RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 GPR161Q8N6U8 529 aaKnown RBP8.3□□□□□ -1.08
CASC4-206ENST00000558847 FNBP4Q8N3X1 1017 aaPredicted RBP8.29□□□□□ -1.08
CASC4-206ENST00000558847 ZNF784Q8NCA9 323 aaPredicted RBP8.29□□□□□ -1.08
CASC4-206ENST00000558847 COL25A1Q9BXS0 654 aaPredicted RBP8.29□□□□□ -1.08
CASC4-206ENST00000558847 ESPNB1AK53 854 aa8.28□□□□□ -1.08
CASC4-206ENST00000558847 VWA5B2Q8N398 1253 aa8.28□□□□□ -1.08
CASC4-206ENST00000558847 PCDHB9Q9Y5E1 797 aa8.28□□□□□ -1.08
CASC4-206ENST00000558847 SLC35F4A4IF30 521 aa8.27□□□□□ -1.09
CASC4-206ENST00000558847 ERVH48-1M5A8F1 160 aa8.27□□□□□ -1.09
CASC4-206ENST00000558847 ITGA6P23229 1130 aa8.27□□□□□ -1.09
CASC4-206ENST00000558847 WASHC4Q2M389 1173 aa8.27□□□□□ -1.09
CASC4-206ENST00000558847 ADH1AP07327 375 aa8.26□□□□□ -1.09
CASC4-206ENST00000558847 KRT76Q01546 638 aa8.26□□□□□ -1.09
CASC4-206ENST00000558847 SV2AQ7L0J3 742 aa8.26□□□□□ -1.09
CASC4-206ENST00000558847 ARID3CA6NKF2 412 aa8.25□□□□□ -1.09
CASC4-206ENST00000558847 POM121CA8CG34 1229 aa8.25□□□□□ -1.09
CASC4-206ENST00000558847 RNF217Q8TC41 542 aa8.25□□□□□ -1.09
CASC4-206ENST00000558847 NANOS1Q8WY41 292 aaKnown RBP8.25□□□□□ -1.09
CASC4-206ENST00000558847 TRIM52Q96A61 297 aa8.25□□□□□ -1.09
CASC4-206ENST00000558847 SERPINA10Q9UK55 444 aa8.25□□□□□ -1.09
CASC4-206ENST00000558847 ZNF330Q9Y3S2 320 aaPredicted RBP8.25□□□□□ -1.09
CASC4-206ENST00000558847 ADD1P35611 737 aaKnown RBP8.24□□□□□ -1.09
CASC4-206ENST00000558847 PTGIRP43119 386 aa8.24□□□□□ -1.09
CASC4-206ENST00000558847 MCCD1P59942 119 aaPredicted RBP8.24□□□□□ -1.09
CASC4-206ENST00000558847 EIF4G2P78344 907 aaKnown RBP eCLIP8.24□□□□□ -1.09
CASC4-206ENST00000558847 SVOPQ8N4V2 548 aa8.24□□□□□ -1.09
CASC4-206ENST00000558847 ADAMTS19Q8TE59 1207 aa8.24□□□□□ -1.09
CASC4-206ENST00000558847 ZNF592Q92610 1267 aa8.24□□□□□ -1.09
CASC4-206ENST00000558847 CCDC97Q96F63 343 aaPredicted RBP8.24□□□□□ -1.09
CASC4-206ENST00000558847 ARID3AQ99856 593 aa8.24□□□□□ -1.09
CASC4-206ENST00000558847 C1orf115Q9H7X2 142 aa8.24□□□□□ -1.09
CASC4-206ENST00000558847 CYLDQ9NQC7 956 aa8.24□□□□□ -1.09
CASC4-206ENST00000558847 GIGYF1O75420 1035 aaPredicted RBP8.23□□□□□ -1.09
CASC4-206ENST00000558847 RNFT1Q5M7Z0 435 aa8.23□□□□□ -1.09
CASC4-206ENST00000558847 LILRA1O75019 489 aa8.22□□□□□ -1.09
CASC4-206ENST00000558847 SOX11P35716 441 aa8.22□□□□□ -1.09
CASC4-206ENST00000558847 LYSMD3Q7Z3D4 306 aa8.22□□□□□ -1.09
CASC4-206ENST00000558847 SEPT12Q8IYM1 358 aa8.22□□□□□ -1.09
CASC4-206ENST00000558847 ADAMTS8Q9UP79 889 aa8.22□□□□□ -1.09
CASC4-206ENST00000558847 RNF225M0QZC1 329 aaPredicted RBP8.21□□□□□ -1.1
CASC4-206ENST00000558847 KCNMA1Q12791 1236 aa8.21□□□□□ -1.1
CASC4-206ENST00000558847 FOXD4L5Q5VV16 416 aaPredicted RBP8.21□□□□□ -1.1
CASC4-206ENST00000558847 PRICKLE2Q7Z3G6 844 aa8.21□□□□□ -1.1
CASC4-206ENST00000558847 CCDC82Q8N4S0 544 aa8.21□□□□□ -1.1
CASC4-206ENST00000558847 ALG2Q9H553 416 aa8.21□□□□□ -1.1
CASC4-206ENST00000558847 CEP126Q9P2H0 1117 aa8.21□□□□□ -1.1
CASC4-206ENST00000558847 ZNF777Q9ULD5 760 aaPredicted RBP8.2□□□□□ -1.1
CASC4-206ENST00000558847 ATP5J2-PTCD1G3V325 749 aa8.19□□□□□ -1.1
CASC4-206ENST00000558847 MEN1O00255 615 aa8.19□□□□□ -1.1
CASC4-206ENST00000558847 RHOQP17081 205 aa8.19□□□□□ -1.1
CASC4-206ENST00000558847 ZNF385CQ66K41 422 aaPredicted RBP8.19□□□□□ -1.1
CASC4-206ENST00000558847 PHTF2Q8N3S3 785 aa8.19□□□□□ -1.1
CASC4-206ENST00000558847 TMEM151AQ8N4L1 468 aa8.19□□□□□ -1.1
CASC4-206ENST00000558847 KCTD17Q8N5Z5 321 aa8.19□□□□□ -1.1
CASC4-206ENST00000558847 SENP3-EIF4A1A0A087X0R7 540 aa8.18□□□□□ -1.1
CASC4-206ENST00000558847 CCDC85AQ96PX6 553 aaPredicted RBP8.18□□□□□ -1.1
CASC4-206ENST00000558847 CHIC2Q9UKJ5 165 aa8.18□□□□□ -1.1
CASC4-206ENST00000558847 GDF11O95390 407 aa8.17□□□□□ -1.1
CASC4-206ENST00000558847 MARSP56192 900 aaKnown RBP8.17□□□□□ -1.1
CASC4-206ENST00000558847 RASSF7Q02833 373 aa8.17□□□□□ -1.1
CASC4-206ENST00000558847 SEMA3FQ13275 785 aa8.17□□□□□ -1.1
CASC4-206ENST00000558847 KDF1Q8NAX2 398 aaPredicted RBP8.17□□□□□ -1.1
CASC4-206ENST00000558847 WHAMMQ8TF30 809 aa8.17□□□□□ -1.1
CASC4-206ENST00000558847 ESF1Q9H501 851 aaKnown RBP8.17□□□□□ -1.1
CASC4-206ENST00000558847 PIK3CDO00329 1044 aa8.16□□□□□ -1.1
CASC4-206ENST00000558847 RNF20Q5VTR2 975 aa8.16□□□□□ -1.1
CASC4-206ENST00000558847 RIPOR1Q6ZS17 1223 aa8.16□□□□□ -1.1
CASC4-206ENST00000558847 CCDC125Q86Z20 511 aa8.16□□□□□ -1.1
CASC4-206ENST00000558847 GLMNQ92990 594 aa8.16□□□□□ -1.1
CASC4-206ENST00000558847 UCN2Q96RP3 112 aa8.16□□□□□ -1.1
CASC4-206ENST00000558847 ADAMTS2O95450 1211 aa8.15□□□□□ -1.1
CASC4-206ENST00000558847 SLURP2P0DP57 97 aa8.15□□□□□ -1.1
CASC4-206ENST00000558847 RNF144AP50876 292 aaPredicted RBP8.15□□□□□ -1.1
CASC4-206ENST00000558847 MAP3K10Q02779 954 aa8.15□□□□□ -1.1
CASC4-206ENST00000558847 SLC27A3Q5K4L6 730 aa8.15□□□□□ -1.1
CASC4-206ENST00000558847 NLRP3Q96P20 1036 aa8.15□□□□□ -1.1
CASC4-206ENST00000558847 PCDHB11Q9Y5F2 797 aa8.15□□□□□ -1.1
CASC4-206ENST00000558847 SCTRP47872 440 aa8.14□□□□□ -1.11
CASC4-206ENST00000558847 ERVK-9P63128 1117 aa8.14□□□□□ -1.11
CASC4-206ENST00000558847 SLFNL1Q499Z3 407 aa8.14□□□□□ -1.11
CASC4-206ENST00000558847 CC2D2BQ6DHV5 1058 aa8.14□□□□□ -1.11
CASC4-206ENST00000558847 FOXR1Q6PIV2 292 aa8.14□□□□□ -1.11
CASC4-206ENST00000558847 RNF135Q8IUD6 432 aa8.14□□□□□ -1.11
CASC4-206ENST00000558847 CUEDC1Q9NWM3 386 aaPredicted RBP8.14□□□□□ -1.11
CASC4-206ENST00000558847 A0A1W2PRU2 124 aa8.13□□□□□ -1.11
CASC4-206ENST00000558847 IRS1P35568 1242 aa8.13□□□□□ -1.11
CASC4-206ENST00000558847 TSGA10IPQ3SY00 556 aa8.13□□□□□ -1.11
CASC4-206ENST00000558847 HDGFL1Q5TGJ6 251 aa8.13□□□□□ -1.11
CASC4-206ENST00000558847 CALR3Q96L12 384 aaKnown RBP8.13□□□□□ -1.11
CASC4-206ENST00000558847 GAS2L1Q99501 681 aaPredicted RBP8.13□□□□□ -1.11
CASC4-206ENST00000558847 CDCA7Q9BWT1 371 aaPredicted RBP8.13□□□□□ -1.11
CASC4-206ENST00000558847 GSK3AP49840 483 aa8.12□□□□□ -1.11
CASC4-206ENST00000558847 SRSF11Q05519 484 aaKnown RBP8.12□□□□□ -1.11
CASC4-206ENST00000558847 NFATC2IPQ8NCF5 419 aa8.12□□□□□ -1.11
CASC4-206ENST00000558847 DOLKQ9UPQ8 538 aa8.12□□□□□ -1.11
CASC4-206ENST00000558847 GPR25O00155 361 aa8.11□□□□□ -1.11
CASC4-206ENST00000558847 GPC1P35052 558 aa8.11□□□□□ -1.11
CASC4-206ENST00000558847 POU4F2Q12837 409 aa8.11□□□□□ -1.11
CASC4-206ENST00000558847 LYPD4Q6UWN0 246 aa8.11□□□□□ -1.11
CASC4-206ENST00000558847 CYP2U1Q7Z449 544 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms