0.15
USP50-204ENST00000559105 TSPYL2Q9H2G4 693 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms