RNA–Protein interactions for RNA: ENST00000557641.5

GABRB3-212, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 828 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-212ENST00000557641 NBPF6Q5VWK0 638 aa13.4□□□□□ -0.26
GABRB3-212ENST00000557641 AEBP1Q8IUX7 1158 aa13.4□□□□□ -0.26
GABRB3-212ENST00000557641 GAS2L2Q8NHY3 880 aa13.4□□□□□ -0.26
GABRB3-212ENST00000557641 PHACTR3Q96KR7 559 aa13.4□□□□□ -0.26
GABRB3-212ENST00000557641 NBPF4Q96M43 638 aa13.4□□□□□ -0.26
GABRB3-212ENST00000557641 RRP7AQ9Y3A4 280 aaKnown RBP13.4□□□□□ -0.26
GABRB3-212ENST00000557641 COL22A1Q8NFW1 1626 aaPredicted RBP13.39□□□□□ -0.27
GABRB3-212ENST00000557641 SENP3-EIF4A1A0A087X0R7 540 aa13.39□□□□□ -0.27
GABRB3-212ENST00000557641 TRMT2AQ8IZ69 625 aaKnown RBP13.39□□□□□ -0.27
GABRB3-212ENST00000557641 COL16A1Q07092 1604 aaPredicted RBP13.39□□□□□ -0.27
GABRB3-212ENST00000557641 HTATSF1O43719 755 aaKnown RBP13.38□□□□□ -0.27
GABRB3-212ENST00000557641 MYH16Q9H6N6 1097 aa13.38□□□□□ -0.27
GABRB3-212ENST00000557641 TRIM35Q9UPQ4 493 aa13.38□□□□□ -0.27
GABRB3-212ENST00000557641 PHLPP1O60346 1717 aa13.38□□□□□ -0.27
GABRB3-212ENST00000557641 CSB-PGBD3P0DP91 1061 aa13.37□□□□□ -0.27
GABRB3-212ENST00000557641 CHRNA2Q15822 529 aa13.37□□□□□ -0.27
GABRB3-212ENST00000557641 AMOTQ4VCS5 1084 aa13.37□□□□□ -0.27
GABRB3-212ENST00000557641 CDCA7LQ96GN5 454 aa13.37□□□□□ -0.27
GABRB3-212ENST00000557641 COL18A1P39060 1754 aa13.37□□□□□ -0.27
GABRB3-212ENST00000557641 FXR2P51116 673 aaKnown RBP eCLIP13.36□□□□□ -0.27
GABRB3-212ENST00000557641 PLEKHO1Q53GL0 409 aaPredicted RBP13.36□□□□□ -0.27
GABRB3-212ENST00000557641 DUSP27Q5VZP5 1158 aa13.36□□□□□ -0.27
GABRB3-212ENST00000557641 NLRP2Q9NX02 1062 aa13.36□□□□□ -0.27
GABRB3-212ENST00000557641 WDR17Q8IZU2 1322 aa13.36□□□□□ -0.27
GABRB3-212ENST00000557641 JCADQ9P266 1359 aa13.35□□□□□ -0.27
GABRB3-212ENST00000557641 FAM83GA6ND36 823 aa13.35□□□□□ -0.27
GABRB3-212ENST00000557641 ABCA3Q99758 1704 aa13.35□□□□□ -0.27
GABRB3-212ENST00000557641 CAMTA1Q9Y6Y1 1673 aa13.34□□□□□ -0.27
GABRB3-212ENST00000557641 MTHFSDQ2M296 383 aaKnown RBP13.34□□□□□ -0.27
GABRB3-212ENST00000557641 PIP4P2Q8N4L2 257 aa13.34□□□□□ -0.27
GABRB3-212ENST00000557641 RAPGEF4Q8WZA2 1011 aa13.34□□□□□ -0.27
GABRB3-212ENST00000557641 RTF1Q92541 710 aaKnown RBP13.34□□□□□ -0.27
GABRB3-212ENST00000557641 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.34□□□□□ -0.27
GABRB3-212ENST00000557641 FAM208AQ9UK61 1670 aaKnown RBP13.34□□□□□ -0.27
GABRB3-212ENST00000557641 EVA1CP58658 441 aa13.33□□□□□ -0.28
GABRB3-212ENST00000557641 GNAI1P63096 354 aa13.33□□□□□ -0.28
GABRB3-212ENST00000557641 USHBP1Q8N6Y0 703 aa13.33□□□□□ -0.28
GABRB3-212ENST00000557641 LMO7Q8WWI1 1683 aa13.33□□□□□ -0.28
GABRB3-212ENST00000557641 COL5A2P05997 1499 aaPredicted RBP13.32□□□□□ -0.28
GABRB3-212ENST00000557641 GNAT3A8MTJ3 354 aa13.32□□□□□ -0.28
GABRB3-212ENST00000557641 CT47B1P0C2W7 299 aaPredicted RBP13.32□□□□□ -0.28
GABRB3-212ENST00000557641 TATP17735 454 aaPredicted RBP13.32□□□□□ -0.28
GABRB3-212ENST00000557641 CARD10Q9BWT7 1032 aa13.32□□□□□ -0.28
GABRB3-212ENST00000557641 IFT57Q9NWB7 429 aa13.32□□□□□ -0.28
GABRB3-212ENST00000557641 SPATA31A6Q5VVP1 1343 aa13.32□□□□□ -0.28
GABRB3-212ENST00000557641 COL14A1Q05707 1796 aaKnown RBP13.31□□□□□ -0.28
GABRB3-212ENST00000557641 TOM1L2Q6ZVM7 507 aa13.31□□□□□ -0.28
GABRB3-212ENST00000557641 RCAN3Q9UKA8 241 aa13.31□□□□□ -0.28
GABRB3-212ENST00000557641 SPG7Q9UQ90 795 aa13.31□□□□□ -0.28
GABRB3-212ENST00000557641 MAP3K5Q99683 1374 aa13.31□□□□□ -0.28
GABRB3-212ENST00000557641 NEFLP07196 543 aa13.3□□□□□ -0.28
GABRB3-212ENST00000557641 AKAP4Q5JQC9 854 aa13.3□□□□□ -0.28
GABRB3-212ENST00000557641 CFAP44Q96MT7 982 aa13.3□□□□□ -0.28
GABRB3-212ENST00000557641 BTG4Q9NY30 223 aa13.3□□□□□ -0.28
GABRB3-212ENST00000557641 ZNF853P0CG23 659 aa13.29□□□□□ -0.28
GABRB3-212ENST00000557641 C1orf141Q5JVX7 400 aa13.29□□□□□ -0.28
GABRB3-212ENST00000557641 BABAM1Q9NWV8 329 aa13.29□□□□□ -0.28
GABRB3-212ENST00000557641 SUPT16HQ9Y5B9 1047 aaKnown RBP13.29□□□□□ -0.28
GABRB3-212ENST00000557641 CRB1P82279 1406 aa13.29□□□□□ -0.28
GABRB3-212ENST00000557641 PRKAR2AP13861 404 aaKnown RBP13.28□□□□□ -0.28
GABRB3-212ENST00000557641 ZNF530Q6P9A1 599 aaPredicted RBP13.28□□□□□ -0.28
GABRB3-212ENST00000557641 STRN4Q9NRL3 753 aa13.28□□□□□ -0.28
GABRB3-212ENST00000557641 RNF123Q5XPI4 1314 aa13.28□□□□□ -0.28
GABRB3-212ENST00000557641 PLCD3Q8N3E9 789 aa13.27□□□□□ -0.29
GABRB3-212ENST00000557641 ZNF428Q96B54 188 aa13.27□□□□□ -0.29
GABRB3-212ENST00000557641 FANCIQ9NVI1 1328 aa13.27□□□□□ -0.29
GABRB3-212ENST00000557641 OVOS2A0A0G2JMS6 1433 aa13.26□□□□□ -0.29
GABRB3-212ENST00000557641 NUTM2BA6NNL0 878 aaPredicted RBP13.26□□□□□ -0.29
GABRB3-212ENST00000557641 NUTM2EB1AL46 878 aaPredicted RBP13.26□□□□□ -0.29
GABRB3-212ENST00000557641 CHL1O00533 1208 aa13.26□□□□□ -0.29
GABRB3-212ENST00000557641 ADAMTS2O95450 1211 aa13.26□□□□□ -0.29
GABRB3-212ENST00000557641 HSP90AB1P08238 724 aaKnown RBP13.26□□□□□ -0.29
GABRB3-212ENST00000557641 IL2RBP14784 551 aa13.26□□□□□ -0.29
GABRB3-212ENST00000557641 LARP1Q6PKG0 1096 aaKnown RBP13.26□□□□□ -0.29
GABRB3-212ENST00000557641 MCM10Q7L590 875 aa13.26□□□□□ -0.29
GABRB3-212ENST00000557641 NUTM2AQ8IVF1 878 aaPredicted RBP13.26□□□□□ -0.29
GABRB3-212ENST00000557641 RGPD5Q99666 1765 aa13.26□□□□□ -0.29
GABRB3-212ENST00000557641 CEMIPQ8WUJ3 1361 aa13.25□□□□□ -0.29
GABRB3-212ENST00000557641 HSPA1LP34931 641 aa13.25□□□□□ -0.29
GABRB3-212ENST00000557641 VASPP50552 380 aaPredicted RBP13.25□□□□□ -0.29
GABRB3-212ENST00000557641 DCTN1Q14203 1278 aa13.25□□□□□ -0.29
GABRB3-212ENST00000557641 ERICH6BQ5W0A0 696 aa13.25□□□□□ -0.29
GABRB3-212ENST00000557641 CHADLQ6NUI6 762 aa13.25□□□□□ -0.29
GABRB3-212ENST00000557641 IFNL2Q8IZJ0 200 aa13.25□□□□□ -0.29
GABRB3-212ENST00000557641 THUMPD2Q9BTF0 503 aaKnown RBP13.25□□□□□ -0.29
GABRB3-212ENST00000557641 CDCA7Q9BWT1 371 aaPredicted RBP13.25□□□□□ -0.29
GABRB3-212ENST00000557641 CREBZFQ9NS37 354 aa13.25□□□□□ -0.29
GABRB3-212ENST00000557641 THRAP3Q9Y2W1 955 aaKnown RBP13.25□□□□□ -0.29
GABRB3-212ENST00000557641 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.24□□□□□ -0.29
GABRB3-212ENST00000557641 IL17REQ8NFR9 667 aa13.24□□□□□ -0.29
GABRB3-212ENST00000557641 LAS1LQ9Y4W2 734 aaKnown RBP13.24□□□□□ -0.29
GABRB3-212ENST00000557641 GTF3C3Q9Y5Q9 886 aa13.24□□□□□ -0.29
GABRB3-212ENST00000557641 MEGF6O75095 1541 aa13.23□□□□□ -0.29
GABRB3-212ENST00000557641 SLIT2O94813 1529 aa13.23□□□□□ -0.29
GABRB3-212ENST00000557641 RGPD2P0DJD1 1756 aa13.23□□□□□ -0.29
GABRB3-212ENST00000557641 EXOSC9Q06265 439 aaKnown RBP13.23□□□□□ -0.29
GABRB3-212ENST00000557641 TAF7Q15545 349 aaPredicted RBP13.23□□□□□ -0.29
GABRB3-212ENST00000557641 ZCRB1Q8TBF4 217 aaKnown RBP13.23□□□□□ -0.29
GABRB3-212ENST00000557641 TSR2Q969E8 191 aaKnown RBP13.23□□□□□ -0.29
GABRB3-212ENST00000557641 MBIPQ9NS73 344 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms