RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 LZTS3O60299 673 aaPredicted RBP7.75□□□□□ -1.17
VPS13C-207ENST00000558919 MYCP01106 439 aaPredicted RBP7.75□□□□□ -1.17
VPS13C-207ENST00000558919 SNRPBP14678 240 aaKnown RBP7.75□□□□□ -1.17
VPS13C-207ENST00000558919 RELBQ01201 579 aa7.75□□□□□ -1.17
VPS13C-207ENST00000558919 CYP2U1Q7Z449 544 aa7.75□□□□□ -1.17
VPS13C-207ENST00000558919 KDF1Q8NAX2 398 aaPredicted RBP7.75□□□□□ -1.17
VPS13C-207ENST00000558919 OSBPL3Q9H4L5 887 aa7.75□□□□□ -1.17
VPS13C-207ENST00000558919 PIK3CDO00329 1044 aa7.74□□□□□ -1.17
VPS13C-207ENST00000558919 GLMNQ92990 594 aa7.74□□□□□ -1.17
VPS13C-207ENST00000558919 SOS2Q07890 1332 aaPredicted RBP7.74□□□□□ -1.17
VPS13C-207ENST00000558919 SKIP12755 728 aa7.73□□□□□ -1.17
VPS13C-207ENST00000558919 ZNF395Q9H8N7 513 aaPredicted RBP7.73□□□□□ -1.17
VPS13C-207ENST00000558919 LOC100996750A0A140TA64 210 aa7.72□□□□□ -1.17
VPS13C-207ENST00000558919 TTLL8A6PVC2 850 aa7.72□□□□□ -1.17
VPS13C-207ENST00000558919 GNRH1P01148 92 aa7.72□□□□□ -1.17
VPS13C-207ENST00000558919 OXLD1Q5BKU9 147 aa7.72□□□□□ -1.17
VPS13C-207ENST00000558919 KRTAP4-6Q9BYQ5 205 aa7.72□□□□□ -1.17
VPS13C-207ENST00000558919 CALR3Q96L12 384 aaKnown RBP7.71□□□□□ -1.18
VPS13C-207ENST00000558919 UCN2Q96RP3 112 aa7.71□□□□□ -1.18
VPS13C-207ENST00000558919 INSM2Q96T92 566 aaPredicted RBP7.71□□□□□ -1.18
VPS13C-207ENST00000558919 A0A1W2PRU2 124 aa7.7□□□□□ -1.18
VPS13C-207ENST00000558919 ATP9BO43861 1147 aa7.7□□□□□ -1.18
VPS13C-207ENST00000558919 MAN1A2O60476 641 aa7.7□□□□□ -1.18
VPS13C-207ENST00000558919 CTSOP43234 321 aaPredicted RBP7.7□□□□□ -1.18
VPS13C-207ENST00000558919 EML3Q32P44 896 aa7.7□□□□□ -1.18
VPS13C-207ENST00000558919 POLMQ9NP87 494 aaPredicted RBP7.7□□□□□ -1.18
VPS13C-207ENST00000558919 ZNF777Q9ULD5 760 aaPredicted RBP7.7□□□□□ -1.18
VPS13C-207ENST00000558919 USP17L5A8MUK1 530 aa7.69□□□□□ -1.18
VPS13C-207ENST00000558919 GPC1P35052 558 aa7.69□□□□□ -1.18
VPS13C-207ENST00000558919 RNF144AP50876 292 aaPredicted RBP7.69□□□□□ -1.18
VPS13C-207ENST00000558919 CLN3Q13286 438 aa7.69□□□□□ -1.18
VPS13C-207ENST00000558919 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.69□□□□□ -1.18
VPS13C-207ENST00000558919 TBC1D9Q6ZT07 1266 aa7.69□□□□□ -1.18
VPS13C-207ENST00000558919 PLEKHM2Q8IWE5 1019 aa7.69□□□□□ -1.18
VPS13C-207ENST00000558919 DNMT3LQ9UJW3 386 aa7.69□□□□□ -1.18
VPS13C-207ENST00000558919 NCOA4Q13772 614 aa7.68□□□□□ -1.18
VPS13C-207ENST00000558919 FOXD4L5Q5VV16 416 aaPredicted RBP7.68□□□□□ -1.18
VPS13C-207ENST00000558919 RNF217Q8TC41 542 aa7.68□□□□□ -1.18
VPS13C-207ENST00000558919 ARHGEF10LQ9HCE6 1279 aa7.68□□□□□ -1.18
VPS13C-207ENST00000558919 NOD1Q9Y239 953 aa7.68□□□□□ -1.18
VPS13C-207ENST00000558919 SOBPA7XYQ1 873 aa7.67□□□□□ -1.18
VPS13C-207ENST00000558919 MEN1O00255 615 aa7.67□□□□□ -1.18
VPS13C-207ENST00000558919 ESCO1Q5FWF5 840 aa7.67□□□□□ -1.18
VPS13C-207ENST00000558919 NLRP3Q96P20 1036 aa7.67□□□□□ -1.18
VPS13C-207ENST00000558919 USP17L3A6NCW0 530 aa7.66□□□□□ -1.18
VPS13C-207ENST00000558919 USP17L4A6NCW7 530 aa7.66□□□□□ -1.18
VPS13C-207ENST00000558919 FIGNL2A6NMB9 653 aa7.66□□□□□ -1.18
VPS13C-207ENST00000558919 USP17L2Q6R6M4 530 aa7.66□□□□□ -1.18
VPS13C-207ENST00000558919 ERICH6Q7L0X2 663 aa7.66□□□□□ -1.18
VPS13C-207ENST00000558919 USP17L1Q7RTZ2 530 aa7.66□□□□□ -1.18
VPS13C-207ENST00000558919 C14orf37Q86TY3 774 aa7.66□□□□□ -1.18
VPS13C-207ENST00000558919 XAGE2Q96GT9 111 aa7.66□□□□□ -1.18
VPS13C-207ENST00000558919 ESYT1Q9BSJ8 1104 aa7.66□□□□□ -1.18
VPS13C-207ENST00000558919 PPP1R12CQ9BZL4 782 aa7.66□□□□□ -1.18
VPS13C-207ENST00000558919 TFIP11Q9UBB9 837 aaKnown RBP7.66□□□□□ -1.18
VPS13C-207ENST00000558919 PALM3A6NDB9 673 aaPredicted RBP7.65□□□□□ -1.18
VPS13C-207ENST00000558919 IL2RAP01589 272 aa7.65□□□□□ -1.18
VPS13C-207ENST00000558919 TRIM50Q86XT4 487 aa7.65□□□□□ -1.18
VPS13C-207ENST00000558919 NPAS3Q8IXF0 933 aa7.65□□□□□ -1.18
VPS13C-207ENST00000558919 DEPDC4Q8N2C3 294 aa7.65□□□□□ -1.18
VPS13C-207ENST00000558919 CNKSR1Q969H4 720 aa7.65□□□□□ -1.18
VPS13C-207ENST00000558919 RAB6BQ9NRW1 208 aa7.65□□□□□ -1.18
VPS13C-207ENST00000558919 NXF1Q9UBU9 619 aaKnown RBP7.65□□□□□ -1.18
VPS13C-207ENST00000558919 PCDHGA11Q9Y5H2 935 aa7.65□□□□□ -1.18
VPS13C-207ENST00000558919 WASLO00401 505 aaPredicted RBP7.64□□□□□ -1.19
VPS13C-207ENST00000558919 GTF2IP78347 998 aa7.64□□□□□ -1.19
VPS13C-207ENST00000558919 LYSMD3Q7Z3D4 306 aa7.64□□□□□ -1.19
VPS13C-207ENST00000558919 GRIP2Q9C0E4 1043 aa7.64□□□□□ -1.19
VPS13C-207ENST00000558919 ETNK1Q9HBU6 452 aa7.64□□□□□ -1.19
VPS13C-207ENST00000558919 HRH3Q9Y5N1 445 aa7.64□□□□□ -1.19
VPS13C-207ENST00000558919 MAFBQ9Y5Q3 323 aaPredicted RBP7.64□□□□□ -1.19
VPS13C-207ENST00000558919 TERTO14746 1132 aaKnown RBP7.63□□□□□ -1.19
VPS13C-207ENST00000558919 INHAP05111 366 aa7.63□□□□□ -1.19
VPS13C-207ENST00000558919 SCNN1DP51172 638 aa7.63□□□□□ -1.19
VPS13C-207ENST00000558919 GDF10P55107 478 aa7.63□□□□□ -1.19
VPS13C-207ENST00000558919 CENPCQ03188 943 aa7.63□□□□□ -1.19
VPS13C-207ENST00000558919 ATP1A2P50993 1020 aa7.62□□□□□ -1.19
VPS13C-207ENST00000558919 PTSQ03393 145 aa7.62□□□□□ -1.19
VPS13C-207ENST00000558919 SLC27A3Q5K4L6 730 aa7.62□□□□□ -1.19
VPS13C-207ENST00000558919 MKRN1Q9UHC7 482 aaKnown RBP7.62□□□□□ -1.19
VPS13C-207ENST00000558919 TMEM229AB2RXF0 380 aa7.61□□□□□ -1.19
VPS13C-207ENST00000558919 SPATA31C2B4DYI2 1134 aa7.61□□□□□ -1.19
VPS13C-207ENST00000558919 PRICKLE2Q7Z3G6 844 aa7.61□□□□□ -1.19
VPS13C-207ENST00000558919 FHDC1Q9C0D6 1143 aaPredicted RBP7.61□□□□□ -1.19
VPS13C-207ENST00000558919 SLC35F4A4IF30 521 aa7.6□□□□□ -1.19
VPS13C-207ENST00000558919 ZBTB7BO15156 539 aaPredicted RBP7.6□□□□□ -1.19
VPS13C-207ENST00000558919 STAU1O95793 577 aaKnown RBP7.6□□□□□ -1.19
VPS13C-207ENST00000558919 NFX1Q12986 1120 aaKnown RBP7.6□□□□□ -1.19
VPS13C-207ENST00000558919 WDR44Q5JSH3 913 aa7.6□□□□□ -1.19
VPS13C-207ENST00000558919 TREML4Q6UXN2 200 aa7.6□□□□□ -1.19
VPS13C-207ENST00000558919 SLC16A10Q8TF71 515 aa7.6□□□□□ -1.19
VPS13C-207ENST00000558919 SLC4A9Q96Q91 983 aa7.6□□□□□ -1.19
VPS13C-207ENST00000558919 ZSCAN10Q96SZ4 725 aaPredicted RBP7.6□□□□□ -1.19
VPS13C-207ENST00000558919 H3BM21 787 aa7.59□□□□□ -1.19
VPS13C-207ENST00000558919 GTF2E1P29083 439 aaPredicted RBP7.59□□□□□ -1.19
VPS13C-207ENST00000558919 LMOD1P29536 600 aaPredicted RBP7.59□□□□□ -1.19
VPS13C-207ENST00000558919 CLDN10P78369 228 aa7.59□□□□□ -1.19
VPS13C-207ENST00000558919 PSME1Q06323 249 aa7.59□□□□□ -1.19
VPS13C-207ENST00000558919 CFAP70Q5T0N1 1121 aa7.59□□□□□ -1.19
VPS13C-207ENST00000558919 LARGE2Q8N3Y3 721 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms