RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 NFAT5O94916 1531 aa11.37□□□□□ -0.59
PSEN1-223ENST00000557511 CHRM1P11229 460 aaPredicted RBP11.37□□□□□ -0.59
PSEN1-223ENST00000557511 BARGINQ6ZT62 677 aa11.37□□□□□ -0.59
PSEN1-223ENST00000557511 IP6K1Q92551 441 aa11.37□□□□□ -0.59
PSEN1-223ENST00000557511 CDCA7Q9BWT1 371 aaPredicted RBP11.37□□□□□ -0.59
PSEN1-223ENST00000557511 AXIN2Q9Y2T1 843 aa11.37□□□□□ -0.59
PSEN1-223ENST00000557511 NRAPQ86VF7 1730 aa11.37□□□□□ -0.59
PSEN1-223ENST00000557511 GLI3P10071 1580 aa11.37□□□□□ -0.59
PSEN1-223ENST00000557511 BLMP54132 1417 aaPredicted RBP11.36□□□□□ -0.59
PSEN1-223ENST00000557511 SMG6Q86US8 1419 aaKnown RBP11.36□□□□□ -0.59
PSEN1-223ENST00000557511 ABCC6O95255 1503 aa11.36□□□□□ -0.59
PSEN1-223ENST00000557511 C11orf95C9JLR9 678 aaPredicted RBP11.36□□□□□ -0.59
PSEN1-223ENST00000557511 CCDC125Q86Z20 511 aa11.36□□□□□ -0.59
PSEN1-223ENST00000557511 ANKRD24Q8TF21 1146 aa11.36□□□□□ -0.59
PSEN1-223ENST00000557511 LTV1Q96GA3 475 aaPredicted RBP11.36□□□□□ -0.59
PSEN1-223ENST00000557511 CARD10Q9BWT7 1032 aa11.36□□□□□ -0.59
PSEN1-223ENST00000557511 NSD2O96028 1365 aa11.36□□□□□ -0.59
PSEN1-223ENST00000557511 MAP3K19Q56UN5 1328 aa11.35□□□□□ -0.59
PSEN1-223ENST00000557511 PPM1GO15355 546 aaPredicted RBP11.35□□□□□ -0.59
PSEN1-223ENST00000557511 RRS1Q15050 365 aaKnown RBP11.35□□□□□ -0.59
PSEN1-223ENST00000557511 MORC1Q86VD1 984 aa11.35□□□□□ -0.59
PSEN1-223ENST00000557511 UPF1Q92900 1129 aaKnown RBP eCLIP11.35□□□□□ -0.59
PSEN1-223ENST00000557511 RTL1A6NKG5 1358 aa11.35□□□□□ -0.59
PSEN1-223ENST00000557511 CCDC7Q96M83 1385 aa11.35□□□□□ -0.59
PSEN1-223ENST00000557511 MYOM1P52179 1685 aa11.35□□□□□ -0.59
PSEN1-223ENST00000557511 USP54Q70EL1 1684 aa11.35□□□□□ -0.59
PSEN1-223ENST00000557511 LMO7Q8WWI1 1683 aa11.35□□□□□ -0.59
PSEN1-223ENST00000557511 ERBB3P21860 1342 aa11.35□□□□□ -0.59
PSEN1-223ENST00000557511 HOXC9P31274 260 aa11.34□□□□□ -0.59
PSEN1-223ENST00000557511 DDB1Q16531 1140 aa11.34□□□□□ -0.59
PSEN1-223ENST00000557511 IFNL1Q8IU54 200 aa11.34□□□□□ -0.59
PSEN1-223ENST00000557511 KIF24Q5T7B8 1368 aa11.33□□□□□ -0.6
PSEN1-223ENST00000557511 EXOC5O00471 708 aa11.33□□□□□ -0.6
PSEN1-223ENST00000557511 ECM2O94769 699 aaPredicted RBP11.33□□□□□ -0.6
PSEN1-223ENST00000557511 TNNT2P45379 298 aaPredicted RBP11.33□□□□□ -0.6
PSEN1-223ENST00000557511 ZNF467Q7Z7K2 595 aaPredicted RBP11.33□□□□□ -0.6
PSEN1-223ENST00000557511 FLT4P35916 1363 aa11.32□□□□□ -0.6
PSEN1-223ENST00000557511 FAM196AQ6ZSG2 479 aa11.32□□□□□ -0.6
PSEN1-223ENST00000557511 PCDHB8Q9UN66 801 aa11.32□□□□□ -0.6
PSEN1-223ENST00000557511 KIF20BQ96Q89 1820 aa11.32□□□□□ -0.6
PSEN1-223ENST00000557511 WASHC2AQ641Q2 1341 aa11.32□□□□□ -0.6
PSEN1-223ENST00000557511 IL2RBP14784 551 aa11.31□□□□□ -0.6
PSEN1-223ENST00000557511 FBLN1P23142 703 aa11.31□□□□□ -0.6
PSEN1-223ENST00000557511 EMILIN1Q9Y6C2 1016 aa11.3□□□□□ -0.6
PSEN1-223ENST00000557511 INSRP06213 1382 aa11.29□□□□□ -0.6
PSEN1-223ENST00000557511 LTN1O94822 1766 aa11.29□□□□□ -0.6
PSEN1-223ENST00000557511 COL18A1P39060 1754 aa11.29□□□□□ -0.6
PSEN1-223ENST00000557511 CNGB1Q14028 1251 aaPredicted RBP11.29□□□□□ -0.6
PSEN1-223ENST00000557511 CC2D1BQ5T0F9 858 aaKnown RBP11.29□□□□□ -0.6
PSEN1-223ENST00000557511 RAPGEF4Q8WZA2 1011 aa11.29□□□□□ -0.6
PSEN1-223ENST00000557511 BAG6P46379 1132 aa11.28□□□□□ -0.6
PSEN1-223ENST00000557511 HSP90AB2PQ58FF8 381 aa11.28□□□□□ -0.6
PSEN1-223ENST00000557511 POLKQ9UBT6 870 aa11.28□□□□□ -0.6
PSEN1-223ENST00000557511 TATP17735 454 aaPredicted RBP11.27□□□□□ -0.61
PSEN1-223ENST00000557511 FAM182BQ5T319 152 aa11.27□□□□□ -0.61
PSEN1-223ENST00000557511 TRPC6Q9Y210 931 aa11.27□□□□□ -0.61
PSEN1-223ENST00000557511 THSD7AQ9UPZ6 1657 aa11.27□□□□□ -0.61
PSEN1-223ENST00000557511 OVOS2A0A0G2JMS6 1433 aa11.26□□□□□ -0.61
PSEN1-223ENST00000557511 AMER1Q5JTC6 1135 aaPredicted RBP11.26□□□□□ -0.61
PSEN1-223ENST00000557511 FAM208AQ9UK61 1670 aaKnown RBP11.25□□□□□ -0.61
PSEN1-223ENST00000557511 TRIM37O94972 964 aa11.25□□□□□ -0.61
PSEN1-223ENST00000557511 TIE1P35590 1138 aa11.25□□□□□ -0.61
PSEN1-223ENST00000557511 NBPF6Q5VWK0 638 aa11.25□□□□□ -0.61
PSEN1-223ENST00000557511 NBPF4Q96M43 638 aa11.25□□□□□ -0.61
PSEN1-223ENST00000557511 RGPD5Q99666 1765 aa11.24□□□□□ -0.61
PSEN1-223ENST00000557511 PER1O15534 1290 aaPredicted RBP11.24□□□□□ -0.61
PSEN1-223ENST00000557511 USHBP1Q8N6Y0 703 aa11.24□□□□□ -0.61
PSEN1-223ENST00000557511 ZCRB1Q8TBF4 217 aaKnown RBP11.24□□□□□ -0.61
PSEN1-223ENST00000557511 DDX54Q8TDD1 881 aaKnown RBP11.24□□□□□ -0.61
PSEN1-223ENST00000557511 TMEM106CQ9BVX2 250 aa11.24□□□□□ -0.61
PSEN1-223ENST00000557511 NPC1L1Q9UHC9 1359 aa11.24□□□□□ -0.61
PSEN1-223ENST00000557511 ANKRD26Q9UPS8 1709 aa11.23□□□□□ -0.61
PSEN1-223ENST00000557511 BRWD3Q6RI45 1802 aa11.23□□□□□ -0.61
PSEN1-223ENST00000557511 APBA3O96018 575 aa11.23□□□□□ -0.61
PSEN1-223ENST00000557511 CFAP53Q96M91 514 aa11.23□□□□□ -0.61
PSEN1-223ENST00000557511 BMP2KQ9NSY1 1161 aaPredicted RBP11.23□□□□□ -0.61
PSEN1-223ENST00000557511 DISP2A7MBM2 1401 aa11.23□□□□□ -0.61
PSEN1-223ENST00000557511 TNS2Q63HR2 1409 aa11.23□□□□□ -0.61
PSEN1-223ENST00000557511 PARP4Q9UKK3 1724 aaKnown RBP11.23□□□□□ -0.61
PSEN1-223ENST00000557511 RIOK3O14730 519 aaKnown RBP11.22□□□□□ -0.61
PSEN1-223ENST00000557511 ATMINO43313 823 aaPredicted RBP11.22□□□□□ -0.61
PSEN1-223ENST00000557511 POTEIP0CG38 1075 aa11.22□□□□□ -0.61
PSEN1-223ENST00000557511 EIF4A2Q14240 407 aaKnown RBP11.22□□□□□ -0.61
PSEN1-223ENST00000557511 MARCH10Q8NA82 808 aaPredicted RBP11.22□□□□□ -0.61
PSEN1-223ENST00000557511 SPG7Q9UQ90 795 aa11.22□□□□□ -0.61
PSEN1-223ENST00000557511 PSEN1P49768 467 aa11.21□□□□□ -0.61
PSEN1-223ENST00000557511 MTHFSP49914 203 aa11.21□□□□□ -0.61
PSEN1-223ENST00000557511 PDAP1Q13442 181 aaKnown RBP11.21□□□□□ -0.61
PSEN1-223ENST00000557511 ASTLQ6HA08 431 aaPredicted RBP11.21□□□□□ -0.61
PSEN1-223ENST00000557511 EYA1Q99502 592 aa11.21□□□□□ -0.61
PSEN1-223ENST00000557511 TAOK2Q9UL54 1235 aa11.21□□□□□ -0.61
PSEN1-223ENST00000557511 LRRC37A3O60309 1634 aa11.2□□□□□ -0.62
PSEN1-223ENST00000557511 PCDH11XQ9BZA7 1347 aa11.2□□□□□ -0.62
PSEN1-223ENST00000557511 PCDH11YQ9BZA8 1340 aa11.2□□□□□ -0.62
PSEN1-223ENST00000557511 TTLL13PA6NNM8 815 aa11.2□□□□□ -0.62
PSEN1-223ENST00000557511 DEFB132Q7Z7B7 95 aa11.2□□□□□ -0.62
PSEN1-223ENST00000557511 BCL11BQ9C0K0 894 aaPredicted RBP11.2□□□□□ -0.62
PSEN1-223ENST00000557511 PEAK1Q9H792 1746 aa11.19□□□□□ -0.62
PSEN1-223ENST00000557511 DIAPH1O60610 1272 aaKnown RBP11.19□□□□□ -0.62
PSEN1-223ENST00000557511 ATN1P54259 1190 aaPredicted RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms