RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 PRDM11Q9NQV5 511 aa8.47□□□□□ -1.05
CTDSPL2-204ENST00000558966 BTG4Q9NY30 223 aa8.47□□□□□ -1.05
CTDSPL2-204ENST00000558966 ARIH1Q9Y4X5 557 aaPredicted RBP8.47□□□□□ -1.05
CTDSPL2-204ENST00000558966 KTN1Q86UP2 1357 aaKnown RBP8.47□□□□□ -1.05
CTDSPL2-204ENST00000558966 TTC21BQ7Z4L5 1316 aa8.47□□□□□ -1.05
CTDSPL2-204ENST00000558966 CHRNA2Q15822 529 aa8.47□□□□□ -1.05
CTDSPL2-204ENST00000558966 NLRP13Q86W25 1043 aa8.47□□□□□ -1.05
CTDSPL2-204ENST00000558966 PUS7Q96PZ0 661 aaKnown RBP8.47□□□□□ -1.05
CTDSPL2-204ENST00000558966 CPDO75976 1380 aa8.46□□□□□ -1.05
CTDSPL2-204ENST00000558966 ATMINO43313 823 aaPredicted RBP8.46□□□□□ -1.06
CTDSPL2-204ENST00000558966 DSG2Q14126 1118 aa8.46□□□□□ -1.06
CTDSPL2-204ENST00000558966 SLC12A5Q9H2X9 1139 aa8.46□□□□□ -1.06
CTDSPL2-204ENST00000558966 USP54Q70EL1 1684 aa8.46□□□□□ -1.06
CTDSPL2-204ENST00000558966 BRWD3Q6RI45 1802 aa8.46□□□□□ -1.06
CTDSPL2-204ENST00000558966 A0A1W2PP64 1363 aa8.46□□□□□ -1.06
CTDSPL2-204ENST00000558966 TTC21AQ8NDW8 1320 aa8.45□□□□□ -1.06
CTDSPL2-204ENST00000558966 CAMTA1Q9Y6Y1 1673 aa8.45□□□□□ -1.06
CTDSPL2-204ENST00000558966 GCP02774 474 aa8.45□□□□□ -1.06
CTDSPL2-204ENST00000558966 TMC1Q8TDI8 760 aa8.45□□□□□ -1.06
CTDSPL2-204ENST00000558966 IRX5P78411 483 aaPredicted RBP8.45□□□□□ -1.06
CTDSPL2-204ENST00000558966 UPF1Q92900 1129 aaKnown RBP eCLIP8.45□□□□□ -1.06
CTDSPL2-204ENST00000558966 EDC4Q6P2E9 1401 aaKnown RBP8.44□□□□□ -1.06
CTDSPL2-204ENST00000558966 NINLQ9Y2I6 1382 aa8.44□□□□□ -1.06
CTDSPL2-204ENST00000558966 NFAT5O94916 1531 aa8.44□□□□□ -1.06
CTDSPL2-204ENST00000558966 COL18A1P39060 1754 aa8.44□□□□□ -1.06
CTDSPL2-204ENST00000558966 CCDC9Q9Y3X0 531 aaKnown RBP8.44□□□□□ -1.06
CTDSPL2-204ENST00000558966 MYOM1P52179 1685 aa8.44□□□□□ -1.06
CTDSPL2-204ENST00000558966 USP31Q70CQ4 1352 aa8.44□□□□□ -1.06
CTDSPL2-204ENST00000558966 SPATA31A5Q5VU36 1347 aa8.43□□□□□ -1.06
CTDSPL2-204ENST00000558966 SPATA31A7Q8IWB4 1347 aa8.43□□□□□ -1.06
CTDSPL2-204ENST00000558966 ONECUT3O60422 494 aaPredicted RBP8.43□□□□□ -1.06
CTDSPL2-204ENST00000558966 MLLT3P42568 568 aaPredicted RBP8.43□□□□□ -1.06
CTDSPL2-204ENST00000558966 CLCN6P51797 869 aa8.43□□□□□ -1.06
CTDSPL2-204ENST00000558966 TMF1P82094 1093 aa8.43□□□□□ -1.06
CTDSPL2-204ENST00000558966 SMYD5Q6GMV2 418 aa8.43□□□□□ -1.06
CTDSPL2-204ENST00000558966 ASTLQ6HA08 431 aaPredicted RBP8.43□□□□□ -1.06
CTDSPL2-204ENST00000558966 HDGFL2Q7Z4V5 671 aaPredicted RBP8.43□□□□□ -1.06
CTDSPL2-204ENST00000558966 EMILIN3Q9NT22 766 aa8.43□□□□□ -1.06
CTDSPL2-204ENST00000558966 THSD7AQ9UPZ6 1657 aa8.43□□□□□ -1.06
CTDSPL2-204ENST00000558966 DPYSL4O14531 572 aa8.43□□□□□ -1.06
CTDSPL2-204ENST00000558966 NME9Q86XW9 330 aa8.43□□□□□ -1.06
CTDSPL2-204ENST00000558966 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.43□□□□□ -1.062e-6■■■■□ 22.1
CTDSPL2-204ENST00000558966 TMC2Q8TDI7 906 aa8.43□□□□□ -1.06
CTDSPL2-204ENST00000558966 OCEL1Q9H607 264 aa8.43□□□□□ -1.06
CTDSPL2-204ENST00000558966 TERF2IPQ9NYB0 399 aa8.43□□□□□ -1.06
CTDSPL2-204ENST00000558966 COL5A2P05997 1499 aaPredicted RBP8.42□□□□□ -1.06
CTDSPL2-204ENST00000558966 OVOS2A0A0J9YW53 1432 aa8.42□□□□□ -1.06
CTDSPL2-204ENST00000558966 OVOS2Q6IE36 1432 aa8.42□□□□□ -1.06
CTDSPL2-204ENST00000558966 SEPT12Q8IYM1 358 aa8.42□□□□□ -1.06
CTDSPL2-204ENST00000558966 SLC24A3Q9HC58 644 aa8.42□□□□□ -1.06
CTDSPL2-204ENST00000558966 STRN4Q9NRL3 753 aa8.42□□□□□ -1.06
CTDSPL2-204ENST00000558966 AATKQ6ZMQ8 1374 aa8.42□□□□□ -1.06
CTDSPL2-204ENST00000558966 ANKRD36BQ8N2N9 1353 aa8.42□□□□□ -1.06
CTDSPL2-204ENST00000558966 SPATA31A1Q5TZJ5 1347 aa8.41□□□□□ -1.06
CTDSPL2-204ENST00000558966 FAM98CQ17RN3 349 aaKnown RBP8.41□□□□□ -1.06
CTDSPL2-204ENST00000558966 BOLA1Q9Y3E2 137 aa8.41□□□□□ -1.06
CTDSPL2-204ENST00000558966 RGPD5Q99666 1765 aa8.41□□□□□ -1.06
CTDSPL2-204ENST00000558966 ZBTB7CA1YPR0 619 aa8.4□□□□□ -1.06
CTDSPL2-204ENST00000558966 LARP1Q6PKG0 1096 aaKnown RBP8.4□□□□□ -1.06
CTDSPL2-204ENST00000558966 ARHGEF25Q86VW2 580 aa8.4□□□□□ -1.06
CTDSPL2-204ENST00000558966 KCNH5Q8NCM2 988 aa8.4□□□□□ -1.06
CTDSPL2-204ENST00000558966 LTN1O94822 1766 aa8.4□□□□□ -1.06
CTDSPL2-204ENST00000558966 HSPA5P11021 654 aaKnown RBP8.4□□□□□ -1.07
CTDSPL2-204ENST00000558966 RBM26Q5T8P6 1007 aaKnown RBP8.4□□□□□ -1.07
CTDSPL2-204ENST00000558966 AXIN2Q9Y2T1 843 aa8.4□□□□□ -1.07
CTDSPL2-204ENST00000558966 ABCC6O95255 1503 aa8.4□□□□□ -1.07
CTDSPL2-204ENST00000558966 C2orf72A6NCS6 295 aa8.39□□□□□ -1.07
CTDSPL2-204ENST00000558966 EIF4G2P78344 907 aaKnown RBP eCLIP8.39□□□□□ -1.07
CTDSPL2-204ENST00000558966 FOXK1P85037 733 aa8.39□□□□□ -1.07
CTDSPL2-204ENST00000558966 CDCA8Q53HL2 280 aa8.39□□□□□ -1.07
CTDSPL2-204ENST00000558966 IER5LQ5T953 404 aa8.39□□□□□ -1.07
CTDSPL2-204ENST00000558966 TMEM121BQ9BXQ6 578 aaPredicted RBP8.39□□□□□ -1.07
CTDSPL2-204ENST00000558966 A0A0G2JS52 829 aa8.38□□□□□ -1.07
CTDSPL2-204ENST00000558966 G3V3G9 751 aa8.38□□□□□ -1.07
CTDSPL2-204ENST00000558966 PLCG2P16885 1265 aa8.38□□□□□ -1.07
CTDSPL2-204ENST00000558966 BRPF1P55201 1214 aaPredicted RBP8.38□□□□□ -1.07
CTDSPL2-204ENST00000558966 EVA1CP58658 441 aa8.38□□□□□ -1.07
CTDSPL2-204ENST00000558966 MYT1Q01538 1121 aa8.38□□□□□ -1.07
CTDSPL2-204ENST00000558966 KRT27Q7Z3Y8 459 aa8.38□□□□□ -1.07
CTDSPL2-204ENST00000558966 PLPP6Q8IY26 295 aa8.38□□□□□ -1.07
CTDSPL2-204ENST00000558966 USP35Q9P2H5 1018 aa8.38□□□□□ -1.07
CTDSPL2-204ENST00000558966 CRB1P82279 1406 aa8.38□□□□□ -1.07
CTDSPL2-204ENST00000558966 KIF20BQ96Q89 1820 aa8.38□□□□□ -1.07
CTDSPL2-204ENST00000558966 GABBR2O75899 941 aa8.38□□□□□ -1.07
CTDSPL2-204ENST00000558966 WNK3Q9BYP7 1800 aa8.38□□□□□ -1.07
CTDSPL2-204ENST00000558966 PARP4Q9UKK3 1724 aaKnown RBP8.37□□□□□ -1.07
CTDSPL2-204ENST00000558966 ZMYND10O75800 440 aa8.37□□□□□ -1.07
CTDSPL2-204ENST00000558966 BARGINQ6ZT62 677 aa8.37□□□□□ -1.07
CTDSPL2-204ENST00000558966 TCP11L2Q8N4U5 519 aa8.37□□□□□ -1.07
CTDSPL2-204ENST00000558966 WDR17Q8IZU2 1322 aa8.37□□□□□ -1.07
CTDSPL2-204ENST00000558966 TMEM132AQ24JP5 1023 aa8.36□□□□□ -1.07
CTDSPL2-204ENST00000558966 PELP1Q8IZL8 1130 aaKnown RBP8.36□□□□□ -1.07
CTDSPL2-204ENST00000558966 CARD14Q9BXL6 1004 aa8.36□□□□□ -1.07
CTDSPL2-204ENST00000558966 LRRC37A3O60309 1634 aa8.36□□□□□ -1.07
CTDSPL2-204ENST00000558966 BLMP54132 1417 aaPredicted RBP8.36□□□□□ -1.07
CTDSPL2-204ENST00000558966 NSD3Q9BZ95 1437 aa8.36□□□□□ -1.07
CTDSPL2-204ENST00000558966 KIF3CO14782 793 aa8.36□□□□□ -1.07
CTDSPL2-204ENST00000558966 FYB1O15117 783 aa8.36□□□□□ -1.07
CTDSPL2-204ENST00000558966 FAM182BQ5T319 152 aa8.36□□□□□ -1.07
CTDSPL2-204ENST00000558966 COG3Q96JB2 828 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms