RNA–Protein interactions for RNA: ENST00000558768.5

TRPM1-208, Transcript of transient receptor potential cation channel subfamily M member 1, human

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,581 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRPM1-208	ENST00000558768	FAM184B	Q9ULE4	1060 aa		11.36	□□□□□ -0.59
TRPM1-208	ENST00000558768	EPRS	P07814	1512 aa	Known RBP	11.35	□□□□□ -0.59
TRPM1-208	ENST00000558768	SAFB	Q15424	915 aa	Known RBP eCLIP	11.35	□□□□□ -0.59
TRPM1-208	ENST00000558768	ZSCAN23	Q3MJ62	389 aa		11.35	□□□□□ -0.59
TRPM1-208	ENST00000558768	SECISBP2L	Q93073	1101 aa	Known RBP	11.35	□□□□□ -0.59
TRPM1-208	ENST00000558768	ANKRD62	A6NC57	917 aa		11.35	□□□□□ -0.59
TRPM1-208	ENST00000558768	KIF3B	O15066	747 aa		11.35	□□□□□ -0.59
TRPM1-208	ENST00000558768	SLC4A10	Q6U841	1118 aa		11.35	□□□□□ -0.59
TRPM1-208	ENST00000558768	RSPH14	Q9UHP6	348 aa		11.35	□□□□□ -0.59
TRPM1-208	ENST00000558768	HMGXB3	Q12766	1538 aa		11.35	□□□□□ -0.59
TRPM1-208	ENST00000558768	USP19	O94966	1318 aa		11.35	□□□□□ -0.59
TRPM1-208	ENST00000558768	SFPQ	P23246	707 aa	Known RBP eCLIP	11.35	□□□□□ -0.59
TRPM1-208	ENST00000558768	ARHGAP29	Q52LW3	1261 aa		11.35	□□□□□ -0.59
TRPM1-208	ENST00000558768	NUP133	Q8WUM0	1156 aa		11.35	□□□□□ -0.59
TRPM1-208	ENST00000558768	TMX4	Q9H1E5	349 aa	Predicted RBP	11.35	□□□□□ -0.59
TRPM1-208	ENST00000558768	UHRF1BP1	Q6BDS2	1440 aa		11.35	□□□□□ -0.59
TRPM1-208	ENST00000558768	SYCE3	A1L190	88 aa		11.35	□□□□□ -0.59
TRPM1-208	ENST00000558768	UTP14C	Q5TAP6	766 aa	Known RBP	11.35	□□□□□ -0.59
TRPM1-208	ENST00000558768	FMNL3	Q8IVF7	1028 aa		11.35	□□□□□ -0.59
TRPM1-208	ENST00000558768	CEP57L1	Q8IYX8	460 aa		11.35	□□□□□ -0.59
TRPM1-208	ENST00000558768	CCDC148	Q8NFR7	591 aa		11.35	□□□□□ -0.59
TRPM1-208	ENST00000558768	CHMP7	Q8WUX9	453 aa	Predicted RBP	11.35	□□□□□ -0.59
TRPM1-208	ENST00000558768	KDM5B	Q9UGL1	1544 aa		11.34	□□□□□ -0.59
TRPM1-208	ENST00000558768	GRIN2B	Q13224	1484 aa		11.34	□□□□□ -0.59
TRPM1-208	ENST00000558768	SCAPER	Q9BY12	1400 aa		11.34	□□□□□ -0.59
TRPM1-208	ENST00000558768	ATF7IP	Q6VMQ6	1270 aa		11.34	□□□□□ -0.59
TRPM1-208	ENST00000558768	GIGYF2	Q6Y7W6	1299 aa	Known RBP	11.34	□□□□□ -0.59
TRPM1-208	ENST00000558768	CEP57	Q86XR8	500 aa		11.34	□□□□□ -0.59
TRPM1-208	ENST00000558768	CCAR1	Q8IX12	1150 aa	Known RBP	11.34	□□□□□ -0.59
TRPM1-208	ENST00000558768	GAPVD1	Q14C86	1478 aa		11.33	□□□□□ -0.59
TRPM1-208	ENST00000558768	GPRASP1	Q5JY77	1395 aa		11.33	□□□□□ -0.6
TRPM1-208	ENST00000558768	EBAG9	O00559	213 aa		11.33	□□□□□ -0.6
TRPM1-208	ENST00000558768	ZNF445	P59923	1031 aa		11.33	□□□□□ -0.6
TRPM1-208	ENST00000558768	GAS2L3	Q86XJ1	694 aa		11.33	□□□□□ -0.6
TRPM1-208	ENST00000558768	CEP63	Q96MT8	703 aa		11.33	□□□□□ -0.6
TRPM1-208	ENST00000558768	OGFR	Q9NZT2	677 aa		11.33	□□□□□ -0.6
TRPM1-208	ENST00000558768	SNAPC4	Q5SXM2	1469 aa		11.33	□□□□□ -0.6
TRPM1-208	ENST00000558768	NAA25	Q14CX7	972 aa		11.33	□□□□□ -0.6
TRPM1-208	ENST00000558768	LRSAM1	Q6UWE0	723 aa		11.33	□□□□□ -0.6
TRPM1-208	ENST00000558768	CFAP57	Q96MR6	1250 aa		11.33	□□□□□ -0.6
TRPM1-208	ENST00000558768	SPAG9	O60271	1321 aa	Known RBP	11.33	□□□□□ -0.6
TRPM1-208	ENST00000558768	ERBB4	Q15303	1308 aa		11.33	□□□□□ -0.6
TRPM1-208	ENST00000558768	KIF5B	P33176	963 aa		11.33	□□□□□ -0.6
TRPM1-208	ENST00000558768	KRT85	P78386	507 aa		11.33	□□□□□ -0.6
TRPM1-208	ENST00000558768	GABPB1	Q06547	395 aa	Predicted RBP	11.33	□□□□□ -0.6
TRPM1-208	ENST00000558768	HDAC1	Q13547	482 aa	Predicted RBP	11.33	□□□□□ -0.6
TRPM1-208	ENST00000558768	AP1AR	Q63HQ0	302 aa		11.33	□□□□□ -0.6
TRPM1-208	ENST00000558768	NEK4	P51957	841 aa		11.32	□□□□□ -0.6
TRPM1-208	ENST00000558768	LRCH2	Q5VUJ6	765 aa		11.32	□□□□□ -0.6
TRPM1-208	ENST00000558768	KIF3C	O14782	793 aa		11.32	□□□□□ -0.6
TRPM1-208	ENST00000558768	BMP2KL	Q5H9B9	411 aa		11.32	□□□□□ -0.6
TRPM1-208	ENST00000558768	TEX2	Q8IWB9	1127 aa		11.32	□□□□□ -0.6
TRPM1-208	ENST00000558768	PSMD1	Q99460	953 aa		11.32	□□□□□ -0.6
TRPM1-208	ENST00000558768	DACH1	Q9UI36	760 aa		11.32	□□□□□ -0.6
TRPM1-208	ENST00000558768		V9GYY5	206 aa	Predicted RBP	11.32	□□□□□ -0.6
TRPM1-208	ENST00000558768	ARID4A	P29374	1257 aa	Predicted RBP	11.32	□□□□□ -0.6
TRPM1-208	ENST00000558768	MAP2K2	P36507	400 aa		11.32	□□□□□ -0.6
TRPM1-208	ENST00000558768	ARFGAP3	Q9NP61	516 aa		11.32	□□□□□ -0.6
TRPM1-208	ENST00000558768	ATP6V1A	P38606	617 aa		11.31	□□□□□ -0.6
TRPM1-208	ENST00000558768	C16orf45	Q96MC5	204 aa	Predicted RBP	11.31	□□□□□ -0.6
TRPM1-208	ENST00000558768	CAPN2	P17655	700 aa		11.31	□□□□□ -0.6
TRPM1-208	ENST00000558768	PPM1E	Q8WY54	764 aa		11.31	□□□□□ -0.6
TRPM1-208	ENST00000558768	GCC2	Q8IWJ2	1684 aa		11.31	□□□□□ -0.6
TRPM1-208	ENST00000558768	KIF14	Q15058	1648 aa		11.31	□□□□□ -0.6
TRPM1-208	ENST00000558768	EXOSC9	Q06265	439 aa	Known RBP	11.31	□□□□□ -0.6
TRPM1-208	ENST00000558768	ZNF396	Q96N95	335 aa	Predicted RBP	11.31	□□□□□ -0.6
TRPM1-208	ENST00000558768	NUP62CL	Q9H1M0	184 aa		11.31	□□□□□ -0.6
TRPM1-208	ENST00000558768	ABCA10	Q8WWZ4	1543 aa		11.31	□□□□□ -0.6
TRPM1-208	ENST00000558768	ARHGEF12	Q9NZN5	1544 aa		11.31	□□□□□ -0.6
TRPM1-208	ENST00000558768	CUL7	Q14999	1698 aa		11.3	□□□□□ -0.6
TRPM1-208	ENST00000558768	EPB41L2	O43491	1005 aa	Known RBP	11.3	□□□□□ -0.6
TRPM1-208	ENST00000558768	DMTN	Q08495	405 aa		11.3	□□□□□ -0.6
TRPM1-208	ENST00000558768	UVSSA	Q2YD98	709 aa		11.3	□□□□□ -0.6
TRPM1-208	ENST00000558768	MYRIP	Q8NFW9	859 aa		11.3	□□□□□ -0.6
TRPM1-208	ENST00000558768	TCHP	Q9BT92	498 aa		11.3	□□□□□ -0.6
TRPM1-208	ENST00000558768	PRIM1	P49642	420 aa	Known RBP	11.3	□□□□□ -0.6
TRPM1-208	ENST00000558768	KIF4B	Q2VIQ3	1234 aa		11.3	□□□□□ -0.6
TRPM1-208	ENST00000558768	OTUD6B	Q8N6M0	293 aa		11.3	□□□□□ -0.6
TRPM1-208	ENST00000558768	JMY	Q8N9B5	988 aa		11.3	□□□□□ -0.6
TRPM1-208	ENST00000558768	FBF1	Q8TES7	1133 aa		11.3	□□□□□ -0.6
TRPM1-208	ENST00000558768	MAGEC2	Q9UBF1	373 aa	Predicted RBP	11.3	□□□□□ -0.6
TRPM1-208	ENST00000558768	DISP3	Q9P2K9	1392 aa		11.3	□□□□□ -0.6
TRPM1-208	ENST00000558768	ZFY	P08048	801 aa	Predicted RBP	11.3	□□□□□ -0.6
TRPM1-208	ENST00000558768	EPS15	P42566	896 aa		11.3	□□□□□ -0.6
TRPM1-208	ENST00000558768	CCDC27	Q2M243	656 aa		11.3	□□□□□ -0.6
TRPM1-208	ENST00000558768	C6orf163	Q5TEZ5	329 aa		11.3	□□□□□ -0.6
TRPM1-208	ENST00000558768	NOLC1	Q14978	699 aa	Known RBP eCLIP	11.3	□□□□□ -0.6
TRPM1-208	ENST00000558768	IMMT	Q16891	758 aa	Known RBP	11.3	□□□□□ -0.6
TRPM1-208	ENST00000558768	ZFYVE27	Q5T4F4	411 aa		11.3	□□□□□ -0.6
TRPM1-208	ENST00000558768	SMTNL1	A8MU46	457 aa		11.29	□□□□□ -0.6
TRPM1-208	ENST00000558768	KIF5C	O60282	957 aa		11.29	□□□□□ -0.6
TRPM1-208	ENST00000558768	DZIP1	Q86YF9	867 aa	Known RBP	11.29	□□□□□ -0.6
TRPM1-208	ENST00000558768	PSMA5	P28066	241 aa		11.29	□□□□□ -0.6
TRPM1-208	ENST00000558768	BRPF1	P55201	1214 aa	Predicted RBP	11.29	□□□□□ -0.6
TRPM1-208	ENST00000558768	TRDN	Q13061	729 aa		11.29	□□□□□ -0.6
TRPM1-208	ENST00000558768	ERC1	Q8IUD2	1116 aa		11.29	□□□□□ -0.6
TRPM1-208	ENST00000558768	UPF3B	Q9BZI7	483 aa	Known RBP	11.29	□□□□□ -0.6
TRPM1-208	ENST00000558768	API5	Q9BZZ5	524 aa	Known RBP	11.29	□□□□□ -0.6
TRPM1-208	ENST00000558768	NOB1	Q9ULX3	412 aa	Known RBP	11.29	□□□□□ -0.6
TRPM1-208	ENST00000558768	GTF2E1	P29083	439 aa	Predicted RBP	11.29	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms