RNA–Protein interactions for RNA: ENST00000557599.5

PRKCH-227, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-227ENST00000557599 RTL1A6NKG5 1358 aa14.15□□□□□ -0.14
PRKCH-227ENST00000557599 EXOC5O00471 708 aa14.15□□□□□ -0.14
PRKCH-227ENST00000557599 KCNQ2O43526 872 aa14.15□□□□□ -0.14
PRKCH-227ENST00000557599 COG3Q96JB2 828 aa14.15□□□□□ -0.14
PRKCH-227ENST00000557599 CSB-PGBD3P0DP91 1061 aa14.14□□□□□ -0.15
PRKCH-227ENST00000557599 ANKRD24Q8TF21 1146 aa14.14□□□□□ -0.15
PRKCH-227ENST00000557599 IP6K1Q92551 441 aa14.14□□□□□ -0.15
PRKCH-227ENST00000557599 FYB1O15117 783 aa14.13□□□□□ -0.15
PRKCH-227ENST00000557599 IL2RBP14784 551 aa14.13□□□□□ -0.15
PRKCH-227ENST00000557599 TXNRD1Q16881 649 aa14.13□□□□□ -0.15
PRKCH-227ENST00000557599 CFAP53Q96M91 514 aa14.13□□□□□ -0.15
PRKCH-227ENST00000557599 PDGFDQ9GZP0 370 aaPredicted RBP14.13□□□□□ -0.15
PRKCH-227ENST00000557599 GGNBP2Q9H3C7 697 aa14.13□□□□□ -0.15
PRKCH-227ENST00000557599 SPON1Q9HCB6 807 aa14.13□□□□□ -0.15
PRKCH-227ENST00000557599 GOLGB1Q14789 3259 aaKnown RBP14.12□□□□□ -0.15
PRKCH-227ENST00000557599 MEGF6O75095 1541 aa14.12□□□□□ -0.15
PRKCH-227ENST00000557599 PTGER2P43116 358 aa14.12□□□□□ -0.15
PRKCH-227ENST00000557599 SGIP1Q9BQI5 828 aa14.12□□□□□ -0.15
PRKCH-227ENST00000557599 NCAPD2Q15021 1401 aa14.12□□□□□ -0.15
PRKCH-227ENST00000557599 MAP3K19Q56UN5 1328 aa14.12□□□□□ -0.15
PRKCH-227ENST00000557599 PPP2R1AP30153 589 aa14.11□□□□□ -0.15
PRKCH-227ENST00000557599 PKD1L3Q7Z443 1732 aa14.11□□□□□ -0.15
PRKCH-227ENST00000557599 TNNT2P45379 298 aaPredicted RBP14.1□□□□□ -0.15
PRKCH-227ENST00000557599 SLC15A2Q16348 729 aa14.1□□□□□ -0.15
PRKCH-227ENST00000557599 NLRP2Q9NX02 1062 aa14.1□□□□□ -0.15
PRKCH-227ENST00000557599 TOGARAM1Q9Y4F4 1720 aa14.1□□□□□ -0.15
PRKCH-227ENST00000557599 KIF24Q5T7B8 1368 aa14.09□□□□□ -0.15
PRKCH-227ENST00000557599 HOXC9P31274 260 aa14.09□□□□□ -0.15
PRKCH-227ENST00000557599 WDR43Q15061 677 aaKnown RBP eCLIP14.08□□□□□ -0.16
PRKCH-227ENST00000557599 MAP3K5Q99683 1374 aa14.08□□□□□ -0.16
PRKCH-227ENST00000557599 LRRC4BQ9NT99 713 aa14.07□□□□□ -0.16
PRKCH-227ENST00000557599 FAM9BQ8IZU0 186 aa14.06□□□□□ -0.16
PRKCH-227ENST00000557599 C5P01031 1676 aa14.05□□□□□ -0.16
PRKCH-227ENST00000557599 FBLN1P23142 703 aa14.05□□□□□ -0.16
PRKCH-227ENST00000557599 ACSBG1Q96GR2 724 aa14.05□□□□□ -0.16
PRKCH-227ENST00000557599 NUDCQ9Y266 331 aa14.05□□□□□ -0.16
PRKCH-227ENST00000557599 TAF1LQ8IZX4 1826 aa14.05□□□□□ -0.16
PRKCH-227ENST00000557599 INSRP06213 1382 aa14.05□□□□□ -0.16
PRKCH-227ENST00000557599 MTHFSP49914 203 aa14.04□□□□□ -0.16
PRKCH-227ENST00000557599 ZNF827Q17R98 1081 aa14.04□□□□□ -0.16
PRKCH-227ENST00000557599 AKT1S1Q96B36 256 aa14.04□□□□□ -0.16
PRKCH-227ENST00000557599 YTHDC1Q96MU7 727 aaKnown RBP14.04□□□□□ -0.16
PRKCH-227ENST00000557599 MTFR1LQ9H019 292 aa14.04□□□□□ -0.16
PRKCH-227ENST00000557599 STK32BQ9NY57 414 aa14.04□□□□□ -0.16
PRKCH-227ENST00000557599 ZBTB7AO95365 584 aa14.03□□□□□ -0.16
PRKCH-227ENST00000557599 FLT4P35916 1363 aa14.03□□□□□ -0.16
PRKCH-227ENST00000557599 ITGB4P16144 1822 aa14.03□□□□□ -0.16
PRKCH-227ENST00000557599 PPM1GO15355 546 aaPredicted RBP14.02□□□□□ -0.17
PRKCH-227ENST00000557599 SLC27A3Q5K4L6 730 aa14.02□□□□□ -0.17
PRKCH-227ENST00000557599 NBPF6Q5VWK0 638 aa14.02□□□□□ -0.17
PRKCH-227ENST00000557599 NBPF4Q96M43 638 aa14.02□□□□□ -0.17
PRKCH-227ENST00000557599 MAP2P11137 1827 aaKnown RBP14.01□□□□□ -0.17
PRKCH-227ENST00000557599 CCDC184Q52MB2 194 aa14.01□□□□□ -0.17
PRKCH-227ENST00000557599 SMG6Q86US8 1419 aaKnown RBP14□□□□□ -0.17
PRKCH-227ENST00000557599 CENPBP07199 599 aaPredicted RBP14□□□□□ -0.17
PRKCH-227ENST00000557599 RRS1Q15050 365 aaKnown RBP14□□□□□ -0.17
PRKCH-227ENST00000557599 PNISRQ8TF01 805 aaKnown RBP14□□□□□ -0.17
PRKCH-227ENST00000557599 PPP1R1BQ9UD71 204 aaPredicted RBP14□□□□□ -0.17
PRKCH-227ENST00000557599 PLEKHG2Q9H7P9 1386 aa13.99□□□□□ -0.17
PRKCH-227ENST00000557599 PNPLA7Q6ZV29 1317 aa13.99□□□□□ -0.17
PRKCH-227ENST00000557599 AMPHP49418 695 aa13.99□□□□□ -0.17
PRKCH-227ENST00000557599 ZCRB1Q8TBF4 217 aaKnown RBP13.99□□□□□ -0.17
PRKCH-227ENST00000557599 CHD4Q14839 1912 aa13.98□□□□□ -0.17
PRKCH-227ENST00000557599 DIAPH1O60610 1272 aaKnown RBP13.98□□□□□ -0.17
PRKCH-227ENST00000557599 LTV1Q96GA3 475 aaPredicted RBP13.98□□□□□ -0.17
PRKCH-227ENST00000557599 SYT17Q9BSW7 474 aa13.98□□□□□ -0.17
PRKCH-227ENST00000557599 PNNQ9H307 717 aaKnown RBP13.98□□□□□ -0.17
PRKCH-227ENST00000557599 POLKQ9UBT6 870 aa13.98□□□□□ -0.17
PRKCH-227ENST00000557599 NEFMP07197 916 aa13.97□□□□□ -0.17
PRKCH-227ENST00000557599 PRIM1P49642 420 aaKnown RBP13.97□□□□□ -0.17
PRKCH-227ENST00000557599 HSP90AB2PQ58FF8 381 aa13.97□□□□□ -0.17
PRKCH-227ENST00000557599 DDX54Q8TDD1 881 aaKnown RBP13.97□□□□□ -0.17
PRKCH-227ENST00000557599 SLC16A10Q8TF71 515 aa13.97□□□□□ -0.17
PRKCH-227ENST00000557599 FHDC1Q9C0D6 1143 aaPredicted RBP13.97□□□□□ -0.17
PRKCH-227ENST00000557599 ATF5Q9Y2D1 282 aaPredicted RBP13.97□□□□□ -0.17
PRKCH-227ENST00000557599 ZNF831Q5JPB2 1677 aa13.97□□□□□ -0.17
PRKCH-227ENST00000557599 C4BP0C0L5 1744 aa13.96□□□□□ -0.17
PRKCH-227ENST00000557599 UBR3Q6ZT12 1888 aa13.96□□□□□ -0.17
PRKCH-227ENST00000557599 HNRNPUQ00839 825 aaKnown RBP eCLIP13.96□□□□□ -0.17
PRKCH-227ENST00000557599 EMILIN1Q9Y6C2 1016 aa13.96□□□□□ -0.17
PRKCH-227ENST00000557599 U2SURPO15042 1029 aaKnown RBP13.95□□□□□ -0.18
PRKCH-227ENST00000557599 YY1P25490 414 aa13.95□□□□□ -0.18
PRKCH-227ENST00000557599 PCDH11XQ9BZA7 1347 aa13.94□□□□□ -0.18
PRKCH-227ENST00000557599 PCDH11YQ9BZA8 1340 aa13.94□□□□□ -0.18
PRKCH-227ENST00000557599 U2AF1L5P0DN76 240 aaPredicted RBP13.94□□□□□ -0.18
PRKCH-227ENST00000557599 U2AF1Q01081 240 aaKnown RBP eCLIP13.94□□□□□ -0.18
PRKCH-227ENST00000557599 USHBP1Q8N6Y0 703 aa13.94□□□□□ -0.18
PRKCH-227ENST00000557599 ARXQ96QS3 562 aa13.94□□□□□ -0.18
PRKCH-227ENST00000557599 CYP27B1O15528 508 aa13.93□□□□□ -0.18
PRKCH-227ENST00000557599 CICQ96RK0 1608 aaPredicted RBP13.93□□□□□ -0.18
PRKCH-227ENST00000557599 KAT6BQ8WYB5 2073 aa13.92□□□□□ -0.18
PRKCH-227ENST00000557599 NKX1-1Q15270 411 aaPredicted RBP13.92□□□□□ -0.18
PRKCH-227ENST00000557599 COL5A3P25940 1745 aaPredicted RBP13.91□□□□□ -0.18
PRKCH-227ENST00000557599 KCNQ4P56696 695 aa13.91□□□□□ -0.18
PRKCH-227ENST00000557599 RAPGEF4Q8WZA2 1011 aa13.91□□□□□ -0.18
PRKCH-227ENST00000557599 ADAMTS8Q9UP79 889 aa13.91□□□□□ -0.18
PRKCH-227ENST00000557599 MAPK8IP3Q9UPT6 1336 aa13.9□□□□□ -0.18
PRKCH-227ENST00000557599 TATP17735 454 aaPredicted RBP13.9□□□□□ -0.18
PRKCH-227ENST00000557599 NGEFQ8N5V2 710 aa13.9□□□□□ -0.18
PRKCH-227ENST00000557599 PALLDQ8WX93 1383 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms